RNA–Protein interactions for RNA: ENST00000492016.5

NELFCD-211, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 606 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-211ENST00000492016 MTHFSP49914 203 aa21.37■■□□□ 1.01
NELFCD-211ENST00000492016 CHRNA2Q15822 529 aa21.37■■□□□ 1.01
NELFCD-211ENST00000492016 NGLY1Q96IV0 654 aa21.37■■□□□ 1.01
NELFCD-211ENST00000492016 C8orf37Q96NL8 207 aa21.37■■□□□ 1.01
NELFCD-211ENST00000492016 CDK12Q9NYV4 1490 aaPredicted RBP21.37■■□□□ 1.01
NELFCD-211ENST00000492016 LMO7Q8WWI1 1683 aa21.37■■□□□ 1.01
NELFCD-211ENST00000492016 ZBTB7CA1YPR0 619 aa21.35■■□□□ 1.01
NELFCD-211ENST00000492016 LTN1O94822 1766 aa21.35■■□□□ 1.01
NELFCD-211ENST00000492016 COL18A1P39060 1754 aa21.35■■□□□ 1.01
NELFCD-211ENST00000492016 BTG4Q9NY30 223 aa21.34■■□□□ 1.01
NELFCD-211ENST00000492016 AXIN2Q9Y2T1 843 aa21.34■■□□□ 1.01
NELFCD-211ENST00000492016 CAMTA1Q9Y6Y1 1673 aa21.34■■□□□ 1.01
NELFCD-211ENST00000492016 NWD2Q9ULI1 1742 aa21.33■■□□□ 1.01
NELFCD-211ENST00000492016 PPM1GO15355 546 aaPredicted RBP21.33■■□□□ 1.01
NELFCD-211ENST00000492016 CFAP53Q96M91 514 aa21.33■■□□□ 1.01
NELFCD-211ENST00000492016 MAP2P11137 1827 aaKnown RBP21.32■■□□□ 1
NELFCD-211ENST00000492016 UNC5CLQ8IV45 518 aa21.32■■□□□ 1
NELFCD-211ENST00000492016 PEAK1Q9H792 1746 aa21.32■■□□□ 1
NELFCD-211ENST00000492016 COL5A2P05997 1499 aaPredicted RBP21.32■■□□□ 1
NELFCD-211ENST00000492016 ERBB3P21860 1342 aa21.31■■□□□ 1
NELFCD-211ENST00000492016 HSP90AB2PQ58FF8 381 aa21.31■■□□□ 1
NELFCD-211ENST00000492016 BCL9LQ86UU0 1499 aa21.31■■□□□ 1
NELFCD-211ENST00000492016 AFF2P51816 1311 aa21.3■■□□□ 1
NELFCD-211ENST00000492016 USP21Q9UK80 565 aa21.3■■□□□ 1
NELFCD-211ENST00000492016 PLCH1Q4KWH8 1693 aa21.3■■□□□ 1
NELFCD-211ENST00000492016 WDR17Q8IZU2 1322 aa21.29■■□□□ 1
NELFCD-211ENST00000492016 EVA1CP58658 441 aa21.29■■□□□ 1
NELFCD-211ENST00000492016 ZNF772Q68DY9 489 aaPredicted RBP21.29■■□□□ 1
NELFCD-211ENST00000492016 ANKRD24Q8TF21 1146 aa21.29■■□□□ 1
NELFCD-211ENST00000492016 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.27■■□□□ 1
NELFCD-211ENST00000492016 VPS72Q15906 364 aa21.26■□□□□ 0.99
NELFCD-211ENST00000492016 NRAPQ86VF7 1730 aa21.26■□□□□ 0.99
NELFCD-211ENST00000492016 COL3A1P02461 1466 aaPredicted RBP21.26■□□□□ 0.99
NELFCD-211ENST00000492016 DIAPH1O60610 1272 aaKnown RBP21.25■□□□□ 0.99
NELFCD-211ENST00000492016 CSB-PGBD3P0DP91 1061 aa21.25■□□□□ 0.99
NELFCD-211ENST00000492016 CRB1P82279 1406 aa21.25■□□□□ 0.99
NELFCD-211ENST00000492016 EIF4A2Q14240 407 aaKnown RBP21.25■□□□□ 0.99
NELFCD-211ENST00000492016 TRPC5Q9UL62 973 aaPredicted RBP21.25■□□□□ 0.99
NELFCD-211ENST00000492016 IL13P35225 146 aa21.24■□□□□ 0.99
NELFCD-211ENST00000492016 STRN4Q9NRL3 753 aa21.24■□□□□ 0.99
NELFCD-211ENST00000492016 ATRNO75882 1429 aa21.23■□□□□ 0.99
NELFCD-211ENST00000492016 LARP1Q6PKG0 1096 aaKnown RBP21.23■□□□□ 0.99
NELFCD-211ENST00000492016 CARD10Q9BWT7 1032 aa21.23■□□□□ 0.99
NELFCD-211ENST00000492016 NUDCQ9Y266 331 aa21.23■□□□□ 0.99
NELFCD-211ENST00000492016 FAM208AQ9UK61 1670 aaKnown RBP21.23■□□□□ 0.99
NELFCD-211ENST00000492016 TOM1L2Q6ZVM7 507 aa21.22■□□□□ 0.99
NELFCD-211ENST00000492016 LTV1Q96GA3 475 aaPredicted RBP21.22■□□□□ 0.99
NELFCD-211ENST00000492016 PHF23Q9BUL5 403 aaPredicted RBP21.22■□□□□ 0.99
NELFCD-211ENST00000492016 THRAP3Q9Y2W1 955 aaKnown RBP21.22■□□□□ 0.99
NELFCD-211ENST00000492016 SPATA31A5Q5VU36 1347 aa21.22■□□□□ 0.99
NELFCD-211ENST00000492016 SPATA31A7Q8IWB4 1347 aa21.22■□□□□ 0.99
NELFCD-211ENST00000492016 CCER2I3L3R5 266 aa21.2■□□□□ 0.98
NELFCD-211ENST00000492016 QTRT2Q9H974 415 aaKnown RBP21.2■□□□□ 0.98
NELFCD-211ENST00000492016 NLRP2Q9NX02 1062 aa21.2■□□□□ 0.98
NELFCD-211ENST00000492016 SPATA31A1Q5TZJ5 1347 aa21.2■□□□□ 0.98
NELFCD-211ENST00000492016 IGSF1Q8N6C5 1336 aa21.2■□□□□ 0.98
NELFCD-211ENST00000492016 NCAPD2Q15021 1401 aa21.2■□□□□ 0.98
NELFCD-211ENST00000492016 RGPD5Q99666 1765 aa21.19■□□□□ 0.98
NELFCD-211ENST00000492016 NBPF6Q5VWK0 638 aa21.19■□□□□ 0.98
NELFCD-211ENST00000492016 NBPF4Q96M43 638 aa21.19■□□□□ 0.98
NELFCD-211ENST00000492016 EYA1Q99502 592 aa21.19■□□□□ 0.98
NELFCD-211ENST00000492016 TCP11L2Q8N4U5 519 aa21.18■□□□□ 0.98
NELFCD-211ENST00000492016 GJD4Q96KN9 370 aaPredicted RBP21.18■□□□□ 0.98
NELFCD-211ENST00000492016 PLEKHG2Q9H7P9 1386 aa21.18■□□□□ 0.98
NELFCD-211ENST00000492016 BARGINQ6ZT62 677 aa21.17■□□□□ 0.98
NELFCD-211ENST00000492016 RGS17Q9UGC6 210 aaPredicted RBP21.17■□□□□ 0.98
NELFCD-211ENST00000492016 CDCA7Q9BWT1 371 aaPredicted RBP21.16■□□□□ 0.98
NELFCD-211ENST00000492016 CCDC9Q9Y3X0 531 aaKnown RBP21.16■□□□□ 0.98
NELFCD-211ENST00000492016 KDRP35968 1356 aa21.15■□□□□ 0.98
NELFCD-211ENST00000492016 MRS2Q9HD23 443 aa21.15■□□□□ 0.98
NELFCD-211ENST00000492016 RBM6P78332 1123 aaKnown RBP21.14■□□□□ 0.97
NELFCD-211ENST00000492016 RGPD1P0DJD0 1748 aa21.14■□□□□ 0.97
NELFCD-211ENST00000492016 ONECUT3O60422 494 aaPredicted RBP21.13■□□□□ 0.97
NELFCD-211ENST00000492016 MIER1Q8N108 512 aa21.13■□□□□ 0.97
NELFCD-211ENST00000492016 U2SURPO15042 1029 aaKnown RBP21.12■□□□□ 0.97
NELFCD-211ENST00000492016 FCHSD2O94868 740 aa21.11■□□□□ 0.97
NELFCD-211ENST00000492016 U2AF1L5P0DN76 240 aaPredicted RBP21.11■□□□□ 0.97
NELFCD-211ENST00000492016 IL2RBP14784 551 aa21.11■□□□□ 0.97
NELFCD-211ENST00000492016 U2AF1Q01081 240 aaKnown RBP eCLIP21.11■□□□□ 0.97
NELFCD-211ENST00000492016 WDR43Q15061 677 aaKnown RBP eCLIP21.11■□□□□ 0.97
NELFCD-211ENST00000492016 CCDC184Q52MB2 194 aa21.11■□□□□ 0.97
NELFCD-211ENST00000492016 USP35Q9P2H5 1018 aa21.11■□□□□ 0.97
NELFCD-211ENST00000492016 DISP2A7MBM2 1401 aa21.11■□□□□ 0.97
NELFCD-211ENST00000492016 RXRBP28702 533 aa21.1■□□□□ 0.97
NELFCD-211ENST00000492016 SULT6B1Q6IMI4 303 aa21.1■□□□□ 0.97
NELFCD-211ENST00000492016 RAPGEF4Q8WZA2 1011 aa21.1■□□□□ 0.97
NELFCD-211ENST00000492016 PNNQ9H307 717 aaKnown RBP21.1■□□□□ 0.97
NELFCD-211ENST00000492016 GLI3P10071 1580 aa21.1■□□□□ 0.97
NELFCD-211ENST00000492016 POTEAQ6S8J7 498 aa21.09■□□□□ 0.97
NELFCD-211ENST00000492016 USHBP1Q8N6Y0 703 aa21.09■□□□□ 0.97
NELFCD-211ENST00000492016 PNISRQ8TF01 805 aaKnown RBP21.09■□□□□ 0.97
NELFCD-211ENST00000492016 TATP17735 454 aaPredicted RBP21.07■□□□□ 0.96
NELFCD-211ENST00000492016 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.07■□□□□ 0.964e-7■□□□□ 10.5
NELFCD-211ENST00000492016 FAM98CQ17RN3 349 aaKnown RBP21.06■□□□□ 0.96
NELFCD-211ENST00000492016 AEBP1Q8IUX7 1158 aa21.06■□□□□ 0.96
NELFCD-211ENST00000492016 RSPH6AQ9H0K4 717 aa21.06■□□□□ 0.96
NELFCD-211ENST00000492016 RGPD2P0DJD1 1756 aa21.05■□□□□ 0.96
NELFCD-211ENST00000492016 OVOS2A0A0G2JMS6 1433 aa21.05■□□□□ 0.96
NELFCD-211ENST00000492016 HMOX1P09601 288 aa21.05■□□□□ 0.96
NELFCD-211ENST00000492016 AMOTQ4VCS5 1084 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms