RNA–Protein interactions for RNA: ENST00000494300.1

NXF3-206, Transcript of nuclear RNA export factor 3, humanhuman

TSL 3

Gene NXF3, Length 543 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-206ENST00000494300 METP08581 1390 aa8.49□□□□□ -1.05
NXF3-206ENST00000494300 MSH6P52701 1360 aa8.49□□□□□ -1.05
NXF3-206ENST00000494300 TMEM94Q12767 1356 aa8.49□□□□□ -1.05
NXF3-206ENST00000494300 SEMA3EO15041 775 aa8.49□□□□□ -1.05
NXF3-206ENST00000494300 CFAP70Q5T0N1 1121 aa8.49□□□□□ -1.05
NXF3-206ENST00000494300 L3MBTL2Q969R5 705 aa8.49□□□□□ -1.05
NXF3-206ENST00000494300 CLUAP1Q96AJ1 413 aa8.49□□□□□ -1.05
NXF3-206ENST00000494300 C14orf93Q9H972 538 aaKnown RBP8.49□□□□□ -1.05
NXF3-206ENST00000494300 ALKQ9UM73 1620 aa8.49□□□□□ -1.05
NXF3-206ENST00000494300 LAMC1P11047 1609 aa8.48□□□□□ -1.05
NXF3-206ENST00000494300 C2orf72A6NCS6 295 aa8.48□□□□□ -1.05
NXF3-206ENST00000494300 ATF3P18847 181 aa8.48□□□□□ -1.05
NXF3-206ENST00000494300 FBXO41Q8TF61 875 aa8.48□□□□□ -1.05
NXF3-206ENST00000494300 POGKQ9P215 609 aa8.48□□□□□ -1.05
NXF3-206ENST00000494300 LRRC7Q96NW7 1537 aa8.48□□□□□ -1.05
NXF3-206ENST00000494300 NWD1Q149M9 1564 aa8.48□□□□□ -1.05
NXF3-206ENST00000494300 NRXN1Q9ULB1 1477 aa8.47□□□□□ -1.05
NXF3-206ENST00000494300 IFT172Q9UG01 1749 aa8.47□□□□□ -1.05
NXF3-206ENST00000494300 TMEM132EQ6IEE7 984 aa8.47□□□□□ -1.05
NXF3-206ENST00000494300 RETREG2Q8NC44 543 aa8.47□□□□□ -1.05
NXF3-206ENST00000494300 LRPPRCP42704 1394 aaKnown RBP8.47□□□□□ -1.05
NXF3-206ENST00000494300 NRXN3Q9Y4C0 1643 aa8.47□□□□□ -1.05
NXF3-206ENST00000494300 KIF3CO14782 793 aa8.46□□□□□ -1.06
NXF3-206ENST00000494300 PIP4K2BP78356 416 aa8.46□□□□□ -1.06
NXF3-206ENST00000494300 RBM33Q96EV2 1170 aaKnown RBP8.46□□□□□ -1.06
NXF3-206ENST00000494300 C19orf44Q9H6X5 657 aa8.46□□□□□ -1.06
NXF3-206ENST00000494300 PTCH1Q13635 1447 aa8.46□□□□□ -1.06
NXF3-206ENST00000494300 PRAG1Q86YV5 1406 aa8.46□□□□□ -1.06
NXF3-206ENST00000494300 YTHDC2Q9H6S0 1430 aaKnown RBP8.46□□□□□ -1.06
NXF3-206ENST00000494300 NCOA3Q9Y6Q9 1424 aa8.46□□□□□ -1.06
NXF3-206ENST00000494300 ROCK2O75116 1388 aaKnown RBP8.45□□□□□ -1.06
NXF3-206ENST00000494300 ABCC11Q96J66 1382 aa8.45□□□□□ -1.06
NXF3-206ENST00000494300 CHD2O14647 1828 aaKnown RBP8.45□□□□□ -1.06
NXF3-206ENST00000494300 PTPRUQ92729 1446 aa8.45□□□□□ -1.06
NXF3-206ENST00000494300 DOK7Q18PE1 504 aa8.44□□□□□ -1.06
NXF3-206ENST00000494300 GPHNQ9NQX3 736 aaPredicted RBP8.44□□□□□ -1.06
NXF3-206ENST00000494300 TRAK1Q9UPV9 953 aa8.44□□□□□ -1.06
NXF3-206ENST00000494300 XRN1Q8IZH2 1706 aaKnown RBP8.43□□□□□ -1.06
NXF3-206ENST00000494300 SAFB2Q14151 953 aaKnown RBP eCLIP8.43□□□□□ -1.06
NXF3-206ENST00000494300 CCDC125Q86Z20 511 aa8.43□□□□□ -1.06
NXF3-206ENST00000494300 ZNF710Q8N1W2 664 aa8.43□□□□□ -1.06
NXF3-206ENST00000494300 PRAM1Q96QH2 718 aa8.43□□□□□ -1.06
NXF3-206ENST00000494300 POLR3GLQ9BT43 218 aa8.43□□□□□ -1.06
NXF3-206ENST00000494300 EIF3AQ14152 1382 aaKnown RBP8.43□□□□□ -1.06
NXF3-206ENST00000494300 ROBO2Q9HCK4 1378 aa8.43□□□□□ -1.06
NXF3-206ENST00000494300 STRCP1A6NGW2 1772 aa8.43□□□□□ -1.06
NXF3-206ENST00000494300 PDE4AP27815 886 aa8.42□□□□□ -1.06
NXF3-206ENST00000494300 WAPLQ7Z5K2 1190 aa8.42□□□□□ -1.06
NXF3-206ENST00000494300 SIRT1Q96EB6 747 aa8.42□□□□□ -1.06
NXF3-206ENST00000494300 CARD11Q9BXL7 1154 aa8.42□□□□□ -1.06
NXF3-206ENST00000494300 FAM117AQ9C073 453 aa8.42□□□□□ -1.06
NXF3-206ENST00000494300 IGSF5Q9NSI5 407 aa8.42□□□□□ -1.06
NXF3-206ENST00000494300 TECPR2O15040 1411 aa8.42□□□□□ -1.06
NXF3-206ENST00000494300 FAM135BQ49AJ0 1406 aa8.42□□□□□ -1.06
NXF3-206ENST00000494300 ADGRL3Q9HAR2 1447 aa8.42□□□□□ -1.06
NXF3-206ENST00000494300 DCCP43146 1447 aa8.41□□□□□ -1.06
NXF3-206ENST00000494300 PLEKHG3A1L390 1219 aa8.41□□□□□ -1.06
NXF3-206ENST00000494300 TRIM66O15016 1216 aa8.41□□□□□ -1.06
NXF3-206ENST00000494300 RIMBP2O15034 1052 aa8.41□□□□□ -1.06
NXF3-206ENST00000494300 ST18O60284 1047 aa8.41□□□□□ -1.06
NXF3-206ENST00000494300 HOXB3P14651 431 aaPredicted RBP8.41□□□□□ -1.06
NXF3-206ENST00000494300 PDE4DQ08499 809 aa8.41□□□□□ -1.06
NXF3-206ENST00000494300 FBXW7Q969H0 707 aa8.41□□□□□ -1.06
NXF3-206ENST00000494300 SLAIN2Q9P270 581 aa8.41□□□□□ -1.06
NXF3-206ENST00000494300 SERPINA10Q9UK55 444 aa8.41□□□□□ -1.06
NXF3-206ENST00000494300 SETD1AO15047 1707 aaKnown RBP8.4□□□□□ -1.06
NXF3-206ENST00000494300 ZNF316A6NFI3 1004 aaPredicted RBP8.4□□□□□ -1.06
NXF3-206ENST00000494300 FOXK1P85037 733 aa8.4□□□□□ -1.06
NXF3-206ENST00000494300 NBPF1Q3BBV0 1214 aa8.4□□□□□ -1.06
NXF3-206ENST00000494300 TAF7LQ5H9L4 462 aa8.4□□□□□ -1.06
NXF3-206ENST00000494300 LARP6Q9BRS8 491 aaKnown RBP8.4□□□□□ -1.06
NXF3-206ENST00000494300 CRISPLD2Q9H0B8 497 aa8.4□□□□□ -1.06
NXF3-206ENST00000494300 KIAA1210Q9ULL0 1709 aa8.4□□□□□ -1.07
NXF3-206ENST00000494300 ADGRB1O14514 1584 aa8.39□□□□□ -1.07
NXF3-206ENST00000494300 ASXL1Q8IXJ9 1541 aa8.39□□□□□ -1.07
NXF3-206ENST00000494300 DLC1Q96QB1 1528 aa8.39□□□□□ -1.07
NXF3-206ENST00000494300 MINK1Q8N4C8 1332 aaPredicted RBP8.39□□□□□ -1.07
NXF3-206ENST00000494300 CENPJQ9HC77 1338 aaPredicted RBP8.39□□□□□ -1.07
NXF3-206ENST00000494300 DSG2Q14126 1118 aa8.39□□□□□ -1.07
NXF3-206ENST00000494300 PLPP6Q8IY26 295 aa8.39□□□□□ -1.07
NXF3-206ENST00000494300 KNDC1Q76NI1 1749 aa8.39□□□□□ -1.07
NXF3-206ENST00000494300 PDE4CQ08493 712 aa8.38□□□□□ -1.07
NXF3-206ENST00000494300 NBPF8Q3BBV2 869 aa8.38□□□□□ -1.07
NXF3-206ENST00000494300 LCE2DQ5TA82 110 aaPredicted RBP8.38□□□□□ -1.07
NXF3-206ENST00000494300 FNBP4Q8N3X1 1017 aaPredicted RBP8.38□□□□□ -1.07
NXF3-206ENST00000494300 HIRIP3Q9BW71 556 aaPredicted RBP8.38□□□□□ -1.07
NXF3-206ENST00000494300 RALGAPBQ86X10 1494 aa8.38□□□□□ -1.07
NXF3-206ENST00000494300 PLEKHH1Q9ULM0 1364 aa8.37□□□□□ -1.07
NXF3-206ENST00000494300 NUTM2FA1L443 756 aa8.37□□□□□ -1.07
NXF3-206ENST00000494300 ESCO1Q5FWF5 840 aa8.37□□□□□ -1.07
NXF3-206ENST00000494300 PPP1R15BQ5SWA1 713 aa8.37□□□□□ -1.07
NXF3-206ENST00000494300 DDX27Q96GQ7 796 aaKnown RBP8.37□□□□□ -1.07
NXF3-206ENST00000494300 ARIH1Q9Y4X5 557 aaPredicted RBP8.37□□□□□ -1.07
NXF3-206ENST00000494300 TRPM1Q7Z4N2 1603 aa8.36□□□□□ -1.07
NXF3-206ENST00000494300 CDC42BPGQ6DT37 1551 aa8.36□□□□□ -1.07
NXF3-206ENST00000494300 SRPK2P78362 688 aaKnown RBP8.36□□□□□ -1.07
NXF3-206ENST00000494300 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.36□□□□□ -1.07
NXF3-206ENST00000494300 GPRASP1Q5JY77 1395 aa8.35□□□□□ -1.07
NXF3-206ENST00000494300 EVC2Q86UK5 1308 aa8.35□□□□□ -1.07
NXF3-206ENST00000494300 NALCNQ8IZF0 1738 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms