RNA–Protein interactions for RNA: ENST00000496026.1

HDAC9-226, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 860 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-226ENST00000496026 HOXC9P31274 260 aa20■□□□□ 0.79
HDAC9-226ENST00000496026 POLKQ9UBT6 870 aa20■□□□□ 0.79
HDAC9-226ENST00000496026 RGS17Q9UGC6 210 aaPredicted RBP20■□□□□ 0.79
HDAC9-226ENST00000496026 CAMTA1Q9Y6Y1 1673 aa20■□□□□ 0.79
HDAC9-226ENST00000496026 RTL1A6NKG5 1358 aa19.99■□□□□ 0.79
HDAC9-226ENST00000496026 QTRT2Q9H974 415 aaKnown RBP19.99■□□□□ 0.79
HDAC9-226ENST00000496026 CCDC9Q9Y3X0 531 aaKnown RBP19.99■□□□□ 0.79
HDAC9-226ENST00000496026 ABCC6O95255 1503 aa19.98■□□□□ 0.79
HDAC9-226ENST00000496026 CSB-PGBD3P0DP91 1061 aa19.98■□□□□ 0.79
HDAC9-226ENST00000496026 TRPC5Q9UL62 973 aaPredicted RBP19.98■□□□□ 0.79
HDAC9-226ENST00000496026 LTN1O94822 1766 aa19.98■□□□□ 0.79
HDAC9-226ENST00000496026 LMO7Q8WWI1 1683 aa19.97■□□□□ 0.79
HDAC9-226ENST00000496026 FLT4P35916 1363 aa19.97■□□□□ 0.79
HDAC9-226ENST00000496026 KIF24Q5T7B8 1368 aa19.97■□□□□ 0.79
HDAC9-226ENST00000496026 NWD2Q9ULI1 1742 aa19.97■□□□□ 0.79
HDAC9-226ENST00000496026 BLMP54132 1417 aaPredicted RBP19.97■□□□□ 0.79
HDAC9-226ENST00000496026 VPS72Q15906 364 aa19.96■□□□□ 0.79
HDAC9-226ENST00000496026 ANKRD24Q8TF21 1146 aa19.96■□□□□ 0.79
HDAC9-226ENST00000496026 LTV1Q96GA3 475 aaPredicted RBP19.96■□□□□ 0.79
HDAC9-226ENST00000496026 COL5A2P05997 1499 aaPredicted RBP19.96■□□□□ 0.79
HDAC9-226ENST00000496026 COL18A1P39060 1754 aa19.95■□□□□ 0.78
HDAC9-226ENST00000496026 HSP90AB2PQ58FF8 381 aa19.95■□□□□ 0.78
HDAC9-226ENST00000496026 LARP1Q6PKG0 1096 aaKnown RBP19.95■□□□□ 0.78
HDAC9-226ENST00000496026 ATRNO75882 1429 aa19.94■□□□□ 0.78
HDAC9-226ENST00000496026 MTHFSP49914 203 aa19.94■□□□□ 0.78
HDAC9-226ENST00000496026 RALBP1Q15311 655 aa19.94■□□□□ 0.78
HDAC9-226ENST00000496026 POTEAQ6S8J7 498 aa19.94■□□□□ 0.78
HDAC9-226ENST00000496026 TOM1L2Q6ZVM7 507 aa19.94■□□□□ 0.78
HDAC9-226ENST00000496026 ERBB3P21860 1342 aa19.94■□□□□ 0.78
HDAC9-226ENST00000496026 PARD3Q8TEW0 1356 aa19.94■□□□□ 0.78
HDAC9-226ENST00000496026 WDR17Q8IZU2 1322 aa19.93■□□□□ 0.78
HDAC9-226ENST00000496026 INSRP06213 1382 aa19.93■□□□□ 0.78
HDAC9-226ENST00000496026 NRAPQ86VF7 1730 aa19.93■□□□□ 0.78
HDAC9-226ENST00000496026 SMG6Q86US8 1419 aaKnown RBP19.93■□□□□ 0.78
HDAC9-226ENST00000496026 PPP2R1AP30153 589 aa19.92■□□□□ 0.78
HDAC9-226ENST00000496026 GJD4Q96KN9 370 aaPredicted RBP19.92■□□□□ 0.78
HDAC9-226ENST00000496026 USP35Q9P2H5 1018 aa19.92■□□□□ 0.78
HDAC9-226ENST00000496026 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.92■□□□□ 0.78
HDAC9-226ENST00000496026 PEAK1Q9H792 1746 aa19.91■□□□□ 0.78
HDAC9-226ENST00000496026 RXRBP28702 533 aa19.91■□□□□ 0.78
HDAC9-226ENST00000496026 NLRP2Q9NX02 1062 aa19.91■□□□□ 0.78
HDAC9-226ENST00000496026 CRB1P82279 1406 aa19.91■□□□□ 0.78
HDAC9-226ENST00000496026 RBM6P78332 1123 aaKnown RBP19.9■□□□□ 0.78
HDAC9-226ENST00000496026 SPATA31A5Q5VU36 1347 aa19.9■□□□□ 0.78
HDAC9-226ENST00000496026 SPATA31A7Q8IWB4 1347 aa19.9■□□□□ 0.78
HDAC9-226ENST00000496026 CDK12Q9NYV4 1490 aaPredicted RBP19.9■□□□□ 0.78
HDAC9-226ENST00000496026 MAP2P11137 1827 aaKnown RBP19.9■□□□□ 0.78
HDAC9-226ENST00000496026 ANP32CO43423 234 aa19.89■□□□□ 0.77
HDAC9-226ENST00000496026 SPATA31A1Q5TZJ5 1347 aa19.89■□□□□ 0.77
HDAC9-226ENST00000496026 PRKRIP1Q9H875 184 aaPredicted RBP19.89■□□□□ 0.77
HDAC9-226ENST00000496026 CFAP53Q96M91 514 aa19.88■□□□□ 0.77
HDAC9-226ENST00000496026 RGPD5Q99666 1765 aa19.88■□□□□ 0.77
HDAC9-226ENST00000496026 EIF4A2Q14240 407 aaKnown RBP19.87■□□□□ 0.77
HDAC9-226ENST00000496026 TCP11L2Q8N4U5 519 aa19.87■□□□□ 0.77
HDAC9-226ENST00000496026 CARD10Q9BWT7 1032 aa19.87■□□□□ 0.77
HDAC9-226ENST00000496026 MYBBP1AQ9BQG0 1328 aaKnown RBP19.86■□□□□ 0.77
HDAC9-226ENST00000496026 A0A0G2JS52 829 aa19.85■□□□□ 0.77
HDAC9-226ENST00000496026 MYT1Q01538 1121 aa19.85■□□□□ 0.77
HDAC9-226ENST00000496026 FAM98CQ17RN3 349 aaKnown RBP19.85■□□□□ 0.77
HDAC9-226ENST00000496026 THRAP3Q9Y2W1 955 aaKnown RBP19.85■□□□□ 0.77
HDAC9-226ENST00000496026 NBPF6Q5VWK0 638 aa19.84■□□□□ 0.77
HDAC9-226ENST00000496026 NBPF4Q96M43 638 aa19.84■□□□□ 0.77
HDAC9-226ENST00000496026 DIAPH1O60610 1272 aaKnown RBP19.83■□□□□ 0.77
HDAC9-226ENST00000496026 GLI3P10071 1580 aa19.83■□□□□ 0.76
HDAC9-226ENST00000496026 BARGINQ6ZT62 677 aa19.82■□□□□ 0.76
HDAC9-226ENST00000496026 USHBP1Q8N6Y0 703 aa19.82■□□□□ 0.76
HDAC9-226ENST00000496026 IL13P35225 146 aa19.81■□□□□ 0.76
HDAC9-226ENST00000496026 EYA1Q99502 592 aa19.81■□□□□ 0.76
HDAC9-226ENST00000496026 FAM208AQ9UK61 1670 aaKnown RBP19.81■□□□□ 0.76
HDAC9-226ENST00000496026 ONECUT3O60422 494 aaPredicted RBP19.79■□□□□ 0.76
HDAC9-226ENST00000496026 IL2RBP14784 551 aa19.78■□□□□ 0.76
HDAC9-226ENST00000496026 DIEXFQ68CQ4 756 aaKnown RBP19.78■□□□□ 0.76
HDAC9-226ENST00000496026 SEPT12Q8IYM1 358 aa19.78■□□□□ 0.76
HDAC9-226ENST00000496026 CDCA7Q9BWT1 371 aaPredicted RBP19.78■□□□□ 0.76
HDAC9-226ENST00000496026 NUDCQ9Y266 331 aa19.78■□□□□ 0.76
HDAC9-226ENST00000496026 COL3A1P02461 1466 aaPredicted RBP19.78■□□□□ 0.76
HDAC9-226ENST00000496026 IGSF1Q8N6C5 1336 aa19.77■□□□□ 0.76
HDAC9-226ENST00000496026 U2SURPO15042 1029 aaKnown RBP19.77■□□□□ 0.76
HDAC9-226ENST00000496026 RAPGEF4Q8WZA2 1011 aa19.77■□□□□ 0.76
HDAC9-226ENST00000496026 RGS12O14924 1447 aa19.76■□□□□ 0.75
HDAC9-226ENST00000496026 TATP17735 454 aaPredicted RBP19.74■□□□□ 0.75
HDAC9-226ENST00000496026 SULT6B1Q6IMI4 303 aa19.74■□□□□ 0.75
HDAC9-226ENST00000496026 DISP2A7MBM2 1401 aa19.74■□□□□ 0.75
HDAC9-226ENST00000496026 RGPD2P0DJD1 1756 aa19.73■□□□□ 0.75
HDAC9-226ENST00000496026 HMOX1P09601 288 aa19.73■□□□□ 0.75
HDAC9-226ENST00000496026 DDB1Q16531 1140 aa19.73■□□□□ 0.75
HDAC9-226ENST00000496026 EXOC5O00471 708 aa19.72■□□□□ 0.75
HDAC9-226ENST00000496026 U2AF1L5P0DN76 240 aaPredicted RBP19.72■□□□□ 0.75
HDAC9-226ENST00000496026 U2AF1Q01081 240 aaKnown RBP eCLIP19.72■□□□□ 0.75
HDAC9-226ENST00000496026 NCAPD2Q15021 1401 aa19.72■□□□□ 0.75
HDAC9-226ENST00000496026 AEBP1Q8IUX7 1158 aa19.72■□□□□ 0.75
HDAC9-226ENST00000496026 THSD7AQ9UPZ6 1657 aa19.71■□□□□ 0.75
HDAC9-226ENST00000496026 PDE3BQ13370 1112 aa19.71■□□□□ 0.75
HDAC9-226ENST00000496026 MEGF6O75095 1541 aa19.71■□□□□ 0.75
HDAC9-226ENST00000496026 KRT27Q7Z3Y8 459 aa19.7■□□□□ 0.74
HDAC9-226ENST00000496026 ILDR2Q71H61 639 aa19.69■□□□□ 0.74
HDAC9-226ENST00000496026 OVOS2A0A0G2JMS6 1433 aa19.68■□□□□ 0.74
HDAC9-226ENST00000496026 RGPD1P0DJD0 1748 aa19.68■□□□□ 0.74
HDAC9-226ENST00000496026 ZCRB1Q8TBF4 217 aaKnown RBP19.68■□□□□ 0.74
HDAC9-226ENST00000496026 KDRP35968 1356 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms