RNA–Protein interactions for RNA: ENST00000495953.2

RAPGEF3-215, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-215ENST00000495953 ZC3H6P61129 1189 aaKnown RBP20.95■□□□□ 0.94
RAPGEF3-215ENST00000495953 KIAA0232Q92628 1395 aa20.95■□□□□ 0.94
RAPGEF3-215ENST00000495953 NWD2Q9ULI1 1742 aa20.93■□□□□ 0.94
RAPGEF3-215ENST00000495953 ANP32CO43423 234 aa20.93■□□□□ 0.94
RAPGEF3-215ENST00000495953 TNNT2P45379 298 aaPredicted RBP20.93■□□□□ 0.94
RAPGEF3-215ENST00000495953 CNGB1Q14028 1251 aaPredicted RBP20.93■□□□□ 0.94
RAPGEF3-215ENST00000495953 PRKRIP1Q9H875 184 aaPredicted RBP20.93■□□□□ 0.94
RAPGEF3-215ENST00000495953 PRDM11Q9NQV5 511 aa20.93■□□□□ 0.94
RAPGEF3-215ENST00000495953 TRPC5Q9UL62 973 aaPredicted RBP20.93■□□□□ 0.94
RAPGEF3-215ENST00000495953 RTL1A6NKG5 1358 aa20.93■□□□□ 0.94
RAPGEF3-215ENST00000495953 MAP3K19Q56UN5 1328 aa20.92■□□□□ 0.94
RAPGEF3-215ENST00000495953 COL18A1P39060 1754 aa20.92■□□□□ 0.94
RAPGEF3-215ENST00000495953 SMG6Q86US8 1419 aaKnown RBP20.91■□□□□ 0.94
RAPGEF3-215ENST00000495953 POLKQ9UBT6 870 aa20.91■□□□□ 0.94
RAPGEF3-215ENST00000495953 LMO7Q8WWI1 1683 aa20.9■□□□□ 0.94
RAPGEF3-215ENST00000495953 FAM83GA6ND36 823 aa20.9■□□□□ 0.94
RAPGEF3-215ENST00000495953 RRS1Q15050 365 aaKnown RBP20.9■□□□□ 0.94
RAPGEF3-215ENST00000495953 DIEXFQ68CQ4 756 aaKnown RBP20.9■□□□□ 0.94
RAPGEF3-215ENST00000495953 FLT4P35916 1363 aa20.89■□□□□ 0.93
RAPGEF3-215ENST00000495953 FBLN1P23142 703 aa20.89■□□□□ 0.93
RAPGEF3-215ENST00000495953 AMPHP49418 695 aa20.89■□□□□ 0.93
RAPGEF3-215ENST00000495953 IP6K1Q92551 441 aa20.89■□□□□ 0.93
RAPGEF3-215ENST00000495953 BLMP54132 1417 aaPredicted RBP20.88■□□□□ 0.93
RAPGEF3-215ENST00000495953 BRWD3Q6RI45 1802 aa20.88■□□□□ 0.93
RAPGEF3-215ENST00000495953 MYBBP1AQ9BQG0 1328 aaKnown RBP20.88■□□□□ 0.93
RAPGEF3-215ENST00000495953 PPP2R1AP30153 589 aa20.88■□□□□ 0.93
RAPGEF3-215ENST00000495953 EMILIN1Q9Y6C2 1016 aa20.88■□□□□ 0.93
RAPGEF3-215ENST00000495953 PEAK1Q9H792 1746 aa20.87■□□□□ 0.93
RAPGEF3-215ENST00000495953 ZBTB7CA1YPR0 619 aa20.87■□□□□ 0.93
RAPGEF3-215ENST00000495953 RGPD5Q99666 1765 aa20.87■□□□□ 0.93
RAPGEF3-215ENST00000495953 HOXC9P31274 260 aa20.86■□□□□ 0.93
RAPGEF3-215ENST00000495953 MTHFSP49914 203 aa20.86■□□□□ 0.93
RAPGEF3-215ENST00000495953 CHRNA2Q15822 529 aa20.86■□□□□ 0.93
RAPGEF3-215ENST00000495953 UNC5CLQ8IV45 518 aa20.86■□□□□ 0.93
RAPGEF3-215ENST00000495953 INSRP06213 1382 aa20.85■□□□□ 0.93
RAPGEF3-215ENST00000495953 CAMTA1Q9Y6Y1 1673 aa20.84■□□□□ 0.93
RAPGEF3-215ENST00000495953 PPM1GO15355 546 aaPredicted RBP20.84■□□□□ 0.93
RAPGEF3-215ENST00000495953 GJD4Q96KN9 370 aaPredicted RBP20.83■□□□□ 0.93
RAPGEF3-215ENST00000495953 CFAP53Q96M91 514 aa20.83■□□□□ 0.93
RAPGEF3-215ENST00000495953 BTG4Q9NY30 223 aa20.83■□□□□ 0.93
RAPGEF3-215ENST00000495953 AXIN2Q9Y2T1 843 aa20.83■□□□□ 0.93
RAPGEF3-215ENST00000495953 FAM208AQ9UK61 1670 aaKnown RBP20.82■□□□□ 0.92
RAPGEF3-215ENST00000495953 COL5A2P05997 1499 aaPredicted RBP20.81■□□□□ 0.92
RAPGEF3-215ENST00000495953 EVA1CP58658 441 aa20.8■□□□□ 0.92
RAPGEF3-215ENST00000495953 HSP90AB2PQ58FF8 381 aa20.8■□□□□ 0.92
RAPGEF3-215ENST00000495953 EP400Q96L91 3159 aa20.79■□□□□ 0.92
RAPGEF3-215ENST00000495953 ERBB3P21860 1342 aa20.78■□□□□ 0.92
RAPGEF3-215ENST00000495953 ANKRD24Q8TF21 1146 aa20.78■□□□□ 0.92
RAPGEF3-215ENST00000495953 WDR17Q8IZU2 1322 aa20.78■□□□□ 0.92
RAPGEF3-215ENST00000495953 VPS72Q15906 364 aa20.77■□□□□ 0.92
RAPGEF3-215ENST00000495953 CCDC9Q9Y3X0 531 aaKnown RBP20.77■□□□□ 0.92
RAPGEF3-215ENST00000495953 COL3A1P02461 1466 aaPredicted RBP20.75■□□□□ 0.91
RAPGEF3-215ENST00000495953 DIAPH1O60610 1272 aaKnown RBP20.75■□□□□ 0.91
RAPGEF3-215ENST00000495953 CSB-PGBD3P0DP91 1061 aa20.75■□□□□ 0.91
RAPGEF3-215ENST00000495953 STRN4Q9NRL3 753 aa20.75■□□□□ 0.91
RAPGEF3-215ENST00000495953 CRB1P82279 1406 aa20.74■□□□□ 0.91
RAPGEF3-215ENST00000495953 EIF4A2Q14240 407 aaKnown RBP20.74■□□□□ 0.91
RAPGEF3-215ENST00000495953 LTV1Q96GA3 475 aaPredicted RBP20.73■□□□□ 0.91
RAPGEF3-215ENST00000495953 NUDCQ9Y266 331 aa20.73■□□□□ 0.91
RAPGEF3-215ENST00000495953 IL13P35225 146 aa20.72■□□□□ 0.91
RAPGEF3-215ENST00000495953 TOM1L2Q6ZVM7 507 aa20.72■□□□□ 0.91
RAPGEF3-215ENST00000495953 CARD10Q9BWT7 1032 aa20.72■□□□□ 0.91
RAPGEF3-215ENST00000495953 RGPD2P0DJD1 1756 aa20.72■□□□□ 0.91
RAPGEF3-215ENST00000495953 THSD7AQ9UPZ6 1657 aa20.71■□□□□ 0.91
RAPGEF3-215ENST00000495953 LARP1Q6PKG0 1096 aaKnown RBP20.71■□□□□ 0.91
RAPGEF3-215ENST00000495953 RGPD1P0DJD0 1748 aa20.7■□□□□ 0.9
RAPGEF3-215ENST00000495953 CCER2I3L3R5 266 aa20.7■□□□□ 0.9
RAPGEF3-215ENST00000495953 FAM98CQ17RN3 349 aaKnown RBP20.7■□□□□ 0.9
RAPGEF3-215ENST00000495953 SEPT12Q8IYM1 358 aa20.7■□□□□ 0.9
RAPGEF3-215ENST00000495953 NLRP2Q9NX02 1062 aa20.7■□□□□ 0.9
RAPGEF3-215ENST00000495953 THRAP3Q9Y2W1 955 aaKnown RBP20.7■□□□□ 0.9
RAPGEF3-215ENST00000495953 SPATA31A5Q5VU36 1347 aa20.7■□□□□ 0.9
RAPGEF3-215ENST00000495953 SPATA31A7Q8IWB4 1347 aa20.7■□□□□ 0.9
RAPGEF3-215ENST00000495953 NBPF6Q5VWK0 638 aa20.68■□□□□ 0.9
RAPGEF3-215ENST00000495953 NBPF4Q96M43 638 aa20.68■□□□□ 0.9
RAPGEF3-215ENST00000495953 EYA1Q99502 592 aa20.68■□□□□ 0.9
RAPGEF3-215ENST00000495953 SPATA31A1Q5TZJ5 1347 aa20.68■□□□□ 0.9
RAPGEF3-215ENST00000495953 IGSF1Q8N6C5 1336 aa20.68■□□□□ 0.9
RAPGEF3-215ENST00000495953 NCAPD2Q15021 1401 aa20.68■□□□□ 0.9
RAPGEF3-215ENST00000495953 MIER1Q8N108 512 aa20.66■□□□□ 0.9
RAPGEF3-215ENST00000495953 TCP11L2Q8N4U5 519 aa20.66■□□□□ 0.9
RAPGEF3-215ENST00000495953 MRS2Q9HD23 443 aa20.66■□□□□ 0.9
RAPGEF3-215ENST00000495953 A0A0G2JS52 829 aa20.65■□□□□ 0.9
RAPGEF3-215ENST00000495953 MYT1Q01538 1121 aa20.65■□□□□ 0.9
RAPGEF3-215ENST00000495953 USP35Q9P2H5 1018 aa20.65■□□□□ 0.9
RAPGEF3-215ENST00000495953 WNK3Q9BYP7 1800 aa20.64■□□□□ 0.9
RAPGEF3-215ENST00000495953 PLEKHG2Q9H7P9 1386 aa20.64■□□□□ 0.89
RAPGEF3-215ENST00000495953 U2SURPO15042 1029 aaKnown RBP20.64■□□□□ 0.89
RAPGEF3-215ENST00000495953 ONECUT3O60422 494 aaPredicted RBP20.64■□□□□ 0.89
RAPGEF3-215ENST00000495953 FAM182BQ5T319 152 aa20.64■□□□□ 0.89
RAPGEF3-215ENST00000495953 BARGINQ6ZT62 677 aa20.64■□□□□ 0.89
RAPGEF3-215ENST00000495953 CDCA7Q9BWT1 371 aaPredicted RBP20.64■□□□□ 0.89
RAPGEF3-215ENST00000495953 KDRP35968 1356 aa20.63■□□□□ 0.89
RAPGEF3-215ENST00000495953 CCDC125Q86Z20 511 aa20.63■□□□□ 0.89
RAPGEF3-215ENST00000495953 WDR43Q15061 677 aaKnown RBP eCLIP20.62■□□□□ 0.89
RAPGEF3-215ENST00000495953 U2AF1L5P0DN76 240 aaPredicted RBP20.61■□□□□ 0.89
RAPGEF3-215ENST00000495953 U2AF1Q01081 240 aaKnown RBP eCLIP20.61■□□□□ 0.89
RAPGEF3-215ENST00000495953 CCDC184Q52MB2 194 aa20.61■□□□□ 0.89
RAPGEF3-215ENST00000495953 SULT6B1Q6IMI4 303 aa20.61■□□□□ 0.89
RAPGEF3-215ENST00000495953 PNNQ9H307 717 aaKnown RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms