RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 COL18A1P39060 1754 aa9.99□□□□□ -0.81
PDLIM1-204ENST00000492511 COG3Q96JB2 828 aa9.99□□□□□ -0.81
PDLIM1-204ENST00000492511 POLR3GLQ9BT43 218 aa9.99□□□□□ -0.81
PDLIM1-204ENST00000492511 GGNBP2Q9H3C7 697 aa9.99□□□□□ -0.81
PDLIM1-204ENST00000492511 USP35Q9P2H5 1018 aa9.99□□□□□ -0.81
PDLIM1-204ENST00000492511 USP54Q70EL1 1684 aa9.99□□□□□ -0.81
PDLIM1-204ENST00000492511 BARGINQ6ZT62 677 aa9.98□□□□□ -0.81
PDLIM1-204ENST00000492511 MYOM1P52179 1685 aa9.98□□□□□ -0.81
PDLIM1-204ENST00000492511 KRT27Q7Z3Y8 459 aa9.97□□□□□ -0.81
PDLIM1-204ENST00000492511 TCP11L2Q8N4U5 519 aa9.97□□□□□ -0.81
PDLIM1-204ENST00000492511 PANK3Q9H999 370 aa9.97□□□□□ -0.81
PDLIM1-204ENST00000492511 KIF7Q2M1P5 1343 aa9.97□□□□□ -0.81
PDLIM1-204ENST00000492511 WDR17Q8IZU2 1322 aa9.97□□□□□ -0.81
PDLIM1-204ENST00000492511 NSD3Q9BZ95 1437 aa9.97□□□□□ -0.81
PDLIM1-204ENST00000492511 FAM182BQ5T319 152 aa9.96□□□□□ -0.82
PDLIM1-204ENST00000492511 IP6K1Q92551 441 aa9.96□□□□□ -0.82
PDLIM1-204ENST00000492511 THRAP3Q9Y2W1 955 aaKnown RBP9.96□□□□□ -0.82
PDLIM1-204ENST00000492511 MAP3K19Q56UN5 1328 aa9.96□□□□□ -0.82
PDLIM1-204ENST00000492511 CRB1P82279 1406 aa9.96□□□□□ -0.82
PDLIM1-204ENST00000492511 A0A0G2JS52 829 aa9.95□□□□□ -0.82
PDLIM1-204ENST00000492511 MYT1Q01538 1121 aa9.95□□□□□ -0.82
PDLIM1-204ENST00000492511 SF3B2Q13435 895 aaKnown RBP9.95□□□□□ -0.82
PDLIM1-204ENST00000492511 RRS1Q15050 365 aaKnown RBP9.95□□□□□ -0.82
PDLIM1-204ENST00000492511 TOM1L2Q6ZVM7 507 aa9.95□□□□□ -0.82
PDLIM1-204ENST00000492511 CARD10Q9BWT7 1032 aa9.95□□□□□ -0.82
PDLIM1-204ENST00000492511 THSD7AQ9UPZ6 1657 aa9.95□□□□□ -0.82
PDLIM1-204ENST00000492511 SRCAPQ6ZRS2 3230 aa9.95□□□□□ -0.82
PDLIM1-204ENST00000492511 ERBB3P21860 1342 aa9.94□□□□□ -0.82
PDLIM1-204ENST00000492511 HOXC9P31274 260 aa9.94□□□□□ -0.82
PDLIM1-204ENST00000492511 ANKRD24Q8TF21 1146 aa9.94□□□□□ -0.82
PDLIM1-204ENST00000492511 BRWD3Q6RI45 1802 aa9.93□□□□□ -0.82
PDLIM1-204ENST00000492511 ABCC6O95255 1503 aa9.93□□□□□ -0.82
PDLIM1-204ENST00000492511 WASHC2AQ641Q2 1341 aa9.93□□□□□ -0.82
PDLIM1-204ENST00000492511 CSB-PGBD3P0DP91 1061 aa9.93□□□□□ -0.82
PDLIM1-204ENST00000492511 DISP2A7MBM2 1401 aa9.92□□□□□ -0.82
PDLIM1-204ENST00000492511 BLMP54132 1417 aaPredicted RBP9.92□□□□□ -0.82
PDLIM1-204ENST00000492511 CGNL1Q0VF96 1302 aa9.92□□□□□ -0.82
PDLIM1-204ENST00000492511 PER1O15534 1290 aaPredicted RBP9.92□□□□□ -0.82
PDLIM1-204ENST00000492511 AMPHP49418 695 aa9.92□□□□□ -0.82
PDLIM1-204ENST00000492511 CCDC7Q96M83 1385 aa9.91□□□□□ -0.82
PDLIM1-204ENST00000492511 HSP90AB2PQ58FF8 381 aa9.91□□□□□ -0.82
PDLIM1-204ENST00000492511 LTV1Q96GA3 475 aaPredicted RBP9.91□□□□□ -0.82
PDLIM1-204ENST00000492511 NLRP2Q9NX02 1062 aa9.91□□□□□ -0.82
PDLIM1-204ENST00000492511 EMILIN1Q9Y6C2 1016 aa9.91□□□□□ -0.82
PDLIM1-204ENST00000492511 RGPD5Q99666 1765 aa9.91□□□□□ -0.82
PDLIM1-204ENST00000492511 PDE3BQ13370 1112 aa9.9□□□□□ -0.82
PDLIM1-204ENST00000492511 AMER1Q5JTC6 1135 aaPredicted RBP9.9□□□□□ -0.82
PDLIM1-204ENST00000492511 POLKQ9UBT6 870 aa9.9□□□□□ -0.82
PDLIM1-204ENST00000492511 RTL1A6NKG5 1358 aa9.89□□□□□ -0.83
PDLIM1-204ENST00000492511 LTN1O94822 1766 aa9.89□□□□□ -0.83
PDLIM1-204ENST00000492511 DDB1Q16531 1140 aa9.89□□□□□ -0.83
PDLIM1-204ENST00000492511 NBPF6Q5VWK0 638 aa9.89□□□□□ -0.83
PDLIM1-204ENST00000492511 FAM196AQ6ZSG2 479 aa9.89□□□□□ -0.83
PDLIM1-204ENST00000492511 DEFB132Q7Z7B7 95 aa9.89□□□□□ -0.83
PDLIM1-204ENST00000492511 MARCH10Q8NA82 808 aaPredicted RBP9.89□□□□□ -0.83
PDLIM1-204ENST00000492511 NBPF4Q96M43 638 aa9.89□□□□□ -0.83
PDLIM1-204ENST00000492511 CDCA7Q9BWT1 371 aaPredicted RBP9.89□□□□□ -0.83
PDLIM1-204ENST00000492511 PEAK1Q9H792 1746 aa9.88□□□□□ -0.83
PDLIM1-204ENST00000492511 TNNT2P45379 298 aaPredicted RBP9.88□□□□□ -0.83
PDLIM1-204ENST00000492511 KNSTRNQ9Y448 316 aa9.88□□□□□ -0.83
PDLIM1-204ENST00000492511 KIF20BQ96Q89 1820 aa9.88□□□□□ -0.83
PDLIM1-204ENST00000492511 LRP5O75197 1615 aa9.88□□□□□ -0.83
PDLIM1-204ENST00000492511 INSRP06213 1382 aa9.88□□□□□ -0.83
PDLIM1-204ENST00000492511 KIF24Q5T7B8 1368 aa9.88□□□□□ -0.83
PDLIM1-204ENST00000492511 EXOC5O00471 708 aa9.87□□□□□ -0.83
PDLIM1-204ENST00000492511 TRIM37O94972 964 aa9.87□□□□□ -0.83
PDLIM1-204ENST00000492511 IL2RBP14784 551 aa9.87□□□□□ -0.83
PDLIM1-204ENST00000492511 PARP4Q9UKK3 1724 aaKnown RBP9.87□□□□□ -0.83
PDLIM1-204ENST00000492511 NSD2O96028 1365 aa9.87□□□□□ -0.83
PDLIM1-204ENST00000492511 FLT4P35916 1363 aa9.87□□□□□ -0.83
PDLIM1-204ENST00000492511 PPM1GO15355 546 aaPredicted RBP9.86□□□□□ -0.83
PDLIM1-204ENST00000492511 PTF1AQ7RTS3 328 aa9.86□□□□□ -0.83
PDLIM1-204ENST00000492511 USHBP1Q8N6Y0 703 aa9.86□□□□□ -0.83
PDLIM1-204ENST00000492511 LRRC37A3O60309 1634 aa9.85□□□□□ -0.83
PDLIM1-204ENST00000492511 BAG6P46379 1132 aa9.85□□□□□ -0.83
PDLIM1-204ENST00000492511 EN1Q05925 392 aaPredicted RBP9.85□□□□□ -0.83
PDLIM1-204ENST00000492511 MORC1Q86VD1 984 aa9.85□□□□□ -0.83
PDLIM1-204ENST00000492511 BCL9O00512 1426 aa9.84□□□□□ -0.83
PDLIM1-204ENST00000492511 TNS2Q63HR2 1409 aa9.84□□□□□ -0.83
PDLIM1-204ENST00000492511 EIF4A2Q14240 407 aaKnown RBP9.84□□□□□ -0.83
PDLIM1-204ENST00000492511 CAMKK2Q96RR4 588 aa9.84□□□□□ -0.83
PDLIM1-204ENST00000492511 RGPD1P0DJD0 1748 aa9.84□□□□□ -0.83
PDLIM1-204ENST00000492511 FAM208AQ9UK61 1670 aaKnown RBP9.83□□□□□ -0.84
PDLIM1-204ENST00000492511 OVOS2A0A0G2JMS6 1433 aa9.83□□□□□ -0.84
PDLIM1-204ENST00000492511 MEGF6O75095 1541 aa9.83□□□□□ -0.84
PDLIM1-204ENST00000492511 APBA3O96018 575 aa9.83□□□□□ -0.84
PDLIM1-204ENST00000492511 EZH2Q15910 746 aaKnown RBP9.83□□□□□ -0.84
PDLIM1-204ENST00000492511 CC2D1BQ5T0F9 858 aaKnown RBP9.83□□□□□ -0.84
PDLIM1-204ENST00000492511 EYA1Q99502 592 aa9.83□□□□□ -0.84
PDLIM1-204ENST00000492511 NCAPD2Q15021 1401 aa9.82□□□□□ -0.84
PDLIM1-204ENST00000492511 SMG6Q86US8 1419 aaKnown RBP9.82□□□□□ -0.84
PDLIM1-204ENST00000492511 WNK3Q9BYP7 1800 aa9.82□□□□□ -0.84
PDLIM1-204ENST00000492511 KCNQ2O43526 872 aa9.82□□□□□ -0.84
PDLIM1-204ENST00000492511 ZCRB1Q8TBF4 217 aaKnown RBP9.82□□□□□ -0.84
PDLIM1-204ENST00000492511 BCL11BQ9C0K0 894 aaPredicted RBP9.82□□□□□ -0.84
PDLIM1-204ENST00000492511 NPC1L1Q9UHC9 1359 aa9.82□□□□□ -0.84
PDLIM1-204ENST00000492511 ANKRD26Q9UPS8 1709 aa9.82□□□□□ -0.84
PDLIM1-204ENST00000492511 DDX54Q8TDD1 881 aaKnown RBP9.81□□□□□ -0.84
PDLIM1-204ENST00000492511 RGPD2P0DJD1 1756 aa9.8□□□□□ -0.84
PDLIM1-204ENST00000492511 TNS1Q9HBL0 1735 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms