RNA–Protein interactions for RNA: ENST00000492487.5

SMYD3-216, Transcript of SET and MYND domain containing 3, humanhuman

TSL 3

Gene SMYD3, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-216ENST00000492487 PARD3Q8TEW0 1356 aa11.13□□□□□ -0.63
SMYD3-216ENST00000492487 COL14A1Q05707 1796 aaKnown RBP11.13□□□□□ -0.63
SMYD3-216ENST00000492487 SMG6Q86US8 1419 aaKnown RBP11.12□□□□□ -0.63
SMYD3-216ENST00000492487 NEFMP07197 916 aa11.12□□□□□ -0.63
SMYD3-216ENST00000492487 RXRBP28702 533 aa11.12□□□□□ -0.63
SMYD3-216ENST00000492487 QTRT2Q9H974 415 aaKnown RBP11.12□□□□□ -0.63
SMYD3-216ENST00000492487 ABCC6O95255 1503 aa11.12□□□□□ -0.63
SMYD3-216ENST00000492487 RTL1A6NKG5 1358 aa11.12□□□□□ -0.63
SMYD3-216ENST00000492487 CPDO75976 1380 aa11.12□□□□□ -0.63
SMYD3-216ENST00000492487 EVA1CP58658 441 aa11.11□□□□□ -0.63
SMYD3-216ENST00000492487 RBM6P78332 1123 aaKnown RBP11.11□□□□□ -0.63
SMYD3-216ENST00000492487 CABLES1Q8TDN4 633 aa11.11□□□□□ -0.63
SMYD3-216ENST00000492487 USP21Q9UK80 565 aa11.11□□□□□ -0.63
SMYD3-216ENST00000492487 NWD2Q9ULI1 1742 aa11.11□□□□□ -0.63
SMYD3-216ENST00000492487 CDK12Q9NYV4 1490 aaPredicted RBP11.11□□□□□ -0.63
SMYD3-216ENST00000492487 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.1□□□□□ -0.63
SMYD3-216ENST00000492487 IFFO2Q5TF58 517 aa11.1□□□□□ -0.63
SMYD3-216ENST00000492487 ARHGEF25Q86VW2 580 aa11.1□□□□□ -0.63
SMYD3-216ENST00000492487 IP6K1Q92551 441 aa11.1□□□□□ -0.63
SMYD3-216ENST00000492487 TRPC5Q9UL62 973 aaPredicted RBP11.1□□□□□ -0.63
SMYD3-216ENST00000492487 BCL9LQ86UU0 1499 aa11.1□□□□□ -0.63
SMYD3-216ENST00000492487 FAM208AQ9UK61 1670 aaKnown RBP11.09□□□□□ -0.63
SMYD3-216ENST00000492487 FLT4P35916 1363 aa11.09□□□□□ -0.63
SMYD3-216ENST00000492487 CCER2I3L3R5 266 aa11.09□□□□□ -0.63
SMYD3-216ENST00000492487 PPM1GO15355 546 aaPredicted RBP11.09□□□□□ -0.63
SMYD3-216ENST00000492487 TNNT2P45379 298 aaPredicted RBP11.09□□□□□ -0.63
SMYD3-216ENST00000492487 ZC3H6P61129 1189 aaKnown RBP11.09□□□□□ -0.63
SMYD3-216ENST00000492487 SLIT2O94813 1529 aa11.09□□□□□ -0.63
SMYD3-216ENST00000492487 BLMP54132 1417 aaPredicted RBP11.09□□□□□ -0.63
SMYD3-216ENST00000492487 RGPD2P0DJD1 1756 aa11.08□□□□□ -0.64
SMYD3-216ENST00000492487 CAMTA1Q9Y6Y1 1673 aa11.08□□□□□ -0.64
SMYD3-216ENST00000492487 WNK3Q9BYP7 1800 aa11.08□□□□□ -0.64
SMYD3-216ENST00000492487 ZBTB7CA1YPR0 619 aa11.08□□□□□ -0.64
SMYD3-216ENST00000492487 SOX12O15370 315 aa11.08□□□□□ -0.64
SMYD3-216ENST00000492487 PLEKHG5O94827 1062 aa11.08□□□□□ -0.64
SMYD3-216ENST00000492487 CSB-PGBD3P0DP91 1061 aa11.08□□□□□ -0.64
SMYD3-216ENST00000492487 PPP2R1AP30153 589 aa11.08□□□□□ -0.64
SMYD3-216ENST00000492487 MTHFSP49914 203 aa11.08□□□□□ -0.64
SMYD3-216ENST00000492487 CNGB1Q14028 1251 aaPredicted RBP11.08□□□□□ -0.64
SMYD3-216ENST00000492487 UPF1Q92900 1129 aaKnown RBP eCLIP11.08□□□□□ -0.641e-7■■□□□ 13.1
SMYD3-216ENST00000492487 POLKQ9UBT6 870 aa11.08□□□□□ -0.64
SMYD3-216ENST00000492487 ATRNO75882 1429 aa11.08□□□□□ -0.64
SMYD3-216ENST00000492487 COL3A1P02461 1466 aaPredicted RBP11.07□□□□□ -0.64
SMYD3-216ENST00000492487 RGPD1P0DJD0 1748 aa11.07□□□□□ -0.64
SMYD3-216ENST00000492487 FAM83GA6ND36 823 aa11.07□□□□□ -0.64
SMYD3-216ENST00000492487 DIAPH1O60610 1272 aaKnown RBP11.07□□□□□ -0.64
SMYD3-216ENST00000492487 UNC5CLQ8IV45 518 aa11.07□□□□□ -0.64
SMYD3-216ENST00000492487 INSRP06213 1382 aa11.06□□□□□ -0.64
SMYD3-216ENST00000492487 KIAA0232Q92628 1395 aa11.06□□□□□ -0.64
SMYD3-216ENST00000492487 FBLN1P23142 703 aa11.06□□□□□ -0.64
SMYD3-216ENST00000492487 HOXC9P31274 260 aa11.06□□□□□ -0.64
SMYD3-216ENST00000492487 WDR43Q15061 677 aaKnown RBP eCLIP11.06□□□□□ -0.643e-6■■■□□ 18.2
SMYD3-216ENST00000492487 CDCA7Q9BWT1 371 aaPredicted RBP11.06□□□□□ -0.64
SMYD3-216ENST00000492487 MAP3K19Q56UN5 1328 aa11.06□□□□□ -0.64
SMYD3-216ENST00000492487 CNKSR2Q8WXI2 1034 aa11.05□□□□□ -0.64
SMYD3-216ENST00000492487 GJD4Q96KN9 370 aaPredicted RBP11.05□□□□□ -0.64
SMYD3-216ENST00000492487 THRAP3Q9Y2W1 955 aaKnown RBP11.05□□□□□ -0.64
SMYD3-216ENST00000492487 RRS1Q15050 365 aaKnown RBP11.04□□□□□ -0.64
SMYD3-216ENST00000492487 EMILIN1Q9Y6C2 1016 aa11.04□□□□□ -0.64
SMYD3-216ENST00000492487 COL5A2P05997 1499 aaPredicted RBP11.04□□□□□ -0.64
SMYD3-216ENST00000492487 RGS12O14924 1447 aa11.03□□□□□ -0.64
SMYD3-216ENST00000492487 VPS72Q15906 364 aa11.03□□□□□ -0.64
SMYD3-216ENST00000492487 TOM1L2Q6ZVM7 507 aa11.03□□□□□ -0.64
SMYD3-216ENST00000492487 MRS2Q9HD23 443 aa11.03□□□□□ -0.64
SMYD3-216ENST00000492487 BTG4Q9NY30 223 aa11.03□□□□□ -0.64
SMYD3-216ENST00000492487 PLEKHG2Q9H7P9 1386 aa11.03□□□□□ -0.64
SMYD3-216ENST00000492487 ONECUT3O60422 494 aaPredicted RBP11.02□□□□□ -0.65
SMYD3-216ENST00000492487 ANKRD24Q8TF21 1146 aa11.02□□□□□ -0.65
SMYD3-216ENST00000492487 FCHSD2O94868 740 aa11.01□□□□□ -0.65
SMYD3-216ENST00000492487 NGEFQ8N5V2 710 aa11.01□□□□□ -0.65
SMYD3-216ENST00000492487 NLRP2Q9NX02 1062 aa11.01□□□□□ -0.65
SMYD3-216ENST00000492487 CCDC9Q9Y3X0 531 aaKnown RBP11.01□□□□□ -0.65
SMYD3-216ENST00000492487 WDR17Q8IZU2 1322 aa11.01□□□□□ -0.65
SMYD3-216ENST00000492487 U2SURPO15042 1029 aaKnown RBP11□□□□□ -0.65
SMYD3-216ENST00000492487 CHRNA2Q15822 529 aa11□□□□□ -0.65
SMYD3-216ENST00000492487 HSP90AB2PQ58FF8 381 aa11□□□□□ -0.65
SMYD3-216ENST00000492487 RAPGEF4Q8WZA2 1011 aa11□□□□□ -0.65
SMYD3-216ENST00000492487 CARD10Q9BWT7 1032 aa11□□□□□ -0.65
SMYD3-216ENST00000492487 STRN4Q9NRL3 753 aa11□□□□□ -0.65
SMYD3-216ENST00000492487 ERBB3P21860 1342 aa11□□□□□ -0.65
SMYD3-216ENST00000492487 U2AF1L5P0DN76 240 aaPredicted RBP10.99□□□□□ -0.65
SMYD3-216ENST00000492487 U2AF1Q01081 240 aaKnown RBP eCLIP10.99□□□□□ -0.65
SMYD3-216ENST00000492487 AMOTQ4VCS5 1084 aa10.99□□□□□ -0.65
SMYD3-216ENST00000492487 LTV1Q96GA3 475 aaPredicted RBP10.99□□□□□ -0.65
SMYD3-216ENST00000492487 GLI3P10071 1580 aa10.99□□□□□ -0.65
SMYD3-216ENST00000492487 SHANK3Q9BYB0 1731 aa10.98□□□□□ -0.65
SMYD3-216ENST00000492487 PARP4Q9UKK3 1724 aaKnown RBP10.98□□□□□ -0.65
SMYD3-216ENST00000492487 TATP17735 454 aaPredicted RBP10.98□□□□□ -0.65
SMYD3-216ENST00000492487 IL13P35225 146 aa10.98□□□□□ -0.65
SMYD3-216ENST00000492487 EIF4A2Q14240 407 aaKnown RBP10.98□□□□□ -0.65
SMYD3-216ENST00000492487 TCP11L2Q8N4U5 519 aa10.98□□□□□ -0.65
SMYD3-216ENST00000492487 AXIN2Q9Y2T1 843 aa10.98□□□□□ -0.65
SMYD3-216ENST00000492487 MAPK8IP3Q9UPT6 1336 aa10.98□□□□□ -0.65
SMYD3-216ENST00000492487 CRB1P82279 1406 aa10.98□□□□□ -0.65
SMYD3-216ENST00000492487 NCAPD2Q15021 1401 aa10.98□□□□□ -0.65
SMYD3-216ENST00000492487 HMGB2P26583 209 aaKnown RBP10.97□□□□□ -0.65
SMYD3-216ENST00000492487 PLEKHO1Q53GL0 409 aaPredicted RBP10.97□□□□□ -0.65
SMYD3-216ENST00000492487 BARGINQ6ZT62 677 aa10.97□□□□□ -0.65
SMYD3-216ENST00000492487 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.97□□□□□ -0.659e-6■□□□□ 9.4
SMYD3-216ENST00000492487 SPG7Q9UQ90 795 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms