RNA–Protein interactions for RNA: ENST00000496659.1

C4A-258, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-258ENST00000496659 RGS12O14924 1447 aa13.38□□□□□ -0.27
C4A-258ENST00000496659 AMPHP49418 695 aa13.37□□□□□ -0.27
C4A-258ENST00000496659 PPM1GO15355 546 aaPredicted RBP13.36□□□□□ -0.27
C4A-258ENST00000496659 PLEKHG5O94827 1062 aa13.36□□□□□ -0.27
C4A-258ENST00000496659 POLKQ9UBT6 870 aa13.36□□□□□ -0.27
C4A-258ENST00000496659 MAP3K19Q56UN5 1328 aa13.36□□□□□ -0.27
C4A-258ENST00000496659 LTN1O94822 1766 aa13.35□□□□□ -0.27
C4A-258ENST00000496659 CPDO75976 1380 aa13.35□□□□□ -0.27
C4A-258ENST00000496659 INSRP06213 1382 aa13.35□□□□□ -0.27
C4A-258ENST00000496659 RRS1Q15050 365 aaKnown RBP13.35□□□□□ -0.27
C4A-258ENST00000496659 WDR43Q15061 677 aaKnown RBP eCLIP13.35□□□□□ -0.27
C4A-258ENST00000496659 CABLES1Q8TDN4 633 aa13.35□□□□□ -0.27
C4A-258ENST00000496659 NUDCQ9Y266 331 aa13.35□□□□□ -0.27
C4A-258ENST00000496659 EMILIN1Q9Y6C2 1016 aa13.35□□□□□ -0.27
C4A-258ENST00000496659 BCL9LQ86UU0 1499 aa13.35□□□□□ -0.27
C4A-258ENST00000496659 MAP2P11137 1827 aaKnown RBP13.34□□□□□ -0.27
C4A-258ENST00000496659 ATRNO75882 1429 aa13.34□□□□□ -0.27
C4A-258ENST00000496659 BLMP54132 1417 aaPredicted RBP13.34□□□□□ -0.27
C4A-258ENST00000496659 TRPC5Q9UL62 973 aaPredicted RBP13.34□□□□□ -0.27
C4A-258ENST00000496659 ZBTB7CA1YPR0 619 aa13.33□□□□□ -0.28
C4A-258ENST00000496659 ARHGEF25Q86VW2 580 aa13.33□□□□□ -0.28
C4A-258ENST00000496659 COL3A1P02461 1466 aaPredicted RBP13.33□□□□□ -0.28
C4A-258ENST00000496659 DIAPH1O60610 1272 aaKnown RBP13.32□□□□□ -0.28
C4A-258ENST00000496659 PEAK1Q9H792 1746 aa13.32□□□□□ -0.28
C4A-258ENST00000496659 HOXC9P31274 260 aa13.31□□□□□ -0.28
C4A-258ENST00000496659 ZC3H6P61129 1189 aaKnown RBP13.31□□□□□ -0.28
C4A-258ENST00000496659 IP6K1Q92551 441 aa13.31□□□□□ -0.28
C4A-258ENST00000496659 PRDM11Q9NQV5 511 aa13.31□□□□□ -0.28
C4A-258ENST00000496659 KIAA0232Q92628 1395 aa13.31□□□□□ -0.28
C4A-258ENST00000496659 FBLN1P23142 703 aa13.3□□□□□ -0.28
C4A-258ENST00000496659 COL14A1Q05707 1796 aaKnown RBP13.3□□□□□ -0.28
C4A-258ENST00000496659 CCDC184Q52MB2 194 aa13.29□□□□□ -0.28
C4A-258ENST00000496659 UNC5CLQ8IV45 518 aa13.29□□□□□ -0.28
C4A-258ENST00000496659 GJD4Q96KN9 370 aaPredicted RBP13.29□□□□□ -0.28
C4A-258ENST00000496659 SLIT2O94813 1529 aa13.29□□□□□ -0.28
C4A-258ENST00000496659 FAM208AQ9UK61 1670 aaKnown RBP13.28□□□□□ -0.28
C4A-258ENST00000496659 FAM9BQ8IZU0 186 aa13.28□□□□□ -0.28
C4A-258ENST00000496659 PNISRQ8TF01 805 aaKnown RBP13.28□□□□□ -0.28
C4A-258ENST00000496659 PNNQ9H307 717 aaKnown RBP13.28□□□□□ -0.28
C4A-258ENST00000496659 FAM83GA6ND36 823 aa13.27□□□□□ -0.29
C4A-258ENST00000496659 U2SURPO15042 1029 aaKnown RBP13.27□□□□□ -0.29
C4A-258ENST00000496659 HSP90AB2PQ58FF8 381 aa13.27□□□□□ -0.29
C4A-258ENST00000496659 LMO7Q8WWI1 1683 aa13.27□□□□□ -0.29
C4A-258ENST00000496659 NEFMP07197 916 aa13.26□□□□□ -0.29
C4A-258ENST00000496659 U2AF1L5P0DN76 240 aaPredicted RBP13.26□□□□□ -0.29
C4A-258ENST00000496659 IL13P35225 146 aa13.26□□□□□ -0.29
C4A-258ENST00000496659 U2AF1Q01081 240 aaKnown RBP eCLIP13.26□□□□□ -0.29
C4A-258ENST00000496659 EIF4A2Q14240 407 aaKnown RBP13.26□□□□□ -0.29
C4A-258ENST00000496659 COL18A1P39060 1754 aa13.25□□□□□ -0.29
C4A-258ENST00000496659 ERBB3P21860 1342 aa13.25□□□□□ -0.29
C4A-258ENST00000496659 ANKRD24Q8TF21 1146 aa13.25□□□□□ -0.29
C4A-258ENST00000496659 GLI3P10071 1580 aa13.24□□□□□ -0.29
C4A-258ENST00000496659 CSB-PGBD3P0DP91 1061 aa13.24□□□□□ -0.29
C4A-258ENST00000496659 CHRNA2Q15822 529 aa13.24□□□□□ -0.29
C4A-258ENST00000496659 RGPD1P0DJD0 1748 aa13.24□□□□□ -0.29
C4A-258ENST00000496659 COL5A2P05997 1499 aaPredicted RBP13.23□□□□□ -0.29
C4A-258ENST00000496659 IGSF1Q8N6C5 1336 aa13.23□□□□□ -0.29
C4A-258ENST00000496659 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.23□□□□□ -0.29
C4A-258ENST00000496659 LTV1Q96GA3 475 aaPredicted RBP13.23□□□□□ -0.29
C4A-258ENST00000496659 PLCH1Q4KWH8 1693 aa13.23□□□□□ -0.29
C4A-258ENST00000496659 NWD2Q9ULI1 1742 aa13.22□□□□□ -0.29
C4A-258ENST00000496659 CAMTA1Q9Y6Y1 1673 aa13.22□□□□□ -0.29
C4A-258ENST00000496659 MAPK8IP3Q9UPT6 1336 aa13.22□□□□□ -0.29
C4A-258ENST00000496659 EVA1CP58658 441 aa13.22□□□□□ -0.29
C4A-258ENST00000496659 VPS72Q15906 364 aa13.22□□□□□ -0.29
C4A-258ENST00000496659 ADAMTS8Q9UP79 889 aa13.22□□□□□ -0.29
C4A-258ENST00000496659 BRWD3Q6RI45 1802 aa13.22□□□□□ -0.29
C4A-258ENST00000496659 WDR17Q8IZU2 1322 aa13.21□□□□□ -0.29
C4A-258ENST00000496659 FCHSD2O94868 740 aa13.21□□□□□ -0.29
C4A-258ENST00000496659 KDRP35968 1356 aa13.2□□□□□ -0.3
C4A-258ENST00000496659 PLEKHG2Q9H7P9 1386 aa13.2□□□□□ -0.3
C4A-258ENST00000496659 SEPT12Q8IYM1 358 aa13.2□□□□□ -0.3
C4A-258ENST00000496659 RUNDC1Q96C34 613 aa13.2□□□□□ -0.3
C4A-258ENST00000496659 BTG4Q9NY30 223 aa13.2□□□□□ -0.3
C4A-258ENST00000496659 AXIN2Q9Y2T1 843 aa13.2□□□□□ -0.3
C4A-258ENST00000496659 RGPD5Q99666 1765 aa13.2□□□□□ -0.3
C4A-258ENST00000496659 ONECUT3O60422 494 aaPredicted RBP13.19□□□□□ -0.3
C4A-258ENST00000496659 SULT6B1Q6IMI4 303 aa13.19□□□□□ -0.3
C4A-258ENST00000496659 TOM1L2Q6ZVM7 507 aa13.19□□□□□ -0.3
C4A-258ENST00000496659 EYA1Q99502 592 aa13.19□□□□□ -0.3
C4A-258ENST00000496659 NLRP2Q9NX02 1062 aa13.19□□□□□ -0.3
C4A-258ENST00000496659 CCDC9Q9Y3X0 531 aaKnown RBP13.19□□□□□ -0.3
C4A-258ENST00000496659 CRB1P82279 1406 aa13.19□□□□□ -0.3
C4A-258ENST00000496659 NCAPD2Q15021 1401 aa13.19□□□□□ -0.3
C4A-258ENST00000496659 NRAPQ86VF7 1730 aa13.19□□□□□ -0.3
C4A-258ENST00000496659 HMOX1P09601 288 aa13.18□□□□□ -0.3
C4A-258ENST00000496659 PRKAR2BP31323 418 aa13.18□□□□□ -0.3
C4A-258ENST00000496659 NGEFQ8N5V2 710 aa13.18□□□□□ -0.3
C4A-258ENST00000496659 RSPH6AQ9H0K4 717 aa13.18□□□□□ -0.3
C4A-258ENST00000496659 STRN4Q9NRL3 753 aa13.18□□□□□ -0.3
C4A-258ENST00000496659 HNRNPUQ00839 825 aaKnown RBP eCLIP13.17□□□□□ -0.3
C4A-258ENST00000496659 EP400Q96L91 3159 aa13.16□□□□□ -0.3
C4A-258ENST00000496659 NBPF6Q5VWK0 638 aa13.16□□□□□ -0.3
C4A-258ENST00000496659 CCDC146Q8IYE0 955 aa13.16□□□□□ -0.3
C4A-258ENST00000496659 RAPGEF4Q8WZA2 1011 aa13.16□□□□□ -0.3
C4A-258ENST00000496659 NBPF4Q96M43 638 aa13.16□□□□□ -0.3
C4A-258ENST00000496659 YTHDC1Q96MU7 727 aaKnown RBP13.16□□□□□ -0.3
C4A-258ENST00000496659 CARD10Q9BWT7 1032 aa13.16□□□□□ -0.3
C4A-258ENST00000496659 FAM98CQ17RN3 349 aaKnown RBP13.15□□□□□ -0.3
C4A-258ENST00000496659 PARP4Q9UKK3 1724 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms