RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 SPINT1O43278 529 aa9.35□□□□□ -0.91
CLIP4-212ENST00000493551 WHAMMQ8TF30 809 aa9.35□□□□□ -0.91
CLIP4-212ENST00000493551 SCARF2Q96GP6 870 aaPredicted RBP9.35□□□□□ -0.91
CLIP4-212ENST00000493551 SH3BP5LQ7L8J4 393 aa9.34□□□□□ -0.91
CLIP4-212ENST00000493551 PGPEP1Q9NXJ5 209 aa9.34□□□□□ -0.91
CLIP4-212ENST00000493551 ITGA6P23229 1130 aa9.33□□□□□ -0.92
CLIP4-212ENST00000493551 HAP1P54257 671 aaPredicted RBP9.33□□□□□ -0.92
CLIP4-212ENST00000493551 Q6ZVU0 165 aa9.33□□□□□ -0.92
CLIP4-212ENST00000493551 SV2AQ7L0J3 742 aa9.33□□□□□ -0.92
CLIP4-212ENST00000493551 CABLES1Q8TDN4 633 aa9.33□□□□□ -0.92
CLIP4-212ENST00000493551 MAGEB6P1A0A0J9YX57 407 aa9.32□□□□□ -0.92
CLIP4-212ENST00000493551 CDC14CA4D256 554 aa9.32□□□□□ -0.92
CLIP4-212ENST00000493551 RIC3Q7Z5B4 369 aa9.32□□□□□ -0.92
CLIP4-212ENST00000493551 VWA5B2Q8N398 1253 aa9.32□□□□□ -0.92
CLIP4-212ENST00000493551 CBLBQ13191 982 aa9.31□□□□□ -0.92
CLIP4-212ENST00000493551 PPP1R26Q5T8A7 1209 aaPredicted RBP9.31□□□□□ -0.92
CLIP4-212ENST00000493551 TSC1Q92574 1164 aa9.31□□□□□ -0.92
CLIP4-212ENST00000493551 BARGINQ6ZT62 677 aa9.3□□□□□ -0.92
CLIP4-212ENST00000493551 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.3□□□□□ -0.92
CLIP4-212ENST00000493551 CSPP1Q1MSJ5 1256 aa9.29□□□□□ -0.92
CLIP4-212ENST00000493551 GPKOWQ92917 476 aaPredicted RBP eCLIP9.29□□□□□ -0.92
CLIP4-212ENST00000493551 MAP3K10Q02779 954 aa9.28□□□□□ -0.92
CLIP4-212ENST00000493551 ERFEQ4G0M1 354 aa9.28□□□□□ -0.92
CLIP4-212ENST00000493551 CARD14Q9BXL6 1004 aa9.28□□□□□ -0.92
CLIP4-212ENST00000493551 NACADO15069 1562 aa9.28□□□□□ -0.92
CLIP4-212ENST00000493551 ADAMTS2O95450 1211 aa9.27□□□□□ -0.93
CLIP4-212ENST00000493551 NUTM2BA6NNL0 878 aaPredicted RBP9.26□□□□□ -0.93
CLIP4-212ENST00000493551 NUTM2EB1AL46 878 aaPredicted RBP9.26□□□□□ -0.93
CLIP4-212ENST00000493551 SRSF11Q05519 484 aaKnown RBP9.26□□□□□ -0.93
CLIP4-212ENST00000493551 DHX9Q08211 1270 aaKnown RBP9.26□□□□□ -0.93
CLIP4-212ENST00000493551 NUTM2DQ5VT03 806 aaPredicted RBP9.26□□□□□ -0.93
CLIP4-212ENST00000493551 NUTM2AQ8IVF1 878 aaPredicted RBP9.26□□□□□ -0.93
CLIP4-212ENST00000493551 PARP9Q8IXQ6 854 aa9.26□□□□□ -0.93
CLIP4-212ENST00000493551 HELBQ8NG08 1087 aaPredicted RBP9.26□□□□□ -0.93
CLIP4-212ENST00000493551 UNC13AQ9UPW8 1703 aa9.25□□□□□ -0.93
CLIP4-212ENST00000493551 ZMYND10O75800 440 aa9.25□□□□□ -0.93
CLIP4-212ENST00000493551 TUSC1Q2TAM9 212 aa9.25□□□□□ -0.93
CLIP4-212ENST00000493551 LYPD4Q6UWN0 246 aa9.25□□□□□ -0.93
CLIP4-212ENST00000493551 CDV3Q9UKY7 258 aaKnown RBP9.25□□□□□ -0.93
CLIP4-212ENST00000493551 CTSOP43234 321 aaPredicted RBP9.24□□□□□ -0.93
CLIP4-212ENST00000493551 XP32Q5T750 250 aa9.24□□□□□ -0.93
CLIP4-212ENST00000493551 QPCTQ16769 361 aa9.23□□□□□ -0.93
CLIP4-212ENST00000493551 KCTD15Q96SI1 283 aaPredicted RBP9.23□□□□□ -0.93
CLIP4-212ENST00000493551 INSM2Q96T92 566 aaPredicted RBP9.23□□□□□ -0.93
CLIP4-212ENST00000493551 POLMQ9NP87 494 aaPredicted RBP9.23□□□□□ -0.93
CLIP4-212ENST00000493551 ENAMQ9NRM1 1142 aa9.23□□□□□ -0.93
CLIP4-212ENST00000493551 MSTNO14793 375 aa9.22□□□□□ -0.93
CLIP4-212ENST00000493551 LILRB3O75022 631 aa9.22□□□□□ -0.93
CLIP4-212ENST00000493551 RELBQ01201 579 aa9.22□□□□□ -0.93
CLIP4-212ENST00000493551 RNF217Q8TC41 542 aa9.22□□□□□ -0.93
CLIP4-212ENST00000493551 SLC10A4Q96EP9 437 aa9.22□□□□□ -0.93
CLIP4-212ENST00000493551 AGBL1Q96MI9 1066 aa9.22□□□□□ -0.93
CLIP4-212ENST00000493551 LIMD1Q9UGP4 676 aa9.22□□□□□ -0.93
CLIP4-212ENST00000493551 SENP3-EIF4A1A0A087X0R7 540 aa9.21□□□□□ -0.94
CLIP4-212ENST00000493551 ADAM23O75077 832 aa9.21□□□□□ -0.94
CLIP4-212ENST00000493551 CELA2BP08218 269 aaPredicted RBP9.21□□□□□ -0.94
CLIP4-212ENST00000493551 BICRAQ9NZM4 1560 aa9.2□□□□□ -0.94
CLIP4-212ENST00000493551 PHF20L1A8MW92 1017 aa9.2□□□□□ -0.94
CLIP4-212ENST00000493551 PLA2G4EQ3MJ16 856 aa9.2□□□□□ -0.94
CLIP4-212ENST00000493551 MYSM1Q5VVJ2 828 aa9.2□□□□□ -0.94
CLIP4-212ENST00000493551 PDXDC2PQ6P474 469 aa9.2□□□□□ -0.94
CLIP4-212ENST00000493551 ARHGAP9Q9BRR9 750 aa9.2□□□□□ -0.94
CLIP4-212ENST00000493551 GAS6Q14393 721 aa9.18□□□□□ -0.94
CLIP4-212ENST00000493551 INTS6LQ5JSJ4 861 aaKnown RBP9.18□□□□□ -0.94
CLIP4-212ENST00000493551 DCAF5Q96JK2 942 aa9.18□□□□□ -0.94
CLIP4-212ENST00000493551 SPOCK3Q9BQ16 436 aa9.17□□□□□ -0.94
CLIP4-212ENST00000493551 ZNF395Q9H8N7 513 aaPredicted RBP9.17□□□□□ -0.94
CLIP4-212ENST00000493551 PODNQ7Z5L7 613 aa9.16□□□□□ -0.94
CLIP4-212ENST00000493551 ZBTB33Q86T24 672 aa9.16□□□□□ -0.94
CLIP4-212ENST00000493551 VSIG10Q8N0Z9 540 aa9.16□□□□□ -0.94
CLIP4-212ENST00000493551 ZC3H15Q8WU90 426 aaKnown RBP9.16□□□□□ -0.94
CLIP4-212ENST00000493551 TRIM66O15016 1216 aa9.15□□□□□ -0.94
CLIP4-212ENST00000493551 RTL5Q5HYW3 569 aaPredicted RBP9.15□□□□□ -0.94
CLIP4-212ENST00000493551 BEND7Q8N7W2 519 aaPredicted RBP9.15□□□□□ -0.94
CLIP4-212ENST00000493551 MBIPQ9NS73 344 aa9.15□□□□□ -0.94
CLIP4-212ENST00000493551 FOXD4L5Q5VV16 416 aaPredicted RBP9.14□□□□□ -0.95
CLIP4-212ENST00000493551 FKBPLQ9UIM3 349 aa9.14□□□□□ -0.95
CLIP4-212ENST00000493551 CNTNAP5Q8WYK1 1306 aa9.13□□□□□ -0.95
CLIP4-212ENST00000493551 ZC3H4Q9UPT8 1303 aaKnown RBP9.13□□□□□ -0.95
CLIP4-212ENST00000493551 ADH1AP07327 375 aa9.13□□□□□ -0.95
CLIP4-212ENST00000493551 LYSMD3Q7Z3D4 306 aa9.13□□□□□ -0.95
CLIP4-212ENST00000493551 GALNT6Q8NCL4 622 aa9.13□□□□□ -0.95
CLIP4-212ENST00000493551 GMCL1Q96IK5 515 aa9.13□□□□□ -0.95
CLIP4-212ENST00000493551 CUEDC1Q9NWM3 386 aaPredicted RBP9.13□□□□□ -0.95
CLIP4-212ENST00000493551 CECR2Q9BXF3 1484 aa9.13□□□□□ -0.95
CLIP4-212ENST00000493551 ITGB2P05107 769 aa9.12□□□□□ -0.95
CLIP4-212ENST00000493551 NBPF20Q3BBV1 942 aa9.12□□□□□ -0.95
CLIP4-212ENST00000493551 PROCP04070 461 aa9.11□□□□□ -0.95
CLIP4-212ENST00000493551 CLK2P49760 499 aaKnown RBP9.11□□□□□ -0.95
CLIP4-212ENST00000493551 FOXR1Q6PIV2 292 aa9.11□□□□□ -0.95
CLIP4-212ENST00000493551 NEDD1Q8NHV4 660 aa9.11□□□□□ -0.95
CLIP4-212ENST00000493551 ZNF837Q96EG3 531 aaPredicted RBP9.11□□□□□ -0.95
CLIP4-212ENST00000493551 CC2D2AQ9P2K1 1620 aa9.11□□□□□ -0.95
CLIP4-212ENST00000493551 BCRP11274 1271 aa9.1□□□□□ -0.95
CLIP4-212ENST00000493551 ZNF784Q8NCA9 323 aaPredicted RBP9.1□□□□□ -0.95
CLIP4-212ENST00000493551 IGF1RP08069 1367 aa9.1□□□□□ -0.95
CLIP4-212ENST00000493551 PTGIRP43119 386 aa9.09□□□□□ -0.95
CLIP4-212ENST00000493551 PTK2Q05397 1052 aa9.09□□□□□ -0.95
CLIP4-212ENST00000493551 CTDSPL2Q05D32 466 aa9.09□□□□□ -0.95
CLIP4-212ENST00000493551 TRIM22Q8IYM9 498 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms