RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 IGHA1P01876 353 aa8.2□□□□□ -1.1
VPS26A-208ENST00000497022 SLURP2P0DP57 97 aa8.2□□□□□ -1.1
VPS26A-208ENST00000497022 Q6ZVU0 165 aa8.2□□□□□ -1.1
VPS26A-208ENST00000497022 CCDC155Q8N6L0 562 aa8.2□□□□□ -1.1
VPS26A-208ENST00000497022 PGPEP1Q9NXJ5 209 aa8.2□□□□□ -1.1
VPS26A-208ENST00000497022 DNMT3AQ9Y6K1 912 aaPredicted RBP8.2□□□□□ -1.1
VPS26A-208ENST00000497022 HELBQ8NG08 1087 aaPredicted RBP8.19□□□□□ -1.1
VPS26A-208ENST00000497022 SLC24A3Q9HC58 644 aa8.19□□□□□ -1.1
VPS26A-208ENST00000497022 MAGEB6P1A0A0J9YX57 407 aa8.18□□□□□ -1.1
VPS26A-208ENST00000497022 SLC35F4A4IF30 521 aa8.18□□□□□ -1.1
VPS26A-208ENST00000497022 KANK3Q6NY19 840 aa8.18□□□□□ -1.1
VPS26A-208ENST00000497022 TSC1Q92574 1164 aa8.18□□□□□ -1.1
VPS26A-208ENST00000497022 NUTM2BA6NNL0 878 aaPredicted RBP8.17□□□□□ -1.1
VPS26A-208ENST00000497022 NUTM2EB1AL46 878 aaPredicted RBP8.17□□□□□ -1.1
VPS26A-208ENST00000497022 LILRB3O75022 631 aa8.17□□□□□ -1.1
VPS26A-208ENST00000497022 FOXK2Q01167 660 aa8.17□□□□□ -1.1
VPS26A-208ENST00000497022 CSPP1Q1MSJ5 1256 aa8.17□□□□□ -1.1
VPS26A-208ENST00000497022 RNFT1Q5M7Z0 435 aa8.17□□□□□ -1.1
VPS26A-208ENST00000497022 PPP1R26Q5T8A7 1209 aaPredicted RBP8.17□□□□□ -1.1
VPS26A-208ENST00000497022 NUTM2DQ5VT03 806 aaPredicted RBP8.17□□□□□ -1.1
VPS26A-208ENST00000497022 NUTM2AQ8IVF1 878 aaPredicted RBP8.17□□□□□ -1.1
VPS26A-208ENST00000497022 CDV3Q9UKY7 258 aaKnown RBP8.17□□□□□ -1.1
VPS26A-208ENST00000497022 FIGNL2A6NMB9 653 aa8.16□□□□□ -1.1
VPS26A-208ENST00000497022 ARHGEF15O94989 841 aa8.16□□□□□ -1.1
VPS26A-208ENST00000497022 ITGA6P23229 1130 aa8.16□□□□□ -1.1
VPS26A-208ENST00000497022 ERFEQ4G0M1 354 aa8.16□□□□□ -1.1
VPS26A-208ENST00000497022 DHX9Q08211 1270 aaKnown RBP8.15□□□□□ -1.1
VPS26A-208ENST00000497022 QPCTQ16769 361 aa8.15□□□□□ -1.1
VPS26A-208ENST00000497022 MYSM1Q5VVJ2 828 aa8.15□□□□□ -1.1
VPS26A-208ENST00000497022 SV2AQ7L0J3 742 aa8.15□□□□□ -1.1
VPS26A-208ENST00000497022 LIMD1Q9UGP4 676 aa8.15□□□□□ -1.1
VPS26A-208ENST00000497022 PDE4DQ08499 809 aa8.14□□□□□ -1.11
VPS26A-208ENST00000497022 CBLBQ13191 982 aa8.14□□□□□ -1.11
VPS26A-208ENST00000497022 SCARF2Q96GP6 870 aaPredicted RBP8.14□□□□□ -1.11
VPS26A-208ENST00000497022 CARD14Q9BXL6 1004 aa8.14□□□□□ -1.11
VPS26A-208ENST00000497022 IRS1P35568 1242 aa8.13□□□□□ -1.11
VPS26A-208ENST00000497022 GPAT2Q6NUI2 795 aa8.13□□□□□ -1.11
VPS26A-208ENST00000497022 MARSP56192 900 aaKnown RBP8.12□□□□□ -1.11
VPS26A-208ENST00000497022 PDXDC2PQ6P474 469 aa8.12□□□□□ -1.11
VPS26A-208ENST00000497022 VWA5B2Q8N398 1253 aa8.12□□□□□ -1.11
VPS26A-208ENST00000497022 WHAMMQ8TF30 809 aa8.12□□□□□ -1.11
VPS26A-208ENST00000497022 SLC10A4Q96EP9 437 aa8.12□□□□□ -1.11
VPS26A-208ENST00000497022 CDC14CA4D256 554 aa8.11□□□□□ -1.11
VPS26A-208ENST00000497022 KCTD15Q96SI1 283 aaPredicted RBP8.11□□□□□ -1.11
VPS26A-208ENST00000497022 ARHGAP9Q9BRR9 750 aa8.1□□□□□ -1.11
VPS26A-208ENST00000497022 ZC3H4Q9UPT8 1303 aaKnown RBP8.09□□□□□ -1.11
VPS26A-208ENST00000497022 CTSOP43234 321 aaPredicted RBP8.09□□□□□ -1.11
VPS26A-208ENST00000497022 SRSF11Q05519 484 aaKnown RBP8.09□□□□□ -1.11
VPS26A-208ENST00000497022 ADAMTS2O95450 1211 aa8.08□□□□□ -1.12
VPS26A-208ENST00000497022 CLK2P49760 499 aaKnown RBP8.08□□□□□ -1.12
VPS26A-208ENST00000497022 MAP3K10Q02779 954 aa8.08□□□□□ -1.12
VPS26A-208ENST00000497022 RTL5Q5HYW3 569 aaPredicted RBP8.08□□□□□ -1.12
VPS26A-208ENST00000497022 RNF217Q8TC41 542 aa8.08□□□□□ -1.12
VPS26A-208ENST00000497022 INSM2Q96T92 566 aaPredicted RBP8.08□□□□□ -1.12
VPS26A-208ENST00000497022 SENP3-EIF4A1A0A087X0R7 540 aa8.07□□□□□ -1.12
VPS26A-208ENST00000497022 INTS6LQ5JSJ4 861 aaKnown RBP8.07□□□□□ -1.12
VPS26A-208ENST00000497022 POLMQ9NP87 494 aaPredicted RBP8.07□□□□□ -1.12
VPS26A-208ENST00000497022 FKBPLQ9UIM3 349 aa8.07□□□□□ -1.12
VPS26A-208ENST00000497022 RELBQ01201 579 aa8.06□□□□□ -1.12
VPS26A-208ENST00000497022 ZBTB33Q86T24 672 aa8.06□□□□□ -1.12
VPS26A-208ENST00000497022 AGBL1Q96MI9 1066 aa8.06□□□□□ -1.12
VPS26A-208ENST00000497022 ENAMQ9NRM1 1142 aa8.05□□□□□ -1.12
VPS26A-208ENST00000497022 GPSM3Q9Y4H4 160 aa8.05□□□□□ -1.12
VPS26A-208ENST00000497022 NBPF20Q3BBV1 942 aa8.04□□□□□ -1.12
VPS26A-208ENST00000497022 LYPD4Q6UWN0 246 aa8.04□□□□□ -1.12
VPS26A-208ENST00000497022 RSPH6AQ9H0K4 717 aa8.04□□□□□ -1.12
VPS26A-208ENST00000497022 ADH1AP07327 375 aa8.03□□□□□ -1.12
VPS26A-208ENST00000497022 CELA2BP08218 269 aaPredicted RBP8.03□□□□□ -1.12
VPS26A-208ENST00000497022 GMCL1Q96IK5 515 aa8.03□□□□□ -1.12
VPS26A-208ENST00000497022 PHF20L1A8MW92 1017 aa8.02□□□□□ -1.13
VPS26A-208ENST00000497022 PTK2Q05397 1052 aa8.02□□□□□ -1.13
VPS26A-208ENST00000497022 CTDSPL2Q05D32 466 aa8.02□□□□□ -1.13
VPS26A-208ENST00000497022 GAS6Q14393 721 aa8.02□□□□□ -1.13
VPS26A-208ENST00000497022 FOXD4L5Q5VV16 416 aaPredicted RBP8.02□□□□□ -1.13
VPS26A-208ENST00000497022 ZNF395Q9H8N7 513 aaPredicted RBP8.01□□□□□ -1.13
VPS26A-208ENST00000497022 MSTNO14793 375 aa8□□□□□ -1.13
VPS26A-208ENST00000497022 LYSMD3Q7Z3D4 306 aa8□□□□□ -1.13
VPS26A-208ENST00000497022 ZNF784Q8NCA9 323 aaPredicted RBP8□□□□□ -1.13
VPS26A-208ENST00000497022 TRIM52Q96A61 297 aa8□□□□□ -1.13
VPS26A-208ENST00000497022 GPBP1L1Q9HC44 474 aaPredicted RBP8□□□□□ -1.13
VPS26A-208ENST00000497022 MBIPQ9NS73 344 aa8□□□□□ -1.13
VPS26A-208ENST00000497022 PTGIRP43119 386 aa7.99□□□□□ -1.13
VPS26A-208ENST00000497022 ADAM32Q8TC27 787 aa7.99□□□□□ -1.13
VPS26A-208ENST00000497022 LRRN4Q8WUT4 740 aa7.99□□□□□ -1.13
VPS26A-208ENST00000497022 OCSTAMPQ9BR26 566 aa7.99□□□□□ -1.13
VPS26A-208ENST00000497022 KDM4CQ9H3R0 1056 aa7.99□□□□□ -1.13
VPS26A-208ENST00000497022 PLA2G4EQ3MJ16 856 aa7.98□□□□□ -1.13
VPS26A-208ENST00000497022 DCAF5Q96JK2 942 aa7.98□□□□□ -1.13
VPS26A-208ENST00000497022 TMPRSS4Q9NRS4 437 aa7.98□□□□□ -1.13
VPS26A-208ENST00000497022 LILRA1O75019 489 aa7.97□□□□□ -1.13
VPS26A-208ENST00000497022 ADAM23O75077 832 aa7.97□□□□□ -1.13
VPS26A-208ENST00000497022 NR6A1Q15406 480 aa7.97□□□□□ -1.13
VPS26A-208ENST00000497022 FOXR1Q6PIV2 292 aa7.97□□□□□ -1.13
VPS26A-208ENST00000497022 PODNQ7Z5L7 613 aa7.97□□□□□ -1.13
VPS26A-208ENST00000497022 TRIM22Q8IYM9 498 aa7.97□□□□□ -1.13
VPS26A-208ENST00000497022 BEND7Q8N7W2 519 aaPredicted RBP7.97□□□□□ -1.13
VPS26A-208ENST00000497022 PNMA1Q8ND90 353 aa7.97□□□□□ -1.13
VPS26A-208ENST00000497022 ZNF837Q96EG3 531 aaPredicted RBP7.97□□□□□ -1.13
VPS26A-208ENST00000497022 CUEDC1Q9NWM3 386 aaPredicted RBP7.97□□□□□ -1.13
VPS26A-208ENST00000497022 RNF144AP50876 292 aaPredicted RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms