RNA–Protein interactions for RNA: ENST00000496327.1

CNOT3-207, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-207ENST00000496327 SPATA31A7Q8IWB4 1347 aa22.9■■□□□ 1.26
CNOT3-207ENST00000496327 AXIN2Q9Y2T1 843 aa22.9■■□□□ 1.26
CNOT3-207ENST00000496327 ABCC6O95255 1503 aa22.9■■□□□ 1.26
CNOT3-207ENST00000496327 RGS12O14924 1447 aa22.89■■□□□ 1.25
CNOT3-207ENST00000496327 KIF20BQ96Q89 1820 aa22.89■■□□□ 1.25
CNOT3-207ENST00000496327 MAP3K19Q56UN5 1328 aa22.88■■□□□ 1.25
CNOT3-207ENST00000496327 LARP1Q6PKG0 1096 aaKnown RBP22.88■■□□□ 1.25
CNOT3-207ENST00000496327 GLI3P10071 1580 aa22.88■■□□□ 1.25
CNOT3-207ENST00000496327 SPATA31A1Q5TZJ5 1347 aa22.87■■□□□ 1.25
CNOT3-207ENST00000496327 FBLN1P23142 703 aa22.87■■□□□ 1.25
CNOT3-207ENST00000496327 IP6K1Q92551 441 aa22.86■■□□□ 1.25
CNOT3-207ENST00000496327 COL18A1P39060 1754 aa22.86■■□□□ 1.25
CNOT3-207ENST00000496327 AMPHP49418 695 aa22.85■■□□□ 1.25
CNOT3-207ENST00000496327 RRS1Q15050 365 aaKnown RBP22.85■■□□□ 1.25
CNOT3-207ENST00000496327 WDR17Q8IZU2 1322 aa22.84■■□□□ 1.25
CNOT3-207ENST00000496327 PER1O15534 1290 aaPredicted RBP22.84■■□□□ 1.25
CNOT3-207ENST00000496327 CSB-PGBD3P0DP91 1061 aa22.84■■□□□ 1.25
CNOT3-207ENST00000496327 AMER1Q5JTC6 1135 aaPredicted RBP22.84■■□□□ 1.25
CNOT3-207ENST00000496327 RTL1A6NKG5 1358 aa22.84■■□□□ 1.25
CNOT3-207ENST00000496327 BLMP54132 1417 aaPredicted RBP22.83■■□□□ 1.25
CNOT3-207ENST00000496327 CRB1P82279 1406 aa22.83■■□□□ 1.25
CNOT3-207ENST00000496327 FAM98CQ17RN3 349 aaKnown RBP22.83■■□□□ 1.25
CNOT3-207ENST00000496327 TOM1L2Q6ZVM7 507 aa22.83■■□□□ 1.25
CNOT3-207ENST00000496327 ONECUT3O60422 494 aaPredicted RBP22.82■■□□□ 1.24
CNOT3-207ENST00000496327 HOXC9P31274 260 aa22.82■■□□□ 1.24
CNOT3-207ENST00000496327 TCP11L2Q8N4U5 519 aa22.82■■□□□ 1.24
CNOT3-207ENST00000496327 USP35Q9P2H5 1018 aa22.82■■□□□ 1.24
CNOT3-207ENST00000496327 ERBB3P21860 1342 aa22.82■■□□□ 1.24
CNOT3-207ENST00000496327 KIF24Q5T7B8 1368 aa22.81■■□□□ 1.24
CNOT3-207ENST00000496327 MORC1Q86VD1 984 aa22.81■■□□□ 1.24
CNOT3-207ENST00000496327 SEPT12Q8IYM1 358 aa22.81■■□□□ 1.24
CNOT3-207ENST00000496327 A0A0G2JS52 829 aa22.8■■□□□ 1.24
CNOT3-207ENST00000496327 MYT1Q01538 1121 aa22.8■■□□□ 1.24
CNOT3-207ENST00000496327 ANKRD24Q8TF21 1146 aa22.8■■□□□ 1.24
CNOT3-207ENST00000496327 THRAP3Q9Y2W1 955 aaKnown RBP22.8■■□□□ 1.24
CNOT3-207ENST00000496327 TNNT2P45379 298 aaPredicted RBP22.79■■□□□ 1.24
CNOT3-207ENST00000496327 BARGINQ6ZT62 677 aa22.79■■□□□ 1.24
CNOT3-207ENST00000496327 LTN1O94822 1766 aa22.78■■□□□ 1.24
CNOT3-207ENST00000496327 FLT4P35916 1363 aa22.78■■□□□ 1.24
CNOT3-207ENST00000496327 NPC1L1Q9UHC9 1359 aa22.78■■□□□ 1.24
CNOT3-207ENST00000496327 SOCS7O14512 581 aa22.78■■□□□ 1.24
CNOT3-207ENST00000496327 CARD10Q9BWT7 1032 aa22.78■■□□□ 1.24
CNOT3-207ENST00000496327 EMILIN1Q9Y6C2 1016 aa22.78■■□□□ 1.24
CNOT3-207ENST00000496327 CC2D1BQ5T0F9 858 aaKnown RBP22.76■■□□□ 1.23
CNOT3-207ENST00000496327 LTV1Q96GA3 475 aaPredicted RBP22.76■■□□□ 1.23
CNOT3-207ENST00000496327 POLKQ9UBT6 870 aa22.76■■□□□ 1.23
CNOT3-207ENST00000496327 ANKRD26Q9UPS8 1709 aa22.76■■□□□ 1.23
CNOT3-207ENST00000496327 PPM1GO15355 546 aaPredicted RBP22.75■■□□□ 1.23
CNOT3-207ENST00000496327 NLRP2Q9NX02 1062 aa22.75■■□□□ 1.23
CNOT3-207ENST00000496327 INSRP06213 1382 aa22.75■■□□□ 1.23
CNOT3-207ENST00000496327 HSP90AB2PQ58FF8 381 aa22.74■■□□□ 1.23
CNOT3-207ENST00000496327 SMG6Q86US8 1419 aaKnown RBP22.73■■□□□ 1.23
CNOT3-207ENST00000496327 THSD7AQ9UPZ6 1657 aa22.71■■□□□ 1.23
CNOT3-207ENST00000496327 KRT27Q7Z3Y8 459 aa22.71■■□□□ 1.23
CNOT3-207ENST00000496327 CDCA7Q9BWT1 371 aaPredicted RBP22.71■■□□□ 1.23
CNOT3-207ENST00000496327 PEAK1Q9H792 1746 aa22.7■■□□□ 1.22
CNOT3-207ENST00000496327 RGPD5Q99666 1765 aa22.7■■□□□ 1.22
CNOT3-207ENST00000496327 CNGB1Q14028 1251 aaPredicted RBP22.69■■□□□ 1.22
CNOT3-207ENST00000496327 DISP2A7MBM2 1401 aa22.67■■□□□ 1.22
CNOT3-207ENST00000496327 DDX10Q13206 875 aaKnown RBP22.67■■□□□ 1.22
CNOT3-207ENST00000496327 PDE3BQ13370 1112 aa22.65■■□□□ 1.22
CNOT3-207ENST00000496327 IL2RBP14784 551 aa22.64■■□□□ 1.21
CNOT3-207ENST00000496327 DDB1Q16531 1140 aa22.64■■□□□ 1.21
CNOT3-207ENST00000496327 NBPF6Q5VWK0 638 aa22.64■■□□□ 1.21
CNOT3-207ENST00000496327 NBPF4Q96M43 638 aa22.64■■□□□ 1.21
CNOT3-207ENST00000496327 FAM208AQ9UK61 1670 aaKnown RBP22.64■■□□□ 1.21
CNOT3-207ENST00000496327 ZNF316A6NFI3 1004 aaPredicted RBP22.62■■□□□ 1.21
CNOT3-207ENST00000496327 MTHFSP49914 203 aa22.62■■□□□ 1.21
CNOT3-207ENST00000496327 EIF4A2Q14240 407 aaKnown RBP22.62■■□□□ 1.21
CNOT3-207ENST00000496327 UPF1Q92900 1129 aaKnown RBP eCLIP22.62■■□□□ 1.21
CNOT3-207ENST00000496327 USHBP1Q8N6Y0 703 aa22.6■■□□□ 1.21
CNOT3-207ENST00000496327 PARP4Q9UKK3 1724 aaKnown RBP22.6■■□□□ 1.21
CNOT3-207ENST00000496327 MAP2P11137 1827 aaKnown RBP22.59■■□□□ 1.21
CNOT3-207ENST00000496327 EXOC5O00471 708 aa22.59■■□□□ 1.21
CNOT3-207ENST00000496327 BRWD3Q6RI45 1802 aa22.59■■□□□ 1.21
CNOT3-207ENST00000496327 TNS2Q63HR2 1409 aa22.58■■□□□ 1.21
CNOT3-207ENST00000496327 FAM182BQ5T319 152 aa22.58■■□□□ 1.21
CNOT3-207ENST00000496327 EYA1Q99502 592 aa22.58■■□□□ 1.21
CNOT3-207ENST00000496327 LRRC37A3O60309 1634 aa22.57■■□□□ 1.2
CNOT3-207ENST00000496327 RAPGEF4Q8WZA2 1011 aa22.57■■□□□ 1.2
CNOT3-207ENST00000496327 NCAPD2Q15021 1401 aa22.57■■□□□ 1.2
CNOT3-207ENST00000496327 FAM196AQ6ZSG2 479 aa22.56■■□□□ 1.2
CNOT3-207ENST00000496327 WNK3Q9BYP7 1800 aa22.56■■□□□ 1.2
CNOT3-207ENST00000496327 MEGF6O75095 1541 aa22.55■■□□□ 1.2
CNOT3-207ENST00000496327 PARD3Q8TEW0 1356 aa22.54■■□□□ 1.2
CNOT3-207ENST00000496327 TATP17735 454 aaPredicted RBP22.54■■□□□ 1.2
CNOT3-207ENST00000496327 PPP2R1AP30153 589 aa22.54■■□□□ 1.2
CNOT3-207ENST00000496327 OVOS2A0A0G2JMS6 1433 aa22.54■■□□□ 1.2
CNOT3-207ENST00000496327 IGSF1Q8N6C5 1336 aa22.54■■□□□ 1.2
CNOT3-207ENST00000496327 IL13P35225 146 aa22.53■■□□□ 1.2
CNOT3-207ENST00000496327 CCDC125Q86Z20 511 aa22.53■■□□□ 1.2
CNOT3-207ENST00000496327 MARCH10Q8NA82 808 aaPredicted RBP22.53■■□□□ 1.2
CNOT3-207ENST00000496327 ZCRB1Q8TBF4 217 aaKnown RBP22.51■■□□□ 1.19
CNOT3-207ENST00000496327 DIAPH1O60610 1272 aaKnown RBP22.5■■□□□ 1.19
CNOT3-207ENST00000496327 RALBP1Q15311 655 aa22.5■■□□□ 1.19
CNOT3-207ENST00000496327 CFAP53Q96M91 514 aa22.5■■□□□ 1.19
CNOT3-207ENST00000496327 RGPD2P0DJD1 1756 aa22.5■■□□□ 1.19
CNOT3-207ENST00000496327 SF3B2Q13435 895 aaKnown RBP22.49■■□□□ 1.19
CNOT3-207ENST00000496327 BCL9O00512 1426 aa22.48■■□□□ 1.19
CNOT3-207ENST00000496327 COL3A1P02461 1466 aaPredicted RBP22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms