RNA–Protein interactions for RNA: ENST00000494954.1

PNKD-208, Transcript of PNKD, MBL domain containing, humanhuman

TSL 3

Gene PNKD, Length 248 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKD-208ENST00000494954 GIGYF1O75420 1035 aaPredicted RBP8.73□□□□□ -1.01
PNKD-208ENST00000494954 PROM2Q8N271 834 aa8.73□□□□□ -1.01
PNKD-208ENST00000494954 FHDC1Q9C0D6 1143 aaPredicted RBP8.73□□□□□ -1.01
PNKD-208ENST00000494954 USP19O94966 1318 aa8.73□□□□□ -1.01
PNKD-208ENST00000494954 MYOM1P52179 1685 aa8.72□□□□□ -1.01
PNKD-208ENST00000494954 STK26Q9P289 416 aa8.72□□□□□ -1.01
PNKD-208ENST00000494954 POLR3AO14802 1390 aaPredicted RBP8.72□□□□□ -1.01
PNKD-208ENST00000494954 TMEM132EQ6IEE7 984 aa8.71□□□□□ -1.02
PNKD-208ENST00000494954 FARP1Q9Y4F1 1045 aaPredicted RBP8.71□□□□□ -1.02
PNKD-208ENST00000494954 CHD4Q14839 1912 aa8.71□□□□□ -1.02
PNKD-208ENST00000494954 PRR36Q9H6K5 1346 aa8.71□□□□□ -1.02
PNKD-208ENST00000494954 BRD4O60885 1362 aaPredicted RBP8.71□□□□□ -1.02
PNKD-208ENST00000494954 ADGRB1O14514 1584 aa8.7□□□□□ -1.02
PNKD-208ENST00000494954 LOC105371045A0A1W2PR82 267 aa8.69□□□□□ -1.02
PNKD-208ENST00000494954 CD44P16070 742 aaKnown RBP8.69□□□□□ -1.02
PNKD-208ENST00000494954 SLC15A2Q16348 729 aa8.69□□□□□ -1.02
PNKD-208ENST00000494954 LMOD2Q6P5Q4 547 aa8.69□□□□□ -1.02
PNKD-208ENST00000494954 PRAM1Q96QH2 718 aa8.69□□□□□ -1.02
PNKD-208ENST00000494954 CDCA7Q9BWT1 371 aaPredicted RBP8.69□□□□□ -1.02
PNKD-208ENST00000494954 CRB1P82279 1406 aa8.69□□□□□ -1.02
PNKD-208ENST00000494954 COL5A2P05997 1499 aaPredicted RBP8.69□□□□□ -1.02
PNKD-208ENST00000494954 PHRF1Q9P1Y6 1649 aaKnown RBP8.69□□□□□ -1.02
PNKD-208ENST00000494954 GOLGB1Q14789 3259 aaKnown RBP8.69□□□□□ -1.02
PNKD-208ENST00000494954 SHANK3Q9BYB0 1731 aa8.68□□□□□ -1.02
PNKD-208ENST00000494954 WASLO00401 505 aaPredicted RBP8.68□□□□□ -1.02
PNKD-208ENST00000494954 PMFBP1Q8TBY8 1022 aa8.68□□□□□ -1.02
PNKD-208ENST00000494954 SLC16A10Q8TF71 515 aa8.68□□□□□ -1.02
PNKD-208ENST00000494954 PDGFDQ9GZP0 370 aaPredicted RBP8.68□□□□□ -1.02
PNKD-208ENST00000494954 RGPD8O14715 1765 aaPredicted RBP8.68□□□□□ -1.02
PNKD-208ENST00000494954 PAPPAQ13219 1627 aa8.67□□□□□ -1.02
PNKD-208ENST00000494954 COL24A1Q17RW2 1714 aa8.67□□□□□ -1.02
PNKD-208ENST00000494954 LARP1Q6PKG0 1096 aaKnown RBP8.67□□□□□ -1.02
PNKD-208ENST00000494954 STAC3Q96MF2 364 aa8.67□□□□□ -1.02
PNKD-208ENST00000494954 ARXQ96QS3 562 aa8.67□□□□□ -1.02
PNKD-208ENST00000494954 ADCY9O60503 1353 aa8.66□□□□□ -1.02
PNKD-208ENST00000494954 ZBTB7AO95365 584 aa8.66□□□□□ -1.02
PNKD-208ENST00000494954 HSPA6P17066 643 aa8.66□□□□□ -1.02
PNKD-208ENST00000494954 STK32BQ9NY57 414 aa8.66□□□□□ -1.02
PNKD-208ENST00000494954 LRRC37A3O60309 1634 aa8.65□□□□□ -1.02
PNKD-208ENST00000494954 PLEKHG3A1L390 1219 aa8.65□□□□□ -1.02
PNKD-208ENST00000494954 CHRNA2Q15822 529 aa8.65□□□□□ -1.02
PNKD-208ENST00000494954 TXNRD1Q16881 649 aa8.65□□□□□ -1.02
PNKD-208ENST00000494954 GRIN3BO60391 1043 aa8.64□□□□□ -1.03
PNKD-208ENST00000494954 EVA1CP58658 441 aa8.64□□□□□ -1.03
PNKD-208ENST00000494954 STRN4Q9NRL3 753 aa8.64□□□□□ -1.03
PNKD-208ENST00000494954 TRPM1Q7Z4N2 1603 aa8.64□□□□□ -1.03
PNKD-208ENST00000494954 SBF2Q86WG5 1849 aa8.64□□□□□ -1.03
PNKD-208ENST00000494954 DDB1Q16531 1140 aa8.63□□□□□ -1.03
PNKD-208ENST00000494954 CFAP70Q5T0N1 1121 aa8.63□□□□□ -1.03
PNKD-208ENST00000494954 NGDNQ8NEJ9 315 aaKnown RBP8.63□□□□□ -1.03
PNKD-208ENST00000494954 GCP02774 474 aa8.62□□□□□ -1.03
PNKD-208ENST00000494954 ZC3H6P61129 1189 aaKnown RBP8.62□□□□□ -1.03
PNKD-208ENST00000494954 LHX8Q68G74 356 aa8.62□□□□□ -1.03
PNKD-208ENST00000494954 MARCH10Q8NA82 808 aaPredicted RBP8.62□□□□□ -1.03
PNKD-208ENST00000494954 POGKQ9P215 609 aa8.62□□□□□ -1.03
PNKD-208ENST00000494954 CCDC61Q9Y6R9 512 aa8.62□□□□□ -1.03
PNKD-208ENST00000494954 ABCC6O95255 1503 aa8.62□□□□□ -1.03
PNKD-208ENST00000494954 WDR17Q8IZU2 1322 aa8.61□□□□□ -1.03
PNKD-208ENST00000494954 SLIT3O75094 1523 aa8.61□□□□□ -1.03
PNKD-208ENST00000494954 ITSN1Q15811 1721 aa8.61□□□□□ -1.03
PNKD-208ENST00000494954 POTEIP0CG38 1075 aa8.61□□□□□ -1.03
PNKD-208ENST00000494954 PTF1AQ7RTS3 328 aa8.61□□□□□ -1.03
PNKD-208ENST00000494954 CREBZFQ9NS37 354 aa8.61□□□□□ -1.03
PNKD-208ENST00000494954 USP35Q9P2H5 1018 aa8.61□□□□□ -1.03
PNKD-208ENST00000494954 TOPAZ1Q8N9V7 1692 aa8.6□□□□□ -1.03
PNKD-208ENST00000494954 SPDYE4A6NLX3 237 aa8.6□□□□□ -1.03
PNKD-208ENST00000494954 PAK3O75914 559 aaPredicted RBP8.6□□□□□ -1.03
PNKD-208ENST00000494954 GPR162Q16538 588 aa8.6□□□□□ -1.03
PNKD-208ENST00000494954 RGL3Q3MIN7 710 aa8.6□□□□□ -1.03
PNKD-208ENST00000494954 NLRP13Q86W25 1043 aa8.6□□□□□ -1.03
PNKD-208ENST00000494954 DNAJC5GQ8N7S2 189 aa8.6□□□□□ -1.03
PNKD-208ENST00000494954 NUDT16Q96DE0 195 aaKnown RBP8.6□□□□□ -1.03
PNKD-208ENST00000494954 CARD10Q9BWT7 1032 aa8.6□□□□□ -1.03
PNKD-208ENST00000494954 TNS2Q63HR2 1409 aa8.6□□□□□ -1.03
PNKD-208ENST00000494954 QSER1Q2KHR3 1735 aa8.6□□□□□ -1.03
PNKD-208ENST00000494954 ATP10DQ9P241 1426 aa8.59□□□□□ -1.03
PNKD-208ENST00000494954 ACEP12821 1306 aa8.58□□□□□ -1.04
PNKD-208ENST00000494954 APLP1P51693 650 aa8.58□□□□□ -1.04
PNKD-208ENST00000494954 SLC27A3Q5K4L6 730 aa8.58□□□□□ -1.04
PNKD-208ENST00000494954 CCDC7Q96M83 1385 aa8.58□□□□□ -1.04
PNKD-208ENST00000494954 ARHGEF28Q8N1W1 1705 aaKnown RBP8.57□□□□□ -1.04
PNKD-208ENST00000494954 NHSQ6T4R5 1651 aa8.57□□□□□ -1.04
PNKD-208ENST00000494954 SAFB2Q14151 953 aaKnown RBP eCLIP8.57□□□□□ -1.04
PNKD-208ENST00000494954 ABTB2Q8N961 1025 aa8.57□□□□□ -1.04
PNKD-208ENST00000494954 JMYQ8N9B5 988 aa8.57□□□□□ -1.04
PNKD-208ENST00000494954 MPHOSPH9Q99550 1183 aa8.57□□□□□ -1.04
PNKD-208ENST00000494954 CPSF1Q10570 1443 aaKnown RBP8.56□□□□□ -1.04
PNKD-208ENST00000494954 COL18A1P39060 1754 aa8.56□□□□□ -1.04
PNKD-208ENST00000494954 PLEKHG5O94827 1062 aa8.56□□□□□ -1.04
PNKD-208ENST00000494954 YBX3P16989 372 aaKnown RBP eCLIP8.56□□□□□ -1.04
PNKD-208ENST00000494954 POLD1P28340 1107 aa8.56□□□□□ -1.04
PNKD-208ENST00000494954 ITGAEP38570 1179 aa8.56□□□□□ -1.04
PNKD-208ENST00000494954 HIRIP3Q9BW71 556 aaPredicted RBP8.56□□□□□ -1.04
PNKD-208ENST00000494954 GPBP1L1Q9HC44 474 aaPredicted RBP8.56□□□□□ -1.04
PNKD-208ENST00000494954 MINK1Q8N4C8 1332 aaPredicted RBP8.55□□□□□ -1.04
PNKD-208ENST00000494954 WNK3Q9BYP7 1800 aa8.55□□□□□ -1.04
PNKD-208ENST00000494954 SLC34A2O95436 690 aa8.55□□□□□ -1.04
PNKD-208ENST00000494954 HMGB2P26583 209 aaKnown RBP8.55□□□□□ -1.04
PNKD-208ENST00000494954 ZNF827Q17R98 1081 aa8.55□□□□□ -1.04
PNKD-208ENST00000494954 ARHGEF25Q86VW2 580 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms