RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 KIAA0232Q92628 1395 aa29.17■■■□□ 2.26
VCPKMT-204ENST00000491402 ARHGEF25Q86VW2 580 aa29.17■■■□□ 2.26
VCPKMT-204ENST00000491402 FAM83GA6ND36 823 aa29.16■■■□□ 2.26
VCPKMT-204ENST00000491402 PRDM11Q9NQV5 511 aa29.16■■■□□ 2.26
VCPKMT-204ENST00000491402 AMPHP49418 695 aa29.16■■■□□ 2.26
VCPKMT-204ENST00000491402 PNISRQ8TF01 805 aaKnown RBP29.16■■■□□ 2.26
VCPKMT-204ENST00000491402 NGLY1Q96IV0 654 aa29.16■■■□□ 2.26
VCPKMT-204ENST00000491402 RTL1A6NKG5 1358 aa29.15■■■□□ 2.26
VCPKMT-204ENST00000491402 CHRNA2Q15822 529 aa29.15■■■□□ 2.26
VCPKMT-204ENST00000491402 CPDO75976 1380 aa29.13■■■□□ 2.25
VCPKMT-204ENST00000491402 HOXC9P31274 260 aa29.13■■■□□ 2.25
VCPKMT-204ENST00000491402 HSP90AB2PQ58FF8 381 aa29.11■■■□□ 2.25
VCPKMT-204ENST00000491402 DIAPH1O60610 1272 aaKnown RBP29.1■■■□□ 2.25
VCPKMT-204ENST00000491402 FAM9BQ8IZU0 186 aa29.1■■■□□ 2.25
VCPKMT-204ENST00000491402 IP6K1Q92551 441 aa29.1■■■□□ 2.25
VCPKMT-204ENST00000491402 COL18A1P39060 1754 aa29.09■■■□□ 2.25
VCPKMT-204ENST00000491402 RGPD5Q99666 1765 aa29.08■■■□□ 2.25
VCPKMT-204ENST00000491402 ABCC6O95255 1503 aa29.08■■■□□ 2.25
VCPKMT-204ENST00000491402 WDR43Q15061 677 aaKnown RBP eCLIP29.07■■■□□ 2.24
VCPKMT-204ENST00000491402 AFF2P51816 1311 aa29.07■■■□□ 2.24
VCPKMT-204ENST00000491402 BTG4Q9NY30 223 aa29.06■■■□□ 2.24
VCPKMT-204ENST00000491402 BLMP54132 1417 aaPredicted RBP29.06■■■□□ 2.24
VCPKMT-204ENST00000491402 FNBP4Q8N3X1 1017 aaPredicted RBP29.06■■■□□ 2.24
VCPKMT-204ENST00000491402 IL13P35225 146 aa29.05■■■□□ 2.24
VCPKMT-204ENST00000491402 EIF4A2Q14240 407 aaKnown RBP29.05■■■□□ 2.24
VCPKMT-204ENST00000491402 NUDCQ9Y266 331 aa29.04■■■□□ 2.24
VCPKMT-204ENST00000491402 AXIN2Q9Y2T1 843 aa29.04■■■□□ 2.24
VCPKMT-204ENST00000491402 COL14A1Q05707 1796 aaKnown RBP29.04■■■□□ 2.24
VCPKMT-204ENST00000491402 LMO7Q8WWI1 1683 aa29.03■■■□□ 2.24
VCPKMT-204ENST00000491402 PHF23Q9BUL5 403 aaPredicted RBP29.03■■■□□ 2.24
VCPKMT-204ENST00000491402 USP21Q9UK80 565 aa29.03■■■□□ 2.24
VCPKMT-204ENST00000491402 ADAMTS8Q9UP79 889 aa29.02■■■□□ 2.24
VCPKMT-204ENST00000491402 SLIT2O94813 1529 aa29.01■■■□□ 2.24
VCPKMT-204ENST00000491402 RGPD1P0DJD0 1748 aa29.01■■■□□ 2.23
VCPKMT-204ENST00000491402 U2SURPO15042 1029 aaKnown RBP29.01■■■□□ 2.23
VCPKMT-204ENST00000491402 PLCH1Q4KWH8 1693 aa29■■■□□ 2.23
VCPKMT-204ENST00000491402 CAMTA1Q9Y6Y1 1673 aa29■■■□□ 2.23
VCPKMT-204ENST00000491402 BCL9LQ86UU0 1499 aa28.99■■■□□ 2.23
VCPKMT-204ENST00000491402 U2AF1L5P0DN76 240 aaPredicted RBP28.98■■■□□ 2.23
VCPKMT-204ENST00000491402 U2AF1Q01081 240 aaKnown RBP eCLIP28.98■■■□□ 2.23
VCPKMT-204ENST00000491402 UNC5CLQ8IV45 518 aa28.98■■■□□ 2.23
VCPKMT-204ENST00000491402 LTV1Q96GA3 475 aaPredicted RBP28.98■■■□□ 2.23
VCPKMT-204ENST00000491402 STRN4Q9NRL3 753 aa28.98■■■□□ 2.23
VCPKMT-204ENST00000491402 RGS17Q9UGC6 210 aaPredicted RBP28.98■■■□□ 2.23
VCPKMT-204ENST00000491402 EVA1CP58658 441 aa28.97■■■□□ 2.23
VCPKMT-204ENST00000491402 ERBB3P21860 1342 aa28.95■■■□□ 2.23
VCPKMT-204ENST00000491402 RGPD2P0DJD1 1756 aa28.95■■■□□ 2.23
VCPKMT-204ENST00000491402 ZNF772Q68DY9 489 aaPredicted RBP28.95■■■□□ 2.22
VCPKMT-204ENST00000491402 ANKRD24Q8TF21 1146 aa28.95■■■□□ 2.22
VCPKMT-204ENST00000491402 NWD2Q9ULI1 1742 aa28.94■■■□□ 2.22
VCPKMT-204ENST00000491402 QTRT2Q9H974 415 aaKnown RBP28.93■■■□□ 2.22
VCPKMT-204ENST00000491402 FAM208AQ9UK61 1670 aaKnown RBP28.92■■■□□ 2.22
VCPKMT-204ENST00000491402 COL5A2P05997 1499 aaPredicted RBP28.92■■■□□ 2.22
VCPKMT-204ENST00000491402 IGSF1Q8N6C5 1336 aa28.91■■■□□ 2.22
VCPKMT-204ENST00000491402 EYA1Q99502 592 aa28.91■■■□□ 2.22
VCPKMT-204ENST00000491402 NRAPQ86VF7 1730 aa28.9■■■□□ 2.22
VCPKMT-204ENST00000491402 LARP1Q6PKG0 1096 aaKnown RBP28.9■■■□□ 2.22
VCPKMT-204ENST00000491402 HMOX1P09601 288 aa28.89■■■□□ 2.22
VCPKMT-204ENST00000491402 CSB-PGBD3P0DP91 1061 aa28.89■■■□□ 2.22
VCPKMT-204ENST00000491402 TRPC5Q9UL62 973 aaPredicted RBP28.89■■■□□ 2.22
VCPKMT-204ENST00000491402 CCDC9Q9Y3X0 531 aaKnown RBP28.89■■■□□ 2.22
VCPKMT-204ENST00000491402 YTHDC1Q96MU7 727 aaKnown RBP28.88■■■□□ 2.21
VCPKMT-204ENST00000491402 VPS72Q15906 364 aa28.88■■■□□ 2.21
VCPKMT-204ENST00000491402 FCHSD2O94868 740 aa28.87■■■□□ 2.21
VCPKMT-204ENST00000491402 NBPF6Q5VWK0 638 aa28.87■■■□□ 2.21
VCPKMT-204ENST00000491402 SULT6B1Q6IMI4 303 aa28.87■■■□□ 2.21
VCPKMT-204ENST00000491402 POTEAQ6S8J7 498 aa28.87■■■□□ 2.21
VCPKMT-204ENST00000491402 CCDC146Q8IYE0 955 aa28.87■■■□□ 2.21
VCPKMT-204ENST00000491402 NBPF4Q96M43 638 aa28.87■■■□□ 2.21
VCPKMT-204ENST00000491402 RSPH6AQ9H0K4 717 aa28.87■■■□□ 2.21
VCPKMT-204ENST00000491402 KDRP35968 1356 aa28.87■■■□□ 2.21
VCPKMT-204ENST00000491402 AEBP1Q8IUX7 1158 aa28.86■■■□□ 2.21
VCPKMT-204ENST00000491402 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.86■■■□□ 2.21
VCPKMT-204ENST00000491402 WDR17Q8IZU2 1322 aa28.86■■■□□ 2.21
VCPKMT-204ENST00000491402 TOM1L2Q6ZVM7 507 aa28.85■■■□□ 2.21
VCPKMT-204ENST00000491402 USP35Q9P2H5 1018 aa28.85■■■□□ 2.21
VCPKMT-204ENST00000491402 ATRNO75882 1429 aa28.84■■■□□ 2.21
VCPKMT-204ENST00000491402 NCAPD2Q15021 1401 aa28.84■■■□□ 2.21
VCPKMT-204ENST00000491402 PLEKHF1Q96S99 279 aa28.83■■■□□ 2.21
VCPKMT-204ENST00000491402 PRKAR2BP31323 418 aa28.83■■■□□ 2.21
VCPKMT-204ENST00000491402 USHBP1Q8N6Y0 703 aa28.83■■■□□ 2.21
VCPKMT-204ENST00000491402 RUNDC1Q96C34 613 aa28.83■■■□□ 2.21
VCPKMT-204ENST00000491402 GJD4Q96KN9 370 aaPredicted RBP28.83■■■□□ 2.21
VCPKMT-204ENST00000491402 NLRP2Q9NX02 1062 aa28.83■■■□□ 2.21
VCPKMT-204ENST00000491402 PNNQ9H307 717 aaKnown RBP28.82■■■□□ 2.2
VCPKMT-204ENST00000491402 SPATA31A5Q5VU36 1347 aa28.82■■■□□ 2.2
VCPKMT-204ENST00000491402 SPATA31A7Q8IWB4 1347 aa28.82■■■□□ 2.2
VCPKMT-204ENST00000491402 HNRNPUQ00839 825 aaKnown RBP eCLIP28.81■■■□□ 2.2
VCPKMT-204ENST00000491402 CRB1P82279 1406 aa28.8■■■□□ 2.2
VCPKMT-204ENST00000491402 SPATA31A1Q5TZJ5 1347 aa28.79■■■□□ 2.2
VCPKMT-204ENST00000491402 CARD10Q9BWT7 1032 aa28.78■■■□□ 2.2
VCPKMT-204ENST00000491402 SENP3-EIF4A1A0A087X0R7 540 aa28.77■■■□□ 2.2
VCPKMT-204ENST00000491402 RXRBP28702 533 aa28.77■■■□□ 2.2
VCPKMT-204ENST00000491402 RBM6P78332 1123 aaKnown RBP28.77■■■□□ 2.2
VCPKMT-204ENST00000491402 MAPK8IP3Q9UPT6 1336 aa28.77■■■□□ 2.2
VCPKMT-204ENST00000491402 APAF1O14727 1248 aa28.75■■■□□ 2.19
VCPKMT-204ENST00000491402 NEFMP07197 916 aa28.75■■■□□ 2.19
VCPKMT-204ENST00000491402 GLI3P10071 1580 aa28.74■■■□□ 2.19
VCPKMT-204ENST00000491402 TCP11L2Q8N4U5 519 aa28.74■■■□□ 2.19
VCPKMT-204ENST00000491402 PHACTR3Q96KR7 559 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms