RNA–Protein interactions for RNA: ENST00000493109.2

COL12A1-209, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-209ENST00000493109 GPKOWQ92917 476 aaPredicted RBP eCLIP12.89□□□□□ -0.35
COL12A1-209ENST00000493109 Q6ZVU0 165 aa12.88□□□□□ -0.35
COL12A1-209ENST00000493109 LRRN4Q8WUT4 740 aa12.88□□□□□ -0.35
COL12A1-209ENST00000493109 TTLL8A6PVC2 850 aa12.87□□□□□ -0.35
COL12A1-209ENST00000493109 OCSTAMPQ9BR26 566 aa12.87□□□□□ -0.35
COL12A1-209ENST00000493109 PTSQ03393 145 aa12.86□□□□□ -0.35
COL12A1-209ENST00000493109 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.85□□□□□ -0.35
COL12A1-209ENST00000493109 FIGNL2A6NMB9 653 aa12.84□□□□□ -0.35
COL12A1-209ENST00000493109 SPINT1O43278 529 aa12.84□□□□□ -0.35
COL12A1-209ENST00000493109 PDXDC2PQ6P474 469 aa12.84□□□□□ -0.35
COL12A1-209ENST00000493109 RSPH6AQ9H0K4 717 aa12.83□□□□□ -0.36
COL12A1-209ENST00000493109 FKBPLQ9UIM3 349 aa12.83□□□□□ -0.36
COL12A1-209ENST00000493109 KCTD15Q96SI1 283 aaPredicted RBP12.82□□□□□ -0.36
COL12A1-209ENST00000493109 ARHGAP9Q9BRR9 750 aa12.82□□□□□ -0.36
COL12A1-209ENST00000493109 NR6A1Q15406 480 aa12.81□□□□□ -0.36
COL12A1-209ENST00000493109 CNTNAP3BQ96NU0 1288 aa12.81□□□□□ -0.36
COL12A1-209ENST00000493109 CNTNAP3Q9BZ76 1288 aa12.81□□□□□ -0.36
COL12A1-209ENST00000493109 LOC100996750A0A140TA64 210 aa12.8□□□□□ -0.36
COL12A1-209ENST00000493109 KCNMA1Q12791 1236 aa12.8□□□□□ -0.36
COL12A1-209ENST00000493109 INTS6LQ5JSJ4 861 aaKnown RBP12.8□□□□□ -0.36
COL12A1-209ENST00000493109 KRTAP4-6Q9BYQ5 205 aa12.8□□□□□ -0.36
COL12A1-209ENST00000493109 PGPEP1Q9NXJ5 209 aa12.8□□□□□ -0.36
COL12A1-209ENST00000493109 RNFT1Q5M7Z0 435 aa12.79□□□□□ -0.36
COL12A1-209ENST00000493109 CCDC155Q8N6L0 562 aa12.79□□□□□ -0.36
COL12A1-209ENST00000493109 PROCA1Q8NCQ7 364 aaPredicted RBP12.79□□□□□ -0.36
COL12A1-209ENST00000493109 AGBL1Q96MI9 1066 aa12.79□□□□□ -0.36
COL12A1-209ENST00000493109 CTSOP43234 321 aaPredicted RBP12.78□□□□□ -0.36
COL12A1-209ENST00000493109 NANOS1Q8WY41 292 aaKnown RBP12.78□□□□□ -0.36
COL12A1-209ENST00000493109 SLC10A4Q96EP9 437 aa12.78□□□□□ -0.36
COL12A1-209ENST00000493109 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.78□□□□□ -0.36
COL12A1-209ENST00000493109 SLC35F4A4IF30 521 aa12.77□□□□□ -0.37
COL12A1-209ENST00000493109 COL25A1Q9BXS0 654 aaPredicted RBP12.77□□□□□ -0.37
COL12A1-209ENST00000493109 EPS8L1Q8TE68 723 aa12.76□□□□□ -0.37
COL12A1-209ENST00000493109 SKIV2LQ15477 1246 aaKnown RBP12.75□□□□□ -0.37
COL12A1-209ENST00000493109 ZC3H4Q9UPT8 1303 aaKnown RBP12.74□□□□□ -0.37
COL12A1-209ENST00000493109 PPP2R2DQ66LE6 453 aa12.74□□□□□ -0.37
COL12A1-209ENST00000493109 INSM2Q96T92 566 aaPredicted RBP12.74□□□□□ -0.37
COL12A1-209ENST00000493109 CDV3Q9UKY7 258 aaKnown RBP12.74□□□□□ -0.37
COL12A1-209ENST00000493109 RELBQ01201 579 aa12.73□□□□□ -0.37
COL12A1-209ENST00000493109 SH3D19Q5HYK7 790 aa12.73□□□□□ -0.37
COL12A1-209ENST00000493109 ZNF385CQ66K41 422 aaPredicted RBP12.73□□□□□ -0.37
COL12A1-209ENST00000493109 ZBTB33Q86T24 672 aa12.73□□□□□ -0.37
COL12A1-209ENST00000493109 KCTD17Q8N5Z5 321 aa12.73□□□□□ -0.37
COL12A1-209ENST00000493109 ADAM32Q8TC27 787 aa12.73□□□□□ -0.37
COL12A1-209ENST00000493109 GPBP1L1Q9HC44 474 aaPredicted RBP12.73□□□□□ -0.37
COL12A1-209ENST00000493109 TMPRSS4Q9NRS4 437 aa12.73□□□□□ -0.37
COL12A1-209ENST00000493109 HMX1Q9NP08 348 aaPredicted RBP12.72□□□□□ -0.37
COL12A1-209ENST00000493109 SENP3-EIF4A1A0A087X0R7 540 aa12.71□□□□□ -0.37
COL12A1-209ENST00000493109 KDF1Q8NAX2 398 aaPredicted RBP12.71□□□□□ -0.37
COL12A1-209ENST00000493109 RNF217Q8TC41 542 aa12.71□□□□□ -0.37
COL12A1-209ENST00000493109 WHAMMQ8TF30 809 aa12.71□□□□□ -0.37
COL12A1-209ENST00000493109 ADAMTS8Q9UP79 889 aa12.71□□□□□ -0.37
COL12A1-209ENST00000493109 ITGA6P23229 1130 aa12.7□□□□□ -0.38
COL12A1-209ENST00000493109 DHX9Q08211 1270 aaKnown RBP12.7□□□□□ -0.38
COL12A1-209ENST00000493109 FAM117AQ9C073 453 aa12.7□□□□□ -0.38
COL12A1-209ENST00000493109 VWA5B2Q8N398 1253 aa12.69□□□□□ -0.38
COL12A1-209ENST00000493109 LILRA1O75019 489 aa12.68□□□□□ -0.38
COL12A1-209ENST00000493109 ADD1P35611 737 aaKnown RBP12.68□□□□□ -0.38
COL12A1-209ENST00000493109 PTK2Q05397 1052 aa12.68□□□□□ -0.38
COL12A1-209ENST00000493109 FOXD4L5Q5VV16 416 aaPredicted RBP12.68□□□□□ -0.38
COL12A1-209ENST00000493109 ZNF784Q8NCA9 323 aaPredicted RBP12.68□□□□□ -0.38
COL12A1-209ENST00000493109 ZNF395Q9H8N7 513 aaPredicted RBP12.68□□□□□ -0.38
COL12A1-209ENST00000493109 KDM4CQ9H3R0 1056 aa12.67□□□□□ -0.38
COL12A1-209ENST00000493109 GPSM3Q9Y4H4 160 aa12.67□□□□□ -0.38
COL12A1-209ENST00000493109 AP1G2O75843 785 aa12.66□□□□□ -0.38
COL12A1-209ENST00000493109 SLURP2P0DP57 97 aa12.66□□□□□ -0.38
COL12A1-209ENST00000493109 RASSF7Q02833 373 aa12.66□□□□□ -0.38
COL12A1-209ENST00000493109 POLMQ9NP87 494 aaPredicted RBP12.66□□□□□ -0.38
COL12A1-209ENST00000493109 SUZ12Q15022 739 aaKnown RBP12.65□□□□□ -0.38
COL12A1-209ENST00000493109 CDC14CA4D256 554 aa12.64□□□□□ -0.39
COL12A1-209ENST00000493109 ARHGEF15O94989 841 aa12.64□□□□□ -0.39
COL12A1-209ENST00000493109 ADH1AP07327 375 aa12.64□□□□□ -0.39
COL12A1-209ENST00000493109 ERVH48-1M5A8F1 160 aa12.63□□□□□ -0.39
COL12A1-209ENST00000493109 USP17L8P0C7I0 530 aa12.63□□□□□ -0.39
COL12A1-209ENST00000493109 RAB15P59190 212 aa12.63□□□□□ -0.39
COL12A1-209ENST00000493109 CUEDC1Q9NWM3 386 aaPredicted RBP12.63□□□□□ -0.39
COL12A1-209ENST00000493109 ESPNB1AK53 854 aa12.62□□□□□ -0.39
COL12A1-209ENST00000493109 TMEM151AQ8N4L1 468 aa12.62□□□□□ -0.39
COL12A1-209ENST00000493109 GDF11O95390 407 aa12.61□□□□□ -0.39
COL12A1-209ENST00000493109 NBPF20Q3BBV1 942 aa12.61□□□□□ -0.39
COL12A1-209ENST00000493109 SV2AQ7L0J3 742 aa12.61□□□□□ -0.39
COL12A1-209ENST00000493109 SVOPQ8N4V2 548 aa12.61□□□□□ -0.39
COL12A1-209ENST00000493109 PTGIRP43119 386 aa12.59□□□□□ -0.39
COL12A1-209ENST00000493109 DDRGK1Q96HY6 314 aa12.59□□□□□ -0.39
COL12A1-209ENST00000493109 GAS6Q14393 721 aa12.58□□□□□ -0.4
COL12A1-209ENST00000493109 TRIM34Q9BYJ4 488 aa12.58□□□□□ -0.4
COL12A1-209ENST00000493109 DZIP3Q86Y13 1208 aaKnown RBP12.57□□□□□ -0.4
COL12A1-209ENST00000493109 RFC5P40937 340 aa12.55□□□□□ -0.4
COL12A1-209ENST00000493109 RNF225M0QZC1 329 aaPredicted RBP12.54□□□□□ -0.4
COL12A1-209ENST00000493109 LYPD4Q6UWN0 246 aa12.54□□□□□ -0.4
COL12A1-209ENST00000493109 CYLDQ9NQC7 956 aa12.54□□□□□ -0.4
COL12A1-209ENST00000493109 ADAMTS2O95450 1211 aa12.53□□□□□ -0.4
COL12A1-209ENST00000493109 ATP1B4Q9UN42 357 aaPredicted RBP12.53□□□□□ -0.4
COL12A1-209ENST00000493109 LYSMD3Q7Z3D4 306 aa12.52□□□□□ -0.41
COL12A1-209ENST00000493109 RHOQP17081 205 aa12.51□□□□□ -0.41
COL12A1-209ENST00000493109 IRS1P35568 1242 aa12.51□□□□□ -0.41
COL12A1-209ENST00000493109 RNF144AP50876 292 aaPredicted RBP12.49□□□□□ -0.41
COL12A1-209ENST00000493109 PRICKLE2Q7Z3G6 844 aa12.49□□□□□ -0.41
COL12A1-209ENST00000493109 SRSF11Q05519 484 aaKnown RBP12.48□□□□□ -0.41
COL12A1-209ENST00000493109 SEPT12Q8IYM1 358 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms