RNA–Protein interactions for RNA: ENST00000495934.2

C9orf78-207, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-207ENST00000495934 WNK3Q9BYP7 1800 aa15.2■□□□□ 0.02
C9orf78-207ENST00000495934 NUDT16Q96DE0 195 aaKnown RBP15.19■□□□□ 0.02
C9orf78-207ENST00000495934 USP19O94966 1318 aa15.18■□□□□ 0.02
C9orf78-207ENST00000495934 ABTB2Q8N961 1025 aa15.18■□□□□ 0.02
C9orf78-207ENST00000495934 BCL9O00512 1426 aa15.17■□□□□ 0.02
C9orf78-207ENST00000495934 TOPAZ1Q8N9V7 1692 aa15.16■□□□□ 0.02
C9orf78-207ENST00000495934 POLR3AO14802 1390 aaPredicted RBP15.16■□□□□ 0.02
C9orf78-207ENST00000495934 AATKQ6ZMQ8 1374 aa15.16■□□□□ 0.02
C9orf78-207ENST00000495934 CACNB1Q02641 598 aaPredicted RBP15.16■□□□□ 0.02
C9orf78-207ENST00000495934 PELP1Q8IZL8 1130 aaKnown RBP15.16■□□□□ 0.02
C9orf78-207ENST00000495934 MARCH10Q8NA82 808 aaPredicted RBP15.16■□□□□ 0.02
C9orf78-207ENST00000495934 MPHOSPH9Q99550 1183 aa15.16■□□□□ 0.02
C9orf78-207ENST00000495934 ACEP12821 1306 aa15.16■□□□□ 0.02
C9orf78-207ENST00000495934 GCP02774 474 aa15.15■□□□□ 0.02
C9orf78-207ENST00000495934 ZBTB7CA1YPR0 619 aa15.14■□□□□ 0.01
C9orf78-207ENST00000495934 ARHGEF28Q8N1W1 1705 aaKnown RBP15.14■□□□□ 0.01
C9orf78-207ENST00000495934 TOM1L2Q6ZVM7 507 aa15.13■□□□□ 0.01
C9orf78-207ENST00000495934 NLRP13Q86W25 1043 aa15.13■□□□□ 0.01
C9orf78-207ENST00000495934 KLHL34Q8N239 644 aa15.13■□□□□ 0.01
C9orf78-207ENST00000495934 PAPPAQ13219 1627 aa15.13■□□□□ 0.01
C9orf78-207ENST00000495934 CDCA7Q9BWT1 371 aaPredicted RBP15.11■□□□□ 0.01
C9orf78-207ENST00000495934 CDK19Q9BWU1 502 aa15.1■□□□□ 0.01
C9orf78-207ENST00000495934 NHSQ6T4R5 1651 aa15.09■□□□□ 0.01
C9orf78-207ENST00000495934 KAT6BQ8WYB5 2073 aa15.09■□□□□ 0.01
C9orf78-207ENST00000495934 PLEKHG3A1L390 1219 aa15.09■□□□□ 0.01
C9orf78-207ENST00000495934 ADRA2BP18089 450 aa15.09■□□□□ 0.01
C9orf78-207ENST00000495934 CCDC61Q9Y6R9 512 aa15.09■□□□□ 0.01
C9orf78-207ENST00000495934 COL18A1P39060 1754 aa15.08■□□□□ 0.01
C9orf78-207ENST00000495934 HSPA6P17066 643 aa15.08■□□□□ 0
C9orf78-207ENST00000495934 ZNF827Q17R98 1081 aa15.08■□□□□ 0
C9orf78-207ENST00000495934 WDR17Q8IZU2 1322 aa15.08■□□□□ 0
C9orf78-207ENST00000495934 ATP10DQ9P241 1426 aa15.08■□□□□ 0
C9orf78-207ENST00000495934 COL24A1Q17RW2 1714 aa15.07■□□□□ 0
C9orf78-207ENST00000495934 POLD1P28340 1107 aa15.07■□□□□ 0
C9orf78-207ENST00000495934 NLGN2Q8NFZ4 835 aa15.07■□□□□ 0
C9orf78-207ENST00000495934 SLIT3O75094 1523 aa15.06■□□□□ 0
C9orf78-207ENST00000495934 QSER1Q2KHR3 1735 aa15.06■□□□□ 0
C9orf78-207ENST00000495934 RGPD5Q99666 1765 aa15.06■□□□□ 0
C9orf78-207ENST00000495934 GRIN3BO60391 1043 aa15.05■□□□□ -0
C9orf78-207ENST00000495934 BTAF1O14981 1849 aa15.05■□□□□ -0
C9orf78-207ENST00000495934 TNS2Q63HR2 1409 aa15.04■□□□□ -0
C9orf78-207ENST00000495934 EXOC5O00471 708 aa15.04■□□□□ -0
C9orf78-207ENST00000495934 YBX3P16989 372 aaKnown RBP eCLIP15.04■□□□□ -0
C9orf78-207ENST00000495934 SLC16A10Q8TF71 515 aa15.04■□□□□ -0
C9orf78-207ENST00000495934 ACSBG1Q96GR2 724 aa15.04■□□□□ -0
C9orf78-207ENST00000495934 GPBP1L1Q9HC44 474 aaPredicted RBP15.04■□□□□ -0
C9orf78-207ENST00000495934 KDM2AQ9Y2K7 1162 aa15.04■□□□□ -0
C9orf78-207ENST00000495934 AXIN2Q9Y2T1 843 aa15.04■□□□□ -0
C9orf78-207ENST00000495934 CPSF1Q10570 1443 aaKnown RBP15.02■□□□□ -0
C9orf78-207ENST00000495934 BRD4O60885 1362 aaPredicted RBP15.02■□□□□ -0
C9orf78-207ENST00000495934 TUBGCP6Q96RT7 1819 aa15.02■□□□□ -0
C9orf78-207ENST00000495934 CSB-PGBD3P0DP91 1061 aa15.02■□□□□ -0
C9orf78-207ENST00000495934 NLRP6P59044 892 aa15.02■□□□□ -0
C9orf78-207ENST00000495934 CARD10Q9BWT7 1032 aa15.02■□□□□ -0
C9orf78-207ENST00000495934 PPIP5K1Q6PFW1 1433 aa15.01□□□□□ -0.01
C9orf78-207ENST00000495934 LRRC4BQ9NT99 713 aa15.01□□□□□ -0.01
C9orf78-207ENST00000495934 USP6P35125 1406 aa15□□□□□ -0.01
C9orf78-207ENST00000495934 TRPM1Q7Z4N2 1603 aa15□□□□□ -0.01
C9orf78-207ENST00000495934 DCAF11Q8TEB1 546 aa15□□□□□ -0.01
C9orf78-207ENST00000495934 AKT1S1Q96B36 256 aa15□□□□□ -0.01
C9orf78-207ENST00000495934 ABCC6O95255 1503 aa15□□□□□ -0.01
C9orf78-207ENST00000495934 PIK3C2AO00443 1686 aa15□□□□□ -0.01
C9orf78-207ENST00000495934 PNPLA7Q6ZV29 1317 aa14.99□□□□□ -0.01
C9orf78-207ENST00000495934 ZNF526Q8TF50 670 aaPredicted RBP14.99□□□□□ -0.01
C9orf78-207ENST00000495934 CCDC7Q96M83 1385 aa14.98□□□□□ -0.01
C9orf78-207ENST00000495934 ADCY9O60503 1353 aa14.98□□□□□ -0.01
C9orf78-207ENST00000495934 SRPK2P78362 688 aaKnown RBP14.97□□□□□ -0.01
C9orf78-207ENST00000495934 ARHGEF25Q86VW2 580 aa14.97□□□□□ -0.01
C9orf78-207ENST00000495934 TFCP2L1Q9NZI6 479 aa14.96□□□□□ -0.01
C9orf78-207ENST00000495934 QRICH2Q9H0J4 1663 aa14.96□□□□□ -0.01
C9orf78-207ENST00000495934 SOX12O15370 315 aa14.94□□□□□ -0.02
C9orf78-207ENST00000495934 SLC27A3Q5K4L6 730 aa14.94□□□□□ -0.02
C9orf78-207ENST00000495934 STAC3Q96MF2 364 aa14.94□□□□□ -0.02
C9orf78-207ENST00000495934 CABP2Q9NPB3 220 aa14.94□□□□□ -0.02
C9orf78-207ENST00000495934 APLP1P51693 650 aa14.92□□□□□ -0.02
C9orf78-207ENST00000495934 TRIM26Q12899 539 aaPredicted RBP14.92□□□□□ -0.02
C9orf78-207ENST00000495934 KCNH5Q8NCM2 988 aa14.92□□□□□ -0.02
C9orf78-207ENST00000495934 CAPN15O75808 1086 aa14.91□□□□□ -0.02
C9orf78-207ENST00000495934 KCNQ4P56696 695 aa14.91□□□□□ -0.02
C9orf78-207ENST00000495934 CABP1Q9NZU7 370 aa14.91□□□□□ -0.02
C9orf78-207ENST00000495934 NFAT5O94916 1531 aa14.91□□□□□ -0.02
C9orf78-207ENST00000495934 RAB3GAP2Q9H2M9 1393 aa14.9□□□□□ -0.02
C9orf78-207ENST00000495934 KIF3CO14782 793 aa14.9□□□□□ -0.02
C9orf78-207ENST00000495934 IL2RBP14784 551 aa14.9□□□□□ -0.02
C9orf78-207ENST00000495934 NLRP2Q9NX02 1062 aa14.89□□□□□ -0.03
C9orf78-207ENST00000495934 MSL1Q68DK7 614 aa14.88□□□□□ -0.03
C9orf78-207ENST00000495934 DNAJC5GQ8N7S2 189 aa14.88□□□□□ -0.03
C9orf78-207ENST00000495934 LY75O60449 1722 aa14.88□□□□□ -0.03
C9orf78-207ENST00000495934 KIAA1210Q9ULL0 1709 aa14.88□□□□□ -0.03
C9orf78-207ENST00000495934 COL13A1Q5TAT6 717 aaPredicted RBP14.87□□□□□ -0.03
C9orf78-207ENST00000495934 CD2APQ9Y5K6 639 aa14.87□□□□□ -0.03
C9orf78-207ENST00000495934 ERBB3P21860 1342 aa14.86□□□□□ -0.03
C9orf78-207ENST00000495934 TTC21BQ7Z4L5 1316 aa14.86□□□□□ -0.03
C9orf78-207ENST00000495934 CENPJQ9HC77 1338 aaPredicted RBP14.86□□□□□ -0.03
C9orf78-207ENST00000495934 PCNTO95613 3336 aa14.86□□□□□ -0.03
C9orf78-207ENST00000495934 COL23A1Q86Y22 540 aaPredicted RBP14.85□□□□□ -0.03
C9orf78-207ENST00000495934 WDR90Q96KV7 1748 aa14.84□□□□□ -0.03
C9orf78-207ENST00000495934 SYTL4Q96C24 671 aaPredicted RBP14.84□□□□□ -0.03
C9orf78-207ENST00000495934 DOT1LQ8TEK3 1739 aa14.83□□□□□ -0.03
C9orf78-207ENST00000495934 LTN1O94822 1766 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms