RNA–Protein interactions for RNA: ENST00000495640.1

COPS3-211, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 333 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-211ENST00000495640 MMP16P51512 607 aa5.5□□□□□ -1.53
COPS3-211ENST00000495640 NCOA4Q13772 614 aa5.5□□□□□ -1.53
COPS3-211ENST00000495640 TJAP1Q5JTD0 557 aa5.5□□□□□ -1.53
COPS3-211ENST00000495640 B4GALNT3Q6L9W6 998 aa5.5□□□□□ -1.53
COPS3-211ENST00000495640 PDXDC2PQ6P474 469 aa5.5□□□□□ -1.53
COPS3-211ENST00000495640 TRAF7Q6Q0C0 670 aa5.5□□□□□ -1.53
COPS3-211ENST00000495640 FAM160A2Q8N612 972 aaPredicted RBP5.5□□□□□ -1.53
COPS3-211ENST00000495640 GPKOWQ92917 476 aaPredicted RBP eCLIP5.5□□□□□ -1.53
COPS3-211ENST00000495640 CLP1Q92989 425 aaKnown RBP5.5□□□□□ -1.53
COPS3-211ENST00000495640 MKRN1Q9UHC7 482 aaKnown RBP5.5□□□□□ -1.53
COPS3-211ENST00000495640 PCDHB3Q9Y5E6 796 aa5.5□□□□□ -1.53
COPS3-211ENST00000495640 NR1I2O75469 434 aa5.49□□□□□ -1.53
COPS3-211ENST00000495640 DKK1O94907 266 aa5.49□□□□□ -1.53
COPS3-211ENST00000495640 CCNYL3P0C7X3 344 aa5.49□□□□□ -1.53
COPS3-211ENST00000495640 PPP4CP60510 307 aa5.49□□□□□ -1.53
COPS3-211ENST00000495640 KCNH2Q12809 1159 aa5.49□□□□□ -1.53
COPS3-211ENST00000495640 ATP5J2-PTCD1G3V325 749 aa5.48□□□□□ -1.53
COPS3-211ENST00000495640 LZTS3O60299 673 aaPredicted RBP5.48□□□□□ -1.53
COPS3-211ENST00000495640 PTK2Q05397 1052 aa5.48□□□□□ -1.53
COPS3-211ENST00000495640 DNAJC14Q6Y2X3 702 aaPredicted RBP5.48□□□□□ -1.53
COPS3-211ENST00000495640 PLPP7Q8NBV4 271 aa5.48□□□□□ -1.53
COPS3-211ENST00000495640 NUDT12Q9BQG2 462 aa5.48□□□□□ -1.53
COPS3-211ENST00000495640 PRDM9Q9NQV7 894 aa5.48□□□□□ -1.53
COPS3-211ENST00000495640 RASA1P20936 1047 aa5.47□□□□□ -1.53
COPS3-211ENST00000495640 CTHP32929 405 aa5.47□□□□□ -1.53
COPS3-211ENST00000495640 MCCD1P59942 119 aaPredicted RBP5.47□□□□□ -1.53
COPS3-211ENST00000495640 CLDN10P78369 228 aa5.47□□□□□ -1.53
COPS3-211ENST00000495640 LAPTM4AQ15012 233 aa5.47□□□□□ -1.53
COPS3-211ENST00000495640 TSGA10IPQ3SY00 556 aa5.47□□□□□ -1.53
COPS3-211ENST00000495640 NOM1Q5C9Z4 860 aaKnown RBP5.47□□□□□ -1.53
COPS3-211ENST00000495640 SH3BP5LQ7L8J4 393 aa5.47□□□□□ -1.53
COPS3-211ENST00000495640 RNF135Q8IUD6 432 aa5.47□□□□□ -1.53
COPS3-211ENST00000495640 ADAM32Q8TC27 787 aa5.47□□□□□ -1.53
COPS3-211ENST00000495640 CCER1Q8TC90 406 aaPredicted RBP5.47□□□□□ -1.53
COPS3-211ENST00000495640 SLFNL1Q499Z3 407 aa5.46□□□□□ -1.54
COPS3-211ENST00000495640 NBPF14Q5TI25 921 aa5.46□□□□□ -1.54
COPS3-211ENST00000495640 SH3RF1Q7Z6J0 888 aa5.46□□□□□ -1.54
COPS3-211ENST00000495640 ANKMY2Q8IV38 441 aa5.46□□□□□ -1.54
COPS3-211ENST00000495640 ARMC2Q8NEN0 867 aa5.46□□□□□ -1.54
COPS3-211ENST00000495640 FAM200AQ8TCP9 573 aa5.46□□□□□ -1.54
COPS3-211ENST00000495640 ZNF592Q92610 1267 aa5.46□□□□□ -1.54
COPS3-211ENST00000495640 CDCA7Q9BWT1 371 aaPredicted RBP5.46□□□□□ -1.54
COPS3-211ENST00000495640 PCDHB9Q9Y5E1 797 aa5.46□□□□□ -1.54
COPS3-211ENST00000495640 SOWAHDA6NJG2 315 aa5.45□□□□□ -1.54
COPS3-211ENST00000495640 UNCXA6NJT0 531 aa5.45□□□□□ -1.54
COPS3-211ENST00000495640 E9PSI1 815 aa5.45□□□□□ -1.54
COPS3-211ENST00000495640 ZBTB7BO15156 539 aaPredicted RBP5.45□□□□□ -1.54
COPS3-211ENST00000495640 GFRA3O60609 400 aa5.45□□□□□ -1.54
COPS3-211ENST00000495640 ARID4AP29374 1257 aaPredicted RBP5.45□□□□□ -1.54
COPS3-211ENST00000495640 DPYDQ12882 1025 aa5.45□□□□□ -1.54
COPS3-211ENST00000495640 SWI5Q1ZZU3 235 aa5.45□□□□□ -1.54
COPS3-211ENST00000495640 MAP7D1Q3KQU3 841 aa5.45□□□□□ -1.54
COPS3-211ENST00000495640 LARP1Q6PKG0 1096 aaKnown RBP5.45□□□□□ -1.54
COPS3-211ENST00000495640 OGFOD1Q8N543 542 aa5.45□□□□□ -1.54
COPS3-211ENST00000495640 C1orf216Q8TAB5 229 aa5.45□□□□□ -1.54
COPS3-211ENST00000495640 CCDC85AQ96PX6 553 aaPredicted RBP5.45□□□□□ -1.54
COPS3-211ENST00000495640 SPSB2Q99619 263 aa5.45□□□□□ -1.54
COPS3-211ENST00000495640 KIAA1024Q9UPX6 916 aa5.45□□□□□ -1.54
COPS3-211ENST00000495640 RBM47A0AV96 593 aaKnown RBP5.44□□□□□ -1.54
COPS3-211ENST00000495640 NRG2O14511 850 aaPredicted RBP5.44□□□□□ -1.54
COPS3-211ENST00000495640 SCNN1AP37088 669 aa5.44□□□□□ -1.54
COPS3-211ENST00000495640 SERPINB4P48594 390 aa5.44□□□□□ -1.54
COPS3-211ENST00000495640 EML3Q32P44 896 aa5.44□□□□□ -1.54
COPS3-211ENST00000495640 PTCRAQ6ISU1 281 aaPredicted RBP5.44□□□□□ -1.54
COPS3-211ENST00000495640 SIX5Q8N196 739 aa5.44□□□□□ -1.54
COPS3-211ENST00000495640 MTRQ99707 1265 aa5.44□□□□□ -1.54
COPS3-211ENST00000495640 PRKD2Q9BZL6 878 aa5.44□□□□□ -1.54
COPS3-211ENST00000495640 TLL1O43897 1013 aa5.43□□□□□ -1.54
COPS3-211ENST00000495640 ATP2B4P23634 1241 aa5.43□□□□□ -1.54
COPS3-211ENST00000495640 OCLNQ16625 522 aa5.43□□□□□ -1.54
COPS3-211ENST00000495640 PPP1R18Q6NYC8 613 aa5.43□□□□□ -1.54
COPS3-211ENST00000495640 ZNF516Q92618 1163 aa5.43□□□□□ -1.54
COPS3-211ENST00000495640 ARHGAP9Q9BRR9 750 aa5.43□□□□□ -1.54
COPS3-211ENST00000495640 UNC93B1Q9H1C4 597 aa5.43□□□□□ -1.54
COPS3-211ENST00000495640 IGSF5Q9NSI5 407 aa5.43□□□□□ -1.54
COPS3-211ENST00000495640 IGSF3O75054 1194 aa5.42□□□□□ -1.54
COPS3-211ENST00000495640 C4orf48Q5BLP8 95 aa5.42□□□□□ -1.54
COPS3-211ENST00000495640 LARGE2Q8N3Y3 721 aa5.42□□□□□ -1.54
COPS3-211ENST00000495640 ZNF594Q96JF6 807 aaPredicted RBP5.42□□□□□ -1.54
COPS3-211ENST00000495640 IL21Q9HBE4 155 aa5.42□□□□□ -1.54
COPS3-211ENST00000495640 DNAAF2Q9NVR5 837 aaKnown RBP5.42□□□□□ -1.54
COPS3-211ENST00000495640 V9GY48 417 aaPredicted RBP5.42□□□□□ -1.54
COPS3-211ENST00000495640 ADH1BP00325 375 aa5.41□□□□□ -1.54
COPS3-211ENST00000495640 ATP1A2P50993 1020 aa5.41□□□□□ -1.54
COPS3-211ENST00000495640 COPS2P61201 443 aa5.41□□□□□ -1.54
COPS3-211ENST00000495640 TAS1R3Q7RTX0 852 aa5.41□□□□□ -1.54
COPS3-211ENST00000495640 TRIM50Q86XT4 487 aa5.41□□□□□ -1.54
COPS3-211ENST00000495640 NOD1Q9Y239 953 aa5.41□□□□□ -1.54
COPS3-211ENST00000495640 PCDHGA11Q9Y5H2 935 aa5.41□□□□□ -1.54
COPS3-211ENST00000495640 ZPR1O75312 459 aa5.4□□□□□ -1.54
COPS3-211ENST00000495640 GIGYF1O75420 1035 aaPredicted RBP5.4□□□□□ -1.54
COPS3-211ENST00000495640 ERCC3P19447 782 aa5.4□□□□□ -1.54
COPS3-211ENST00000495640 ERFEQ4G0M1 354 aa5.4□□□□□ -1.54
COPS3-211ENST00000495640 ZBTB33Q86T24 672 aa5.4□□□□□ -1.54
COPS3-211ENST00000495640 NKX2-3Q8TAU0 364 aa5.4□□□□□ -1.54
COPS3-211ENST00000495640 KIAA1522Q9P206 1035 aaPredicted RBP5.4□□□□□ -1.54
COPS3-211ENST00000495640 DOLKQ9UPQ8 538 aa5.4□□□□□ -1.54
COPS3-211ENST00000495640 ESPNB1AK53 854 aa5.39□□□□□ -1.55
COPS3-211ENST00000495640 GTF2IP78347 998 aa5.39□□□□□ -1.55
COPS3-211ENST00000495640 ECM1Q16610 540 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms