RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 CCDC7Q96M83 1385 aa32.37■■■□□ 2.77
CLIC3-203ENST00000494426 SPATA31A5Q5VU36 1347 aa32.37■■■□□ 2.77
CLIC3-203ENST00000494426 SPATA31A7Q8IWB4 1347 aa32.37■■■□□ 2.77
CLIC3-203ENST00000494426 WASHC2AQ641Q2 1341 aa32.36■■■□□ 2.77
CLIC3-203ENST00000494426 FBLN1P23142 703 aa32.35■■■□□ 2.77
CLIC3-203ENST00000494426 EVA1CP58658 441 aa32.35■■■□□ 2.77
CLIC3-203ENST00000494426 LARP1Q6PKG0 1096 aaKnown RBP32.34■■■□□ 2.77
CLIC3-203ENST00000494426 ONECUT3O60422 494 aaPredicted RBP32.33■■■□□ 2.77
CLIC3-203ENST00000494426 SPATA31A1Q5TZJ5 1347 aa32.32■■■□□ 2.76
CLIC3-203ENST00000494426 ABCC6O95255 1503 aa32.32■■■□□ 2.76
CLIC3-203ENST00000494426 CGNL1Q0VF96 1302 aa32.31■■■□□ 2.76
CLIC3-203ENST00000494426 FAM98CQ17RN3 349 aaKnown RBP32.27■■■□□ 2.76
CLIC3-203ENST00000494426 MAP3K19Q56UN5 1328 aa32.26■■■□□ 2.76
CLIC3-203ENST00000494426 ANKRD26Q9UPS8 1709 aa32.26■■■□□ 2.76
CLIC3-203ENST00000494426 BRWD3Q6RI45 1802 aa32.26■■■□□ 2.76
CLIC3-203ENST00000494426 SEPT12Q8IYM1 358 aa32.26■■■□□ 2.75
CLIC3-203ENST00000494426 WDR17Q8IZU2 1322 aa32.25■■■□□ 2.75
CLIC3-203ENST00000494426 USP35Q9P2H5 1018 aa32.24■■■□□ 2.75
CLIC3-203ENST00000494426 CRB1P82279 1406 aa32.24■■■□□ 2.75
CLIC3-203ENST00000494426 ZEB1P37275 1124 aaPredicted RBP32.23■■■□□ 2.75
CLIC3-203ENST00000494426 RRS1Q15050 365 aaKnown RBP32.23■■■□□ 2.75
CLIC3-203ENST00000494426 IP6K1Q92551 441 aa32.23■■■□□ 2.75
CLIC3-203ENST00000494426 THSD7AQ9UPZ6 1657 aa32.22■■■□□ 2.75
CLIC3-203ENST00000494426 PER1O15534 1290 aaPredicted RBP32.21■■■□□ 2.75
CLIC3-203ENST00000494426 HOXC9P31274 260 aa32.19■■■□□ 2.74
CLIC3-203ENST00000494426 BARGINQ6ZT62 677 aa32.19■■■□□ 2.74
CLIC3-203ENST00000494426 TOM1L2Q6ZVM7 507 aa32.19■■■□□ 2.74
CLIC3-203ENST00000494426 TCP11L2Q8N4U5 519 aa32.19■■■□□ 2.74
CLIC3-203ENST00000494426 KNSTRNQ9Y448 316 aa32.19■■■□□ 2.74
CLIC3-203ENST00000494426 BLMP54132 1417 aaPredicted RBP32.18■■■□□ 2.74
CLIC3-203ENST00000494426 ERBB3P21860 1342 aa32.18■■■□□ 2.74
CLIC3-203ENST00000494426 PEAK1Q9H792 1746 aa32.17■■■□□ 2.74
CLIC3-203ENST00000494426 AMPHP49418 695 aa32.17■■■□□ 2.74
CLIC3-203ENST00000494426 THRAP3Q9Y2W1 955 aaKnown RBP32.17■■■□□ 2.74
CLIC3-203ENST00000494426 NSD2O96028 1365 aa32.17■■■□□ 2.74
CLIC3-203ENST00000494426 CSB-PGBD3P0DP91 1061 aa32.16■■■□□ 2.74
CLIC3-203ENST00000494426 AMER1Q5JTC6 1135 aaPredicted RBP32.16■■■□□ 2.74
CLIC3-203ENST00000494426 ANKRD24Q8TF21 1146 aa32.16■■■□□ 2.74
CLIC3-203ENST00000494426 MAP2P11137 1827 aaKnown RBP32.16■■■□□ 2.74
CLIC3-203ENST00000494426 CARD10Q9BWT7 1032 aa32.14■■■□□ 2.74
CLIC3-203ENST00000494426 RTL1A6NKG5 1358 aa32.14■■■□□ 2.74
CLIC3-203ENST00000494426 A0A0G2JS52 829 aa32.13■■■□□ 2.73
CLIC3-203ENST00000494426 MYT1Q01538 1121 aa32.13■■■□□ 2.73
CLIC3-203ENST00000494426 EMILIN1Q9Y6C2 1016 aa32.12■■■□□ 2.73
CLIC3-203ENST00000494426 WNK3Q9BYP7 1800 aa32.11■■■□□ 2.73
CLIC3-203ENST00000494426 KRT27Q7Z3Y8 459 aa32.1■■■□□ 2.73
CLIC3-203ENST00000494426 LTV1Q96GA3 475 aaPredicted RBP32.1■■■□□ 2.73
CLIC3-203ENST00000494426 KIF24Q5T7B8 1368 aa32.09■■■□□ 2.73
CLIC3-203ENST00000494426 TNNT2P45379 298 aaPredicted RBP32.09■■■□□ 2.73
CLIC3-203ENST00000494426 UPF1Q92900 1129 aaKnown RBP eCLIP32.09■■■□□ 2.73
CLIC3-203ENST00000494426 POLKQ9UBT6 870 aa32.09■■■□□ 2.73
CLIC3-203ENST00000494426 HSP90AB2PQ58FF8 381 aa32.08■■■□□ 2.73
CLIC3-203ENST00000494426 PARP4Q9UKK3 1724 aaKnown RBP32.08■■■□□ 2.73
CLIC3-203ENST00000494426 FLT4P35916 1363 aa32.07■■■□□ 2.73
CLIC3-203ENST00000494426 RGPD2P0DJD1 1756 aa32.07■■■□□ 2.72
CLIC3-203ENST00000494426 MORC1Q86VD1 984 aa32.07■■■□□ 2.72
CLIC3-203ENST00000494426 NLRP2Q9NX02 1062 aa32.07■■■□□ 2.72
CLIC3-203ENST00000494426 FAM208AQ9UK61 1670 aaKnown RBP32.07■■■□□ 2.72
CLIC3-203ENST00000494426 INSRP06213 1382 aa32.06■■■□□ 2.72
CLIC3-203ENST00000494426 DISP2A7MBM2 1401 aa32.04■■■□□ 2.72
CLIC3-203ENST00000494426 PPM1GO15355 546 aaPredicted RBP32.02■■■□□ 2.72
CLIC3-203ENST00000494426 CC2D1BQ5T0F9 858 aaKnown RBP32.01■■■□□ 2.71
CLIC3-203ENST00000494426 NPC1L1Q9UHC9 1359 aa32.01■■■□□ 2.71
CLIC3-203ENST00000494426 LRRC37A3O60309 1634 aa32■■■□□ 2.71
CLIC3-203ENST00000494426 FAM182BQ5T319 152 aa32■■■□□ 2.71
CLIC3-203ENST00000494426 CDCA7Q9BWT1 371 aaPredicted RBP31.99■■■□□ 2.71
CLIC3-203ENST00000494426 NBPF6Q5VWK0 638 aa31.97■■■□□ 2.71
CLIC3-203ENST00000494426 NBPF4Q96M43 638 aa31.97■■■□□ 2.71
CLIC3-203ENST00000494426 SMG6Q86US8 1419 aaKnown RBP31.97■■■□□ 2.71
CLIC3-203ENST00000494426 PDE3BQ13370 1112 aa31.96■■■□□ 2.71
CLIC3-203ENST00000494426 DDB1Q16531 1140 aa31.95■■■□□ 2.71
CLIC3-203ENST00000494426 EP400Q96L91 3159 aa31.95■■■□□ 2.71
CLIC3-203ENST00000494426 IL2RBP14784 551 aa31.92■■■□□ 2.7
CLIC3-203ENST00000494426 CNGB1Q14028 1251 aaPredicted RBP31.92■■■□□ 2.7
CLIC3-203ENST00000494426 USHBP1Q8N6Y0 703 aa31.91■■■□□ 2.7
CLIC3-203ENST00000494426 EXOC5O00471 708 aa31.89■■■□□ 2.7
CLIC3-203ENST00000494426 EIF4A2Q14240 407 aaKnown RBP31.88■■■□□ 2.69
CLIC3-203ENST00000494426 FAM196AQ6ZSG2 479 aa31.87■■■□□ 2.69
CLIC3-203ENST00000494426 MARCH10Q8NA82 808 aaPredicted RBP31.87■■■□□ 2.69
CLIC3-203ENST00000494426 TNS2Q63HR2 1409 aa31.86■■■□□ 2.69
CLIC3-203ENST00000494426 CCDC125Q86Z20 511 aa31.86■■■□□ 2.69
CLIC3-203ENST00000494426 EYA1Q99502 592 aa31.86■■■□□ 2.69
CLIC3-203ENST00000494426 NCAPD2Q15021 1401 aa31.85■■■□□ 2.69
CLIC3-203ENST00000494426 MEGF6O75095 1541 aa31.85■■■□□ 2.69
CLIC3-203ENST00000494426 MTHFSP49914 203 aa31.84■■■□□ 2.69
CLIC3-203ENST00000494426 DDX10Q13206 875 aaKnown RBP31.84■■■□□ 2.69
CLIC3-203ENST00000494426 OVOS2A0A0G2JMS6 1433 aa31.81■■■□□ 2.68
CLIC3-203ENST00000494426 RGPD1P0DJD0 1748 aa31.8■■■□□ 2.68
CLIC3-203ENST00000494426 SBF2Q86WG5 1849 aa31.79■■■□□ 2.68
CLIC3-203ENST00000494426 SHANK3Q9BYB0 1731 aa31.79■■■□□ 2.68
CLIC3-203ENST00000494426 TNS1Q9HBL0 1735 aaKnown RBP31.78■■■□□ 2.68
CLIC3-203ENST00000494426 TRIM37O94972 964 aa31.77■■■□□ 2.68
CLIC3-203ENST00000494426 BCL9O00512 1426 aa31.76■■■□□ 2.68
CLIC3-203ENST00000494426 IL13P35225 146 aa31.76■■■□□ 2.67
CLIC3-203ENST00000494426 RAPGEF4Q8WZA2 1011 aa31.76■■■□□ 2.67
CLIC3-203ENST00000494426 IGSF1Q8N6C5 1336 aa31.75■■■□□ 2.67
CLIC3-203ENST00000494426 TATP17735 454 aaPredicted RBP31.74■■■□□ 2.67
CLIC3-203ENST00000494426 ZCRB1Q8TBF4 217 aaKnown RBP31.74■■■□□ 2.67
CLIC3-203ENST00000494426 DEFB132Q7Z7B7 95 aa31.73■■■□□ 2.67
CLIC3-203ENST00000494426 SF3B2Q13435 895 aaKnown RBP31.72■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms