RNA–Protein interactions for RNA: ENST00000494155.1

C1orf50-203, Transcript of chromosome 1 open reading frame 50, humanhuman

TSL 3

Gene C1orf50, Length 497 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf50-203ENST00000494155 KIF7Q2M1P5 1343 aa13□□□□□ -0.33
C1orf50-203ENST00000494155 LTV1Q96GA3 475 aaPredicted RBP13□□□□□ -0.33
C1orf50-203ENST00000494155 ONECUT3O60422 494 aaPredicted RBP12.99□□□□□ -0.33
C1orf50-203ENST00000494155 AMPHP49418 695 aa12.99□□□□□ -0.33
C1orf50-203ENST00000494155 RRS1Q15050 365 aaKnown RBP12.99□□□□□ -0.33
C1orf50-203ENST00000494155 TCP11L2Q8N4U5 519 aa12.99□□□□□ -0.33
C1orf50-203ENST00000494155 NWD2Q9ULI1 1742 aa12.99□□□□□ -0.33
C1orf50-203ENST00000494155 TNNT2P45379 298 aaPredicted RBP12.98□□□□□ -0.33
C1orf50-203ENST00000494155 CNGB1Q14028 1251 aaPredicted RBP12.98□□□□□ -0.33
C1orf50-203ENST00000494155 KRT27Q7Z3Y8 459 aa12.98□□□□□ -0.33
C1orf50-203ENST00000494155 UPF1Q92900 1129 aaKnown RBP eCLIP12.98□□□□□ -0.33
C1orf50-203ENST00000494155 NLRP2Q9NX02 1062 aa12.98□□□□□ -0.33
C1orf50-203ENST00000494155 GLI3P10071 1580 aa12.98□□□□□ -0.33
C1orf50-203ENST00000494155 OVOS2A0A0J9YW53 1432 aa12.97□□□□□ -0.33
C1orf50-203ENST00000494155 OVOS2Q6IE36 1432 aa12.97□□□□□ -0.33
C1orf50-203ENST00000494155 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.97□□□□□ -0.33
C1orf50-203ENST00000494155 PPM1GO15355 546 aaPredicted RBP12.97□□□□□ -0.33
C1orf50-203ENST00000494155 FAM182BQ5T319 152 aa12.97□□□□□ -0.33
C1orf50-203ENST00000494155 KNSTRNQ9Y448 316 aa12.97□□□□□ -0.33
C1orf50-203ENST00000494155 MAP3K19Q56UN5 1328 aa12.96□□□□□ -0.33
C1orf50-203ENST00000494155 WDR17Q8IZU2 1322 aa12.96□□□□□ -0.33
C1orf50-203ENST00000494155 ANKRD24Q8TF21 1146 aa12.96□□□□□ -0.33
C1orf50-203ENST00000494155 IP6K1Q92551 441 aa12.96□□□□□ -0.33
C1orf50-203ENST00000494155 COL5A2P05997 1499 aaPredicted RBP12.96□□□□□ -0.34
C1orf50-203ENST00000494155 NFAT5O94916 1531 aa12.95□□□□□ -0.34
C1orf50-203ENST00000494155 PDE3BQ13370 1112 aa12.95□□□□□ -0.34
C1orf50-203ENST00000494155 BARGINQ6ZT62 677 aa12.95□□□□□ -0.34
C1orf50-203ENST00000494155 THRAP3Q9Y2W1 955 aaKnown RBP12.95□□□□□ -0.34
C1orf50-203ENST00000494155 NRAPQ86VF7 1730 aa12.95□□□□□ -0.34
C1orf50-203ENST00000494155 WASHC2AQ641Q2 1341 aa12.94□□□□□ -0.34
C1orf50-203ENST00000494155 MYOM1P52179 1685 aa12.94□□□□□ -0.34
C1orf50-203ENST00000494155 HOXC9P31274 260 aa12.94□□□□□ -0.34
C1orf50-203ENST00000494155 DIEXFQ68CQ4 756 aaKnown RBP12.94□□□□□ -0.34
C1orf50-203ENST00000494155 CARD10Q9BWT7 1032 aa12.94□□□□□ -0.34
C1orf50-203ENST00000494155 CRB1P82279 1406 aa12.94□□□□□ -0.34
C1orf50-203ENST00000494155 MORC1Q86VD1 984 aa12.93□□□□□ -0.34
C1orf50-203ENST00000494155 EMILIN1Q9Y6C2 1016 aa12.93□□□□□ -0.34
C1orf50-203ENST00000494155 CCDC7Q96M83 1385 aa12.93□□□□□ -0.34
C1orf50-203ENST00000494155 LMO7Q8WWI1 1683 aa12.93□□□□□ -0.34
C1orf50-203ENST00000494155 HSP90AB2PQ58FF8 381 aa12.92□□□□□ -0.34
C1orf50-203ENST00000494155 ERBB3P21860 1342 aa12.91□□□□□ -0.34
C1orf50-203ENST00000494155 DDB1Q16531 1140 aa12.91□□□□□ -0.34
C1orf50-203ENST00000494155 CC2D1BQ5T0F9 858 aaKnown RBP12.91□□□□□ -0.34
C1orf50-203ENST00000494155 COL18A1P39060 1754 aa12.91□□□□□ -0.34
C1orf50-203ENST00000494155 RGPD5Q99666 1765 aa12.9□□□□□ -0.34
C1orf50-203ENST00000494155 SF3B2Q13435 895 aaKnown RBP12.9□□□□□ -0.34
C1orf50-203ENST00000494155 EXOC5O00471 708 aa12.89□□□□□ -0.35
C1orf50-203ENST00000494155 CDCA7Q9BWT1 371 aaPredicted RBP12.89□□□□□ -0.35
C1orf50-203ENST00000494155 POLKQ9UBT6 870 aa12.89□□□□□ -0.35
C1orf50-203ENST00000494155 FAM196AQ6ZSG2 479 aa12.88□□□□□ -0.35
C1orf50-203ENST00000494155 USHBP1Q8N6Y0 703 aa12.88□□□□□ -0.35
C1orf50-203ENST00000494155 USP54Q70EL1 1684 aa12.88□□□□□ -0.35
C1orf50-203ENST00000494155 LTN1O94822 1766 aa12.88□□□□□ -0.35
C1orf50-203ENST00000494155 BRWD3Q6RI45 1802 aa12.88□□□□□ -0.35
C1orf50-203ENST00000494155 BLMP54132 1417 aaPredicted RBP12.88□□□□□ -0.35
C1orf50-203ENST00000494155 PER1O15534 1290 aaPredicted RBP12.87□□□□□ -0.35
C1orf50-203ENST00000494155 TRIM37O94972 964 aa12.87□□□□□ -0.35
C1orf50-203ENST00000494155 IL2RBP14784 551 aa12.87□□□□□ -0.35
C1orf50-203ENST00000494155 AMER1Q5JTC6 1135 aaPredicted RBP12.87□□□□□ -0.35
C1orf50-203ENST00000494155 NBPF6Q5VWK0 638 aa12.87□□□□□ -0.35
C1orf50-203ENST00000494155 CCDC125Q86Z20 511 aa12.87□□□□□ -0.35
C1orf50-203ENST00000494155 NBPF4Q96M43 638 aa12.87□□□□□ -0.35
C1orf50-203ENST00000494155 KIF20BQ96Q89 1820 aa12.87□□□□□ -0.35
C1orf50-203ENST00000494155 FLT4P35916 1363 aa12.86□□□□□ -0.35
C1orf50-203ENST00000494155 RTL1A6NKG5 1358 aa12.85□□□□□ -0.35
C1orf50-203ENST00000494155 NSD2O96028 1365 aa12.85□□□□□ -0.35
C1orf50-203ENST00000494155 DDX10Q13206 875 aaKnown RBP12.85□□□□□ -0.35
C1orf50-203ENST00000494155 DEFB132Q7Z7B7 95 aa12.85□□□□□ -0.35
C1orf50-203ENST00000494155 SMG6Q86US8 1419 aaKnown RBP12.85□□□□□ -0.35
C1orf50-203ENST00000494155 INSRP06213 1382 aa12.84□□□□□ -0.35
C1orf50-203ENST00000494155 EP400Q96L91 3159 aa12.84□□□□□ -0.35
C1orf50-203ENST00000494155 ABCC6O95255 1503 aa12.84□□□□□ -0.35
C1orf50-203ENST00000494155 MARCH10Q8NA82 808 aaPredicted RBP12.84□□□□□ -0.35
C1orf50-203ENST00000494155 DDX54Q8TDD1 881 aaKnown RBP12.84□□□□□ -0.35
C1orf50-203ENST00000494155 THSD7AQ9UPZ6 1657 aa12.83□□□□□ -0.35
C1orf50-203ENST00000494155 RAPGEF4Q8WZA2 1011 aa12.83□□□□□ -0.36
C1orf50-203ENST00000494155 APBA3O96018 575 aa12.82□□□□□ -0.36
C1orf50-203ENST00000494155 BAG6P46379 1132 aa12.82□□□□□ -0.36
C1orf50-203ENST00000494155 KIF24Q5T7B8 1368 aa12.81□□□□□ -0.36
C1orf50-203ENST00000494155 TATP17735 454 aaPredicted RBP12.81□□□□□ -0.36
C1orf50-203ENST00000494155 MTHFSP49914 203 aa12.81□□□□□ -0.36
C1orf50-203ENST00000494155 EN1Q05925 392 aaPredicted RBP12.81□□□□□ -0.36
C1orf50-203ENST00000494155 EIF4A2Q14240 407 aaKnown RBP12.81□□□□□ -0.36
C1orf50-203ENST00000494155 ZCRB1Q8TBF4 217 aaKnown RBP12.81□□□□□ -0.36
C1orf50-203ENST00000494155 EYA1Q99502 592 aa12.81□□□□□ -0.36
C1orf50-203ENST00000494155 MAP2P11137 1827 aaKnown RBP12.81□□□□□ -0.36
C1orf50-203ENST00000494155 DISP2A7MBM2 1401 aa12.8□□□□□ -0.36
C1orf50-203ENST00000494155 ACSBG1Q96GR2 724 aa12.8□□□□□ -0.36
C1orf50-203ENST00000494155 PEAK1Q9H792 1746 aa12.79□□□□□ -0.36
C1orf50-203ENST00000494155 PTF1AQ7RTS3 328 aa12.78□□□□□ -0.36
C1orf50-203ENST00000494155 OVOS2A0A0G2JMS6 1433 aa12.78□□□□□ -0.36
C1orf50-203ENST00000494155 KAT6BQ8WYB5 2073 aa12.77□□□□□ -0.36
C1orf50-203ENST00000494155 KCNQ2O43526 872 aa12.77□□□□□ -0.37
C1orf50-203ENST00000494155 EZH2Q15910 746 aaKnown RBP12.77□□□□□ -0.37
C1orf50-203ENST00000494155 SYTL4Q96C24 671 aaPredicted RBP12.77□□□□□ -0.37
C1orf50-203ENST00000494155 PARP4Q9UKK3 1724 aaKnown RBP12.76□□□□□ -0.37
C1orf50-203ENST00000494155 RGPD2P0DJD1 1756 aa12.76□□□□□ -0.37
C1orf50-203ENST00000494155 BCL11BQ9C0K0 894 aaPredicted RBP12.76□□□□□ -0.37
C1orf50-203ENST00000494155 TNS2Q63HR2 1409 aa12.76□□□□□ -0.37
C1orf50-203ENST00000494155 LRRC37A3O60309 1634 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms