RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 PER1O15534 1290 aaPredicted RBP19.1■□□□□ 0.65
CCM2-217ENST00000492883 TNNT2P45379 298 aaPredicted RBP19.1■□□□□ 0.65
CCM2-217ENST00000492883 TOM1L2Q6ZVM7 507 aa19.1■□□□□ 0.65
CCM2-217ENST00000492883 MORC1Q86VD1 984 aa19.1■□□□□ 0.65
CCM2-217ENST00000492883 IP6K1Q92551 441 aa19.1■□□□□ 0.65
CCM2-217ENST00000492883 A0A0G2JS52 829 aa19.09■□□□□ 0.65
CCM2-217ENST00000492883 MYT1Q01538 1121 aa19.09■□□□□ 0.65
CCM2-217ENST00000492883 FAM98CQ17RN3 349 aaKnown RBP19.08■□□□□ 0.64
CCM2-217ENST00000492883 AMER1Q5JTC6 1135 aaPredicted RBP19.08■□□□□ 0.64
CCM2-217ENST00000492883 PLCH1Q4KWH8 1693 aa19.08■□□□□ 0.64
CCM2-217ENST00000492883 NSD2O96028 1365 aa19.07■□□□□ 0.64
CCM2-217ENST00000492883 SPATA31A1Q5TZJ5 1347 aa19.07■□□□□ 0.64
CCM2-217ENST00000492883 PPM1GO15355 546 aaPredicted RBP19.07■□□□□ 0.64
CCM2-217ENST00000492883 CNGB1Q14028 1251 aaPredicted RBP19.07■□□□□ 0.64
CCM2-217ENST00000492883 COL5A2P05997 1499 aaPredicted RBP19.07■□□□□ 0.64
CCM2-217ENST00000492883 WDR17Q8IZU2 1322 aa19.06■□□□□ 0.64
CCM2-217ENST00000492883 NWD2Q9ULI1 1742 aa19.06■□□□□ 0.64
CCM2-217ENST00000492883 HOXC9P31274 260 aa19.06■□□□□ 0.64
CCM2-217ENST00000492883 CC2D1BQ5T0F9 858 aaKnown RBP19.06■□□□□ 0.64
CCM2-217ENST00000492883 SEPT12Q8IYM1 358 aa19.06■□□□□ 0.64
CCM2-217ENST00000492883 TCP11L2Q8N4U5 519 aa19.06■□□□□ 0.64
CCM2-217ENST00000492883 ANKRD24Q8TF21 1146 aa19.06■□□□□ 0.64
CCM2-217ENST00000492883 LTV1Q96GA3 475 aaPredicted RBP19.06■□□□□ 0.64
CCM2-217ENST00000492883 USP54Q70EL1 1684 aa19.05■□□□□ 0.64
CCM2-217ENST00000492883 CDK12Q9NYV4 1490 aaPredicted RBP19.05■□□□□ 0.64
CCM2-217ENST00000492883 ONECUT3O60422 494 aaPredicted RBP19.05■□□□□ 0.64
CCM2-217ENST00000492883 RGS12O14924 1447 aa19.04■□□□□ 0.64
CCM2-217ENST00000492883 EMILIN1Q9Y6C2 1016 aa19.04■□□□□ 0.64
CCM2-217ENST00000492883 LMO7Q8WWI1 1683 aa19.04■□□□□ 0.64
CCM2-217ENST00000492883 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.03■□□□□ 0.64
CCM2-217ENST00000492883 CRB1P82279 1406 aa19.03■□□□□ 0.64
CCM2-217ENST00000492883 NLRP2Q9NX02 1062 aa19.03■□□□□ 0.64
CCM2-217ENST00000492883 THRAP3Q9Y2W1 955 aaKnown RBP19.03■□□□□ 0.64
CCM2-217ENST00000492883 ERBB3P21860 1342 aa19.02■□□□□ 0.64
CCM2-217ENST00000492883 BARGINQ6ZT62 677 aa19.02■□□□□ 0.64
CCM2-217ENST00000492883 CARD10Q9BWT7 1032 aa19.02■□□□□ 0.64
CCM2-217ENST00000492883 POLKQ9UBT6 870 aa19.02■□□□□ 0.64
CCM2-217ENST00000492883 NRAPQ86VF7 1730 aa19.02■□□□□ 0.63
CCM2-217ENST00000492883 BLMP54132 1417 aaPredicted RBP19.01■□□□□ 0.63
CCM2-217ENST00000492883 DDX10Q13206 875 aaKnown RBP19.01■□□□□ 0.63
CCM2-217ENST00000492883 HSP90AB2PQ58FF8 381 aa19.01■□□□□ 0.63
CCM2-217ENST00000492883 RTL1A6NKG5 1358 aa19.01■□□□□ 0.63
CCM2-217ENST00000492883 GLI3P10071 1580 aa19.01■□□□□ 0.63
CCM2-217ENST00000492883 KIF24Q5T7B8 1368 aa19■□□□□ 0.63
CCM2-217ENST00000492883 KIF20BQ96Q89 1820 aa19■□□□□ 0.63
CCM2-217ENST00000492883 ABCC6O95255 1503 aa19■□□□□ 0.63
CCM2-217ENST00000492883 FLT4P35916 1363 aa18.99■□□□□ 0.63
CCM2-217ENST00000492883 SOCS7O14512 581 aa18.99■□□□□ 0.63
CCM2-217ENST00000492883 COL18A1P39060 1754 aa18.98■□□□□ 0.63
CCM2-217ENST00000492883 NPC1L1Q9UHC9 1359 aa18.98■□□□□ 0.63
CCM2-217ENST00000492883 INSRP06213 1382 aa18.97■□□□□ 0.63
CCM2-217ENST00000492883 KRT27Q7Z3Y8 459 aa18.97■□□□□ 0.63
CCM2-217ENST00000492883 ZNF316A6NFI3 1004 aaPredicted RBP18.96■□□□□ 0.63
CCM2-217ENST00000492883 CDCA7Q9BWT1 371 aaPredicted RBP18.96■□□□□ 0.63
CCM2-217ENST00000492883 SMG6Q86US8 1419 aaKnown RBP18.95■□□□□ 0.62
CCM2-217ENST00000492883 PDE3BQ13370 1112 aa18.95■□□□□ 0.62
CCM2-217ENST00000492883 MTHFSP49914 203 aa18.93■□□□□ 0.62
CCM2-217ENST00000492883 NBPF6Q5VWK0 638 aa18.93■□□□□ 0.62
CCM2-217ENST00000492883 NBPF4Q96M43 638 aa18.93■□□□□ 0.62
CCM2-217ENST00000492883 LTN1O94822 1766 aa18.92■□□□□ 0.62
CCM2-217ENST00000492883 IL2RBP14784 551 aa18.92■□□□□ 0.62
CCM2-217ENST00000492883 DDB1Q16531 1140 aa18.92■□□□□ 0.62
CCM2-217ENST00000492883 EXOC5O00471 708 aa18.91■□□□□ 0.62
CCM2-217ENST00000492883 EIF4A2Q14240 407 aaKnown RBP18.9■□□□□ 0.62
CCM2-217ENST00000492883 FAM182BQ5T319 152 aa18.9■□□□□ 0.62
CCM2-217ENST00000492883 USHBP1Q8N6Y0 703 aa18.9■□□□□ 0.62
CCM2-217ENST00000492883 UPF1Q92900 1129 aaKnown RBP eCLIP18.88■□□□□ 0.61
CCM2-217ENST00000492883 RAPGEF4Q8WZA2 1011 aa18.87■□□□□ 0.61
CCM2-217ENST00000492883 EYA1Q99502 592 aa18.87■□□□□ 0.61
CCM2-217ENST00000492883 RGPD5Q99666 1765 aa18.87■□□□□ 0.61
CCM2-217ENST00000492883 PEAK1Q9H792 1746 aa18.87■□□□□ 0.61
CCM2-217ENST00000492883 ANKRD26Q9UPS8 1709 aa18.87■□□□□ 0.61
CCM2-217ENST00000492883 FAM196AQ6ZSG2 479 aa18.86■□□□□ 0.61
CCM2-217ENST00000492883 DISP2A7MBM2 1401 aa18.85■□□□□ 0.61
CCM2-217ENST00000492883 PPP2R1AP30153 589 aa18.85■□□□□ 0.61
CCM2-217ENST00000492883 TATP17735 454 aaPredicted RBP18.84■□□□□ 0.61
CCM2-217ENST00000492883 THSD7AQ9UPZ6 1657 aa18.84■□□□□ 0.61
CCM2-217ENST00000492883 DIAPH1O60610 1272 aaKnown RBP18.83■□□□□ 0.6
CCM2-217ENST00000492883 IL13P35225 146 aa18.83■□□□□ 0.6
CCM2-217ENST00000492883 CFAP53Q96M91 514 aa18.83■□□□□ 0.6
CCM2-217ENST00000492883 RALBP1Q15311 655 aa18.82■□□□□ 0.6
CCM2-217ENST00000492883 CCDC125Q86Z20 511 aa18.82■□□□□ 0.6
CCM2-217ENST00000492883 MARCH10Q8NA82 808 aaPredicted RBP18.82■□□□□ 0.6
CCM2-217ENST00000492883 ZCRB1Q8TBF4 217 aaKnown RBP18.82■□□□□ 0.6
CCM2-217ENST00000492883 DDX54Q8TDD1 881 aaKnown RBP18.82■□□□□ 0.6
CCM2-217ENST00000492883 SF3B2Q13435 895 aaKnown RBP18.81■□□□□ 0.6
CCM2-217ENST00000492883 MAP2P11137 1827 aaKnown RBP18.8■□□□□ 0.6
CCM2-217ENST00000492883 IGSF1Q8N6C5 1336 aa18.79■□□□□ 0.6
CCM2-217ENST00000492883 PARD3Q8TEW0 1356 aa18.79■□□□□ 0.6
CCM2-217ENST00000492883 TNS2Q63HR2 1409 aa18.78■□□□□ 0.6
CCM2-217ENST00000492883 TRIM37O94972 964 aa18.78■□□□□ 0.6
CCM2-217ENST00000492883 SULT6B1Q6IMI4 303 aa18.78■□□□□ 0.6
CCM2-217ENST00000492883 FAM208AQ9UK61 1670 aaKnown RBP18.77■□□□□ 0.6
CCM2-217ENST00000492883 U2SURPO15042 1029 aaKnown RBP18.77■□□□□ 0.6
CCM2-217ENST00000492883 SPG7Q9UQ90 795 aa18.77■□□□□ 0.6
CCM2-217ENST00000492883 MEGF6O75095 1541 aa18.77■□□□□ 0.6
CCM2-217ENST00000492883 OVOS2A0A0G2JMS6 1433 aa18.76■□□□□ 0.59
CCM2-217ENST00000492883 AEBP1Q8IUX7 1158 aa18.76■□□□□ 0.59
CCM2-217ENST00000492883 NUDCQ9Y266 331 aa18.76■□□□□ 0.59
CCM2-217ENST00000492883 PARP4Q9UKK3 1724 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms