RNA–Protein interactions for RNA: ENST00000491215.1

NOTCH4-205, Transcript of notch 4, humanhuman

TSL 3

Gene NOTCH4, Length 1,632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-205ENST00000491215 RGPD5Q99666 1765 aa29.39■■■□□ 2.29
NOTCH4-205ENST00000491215 FLT4P35916 1363 aa29.39■■■□□ 2.29
NOTCH4-205ENST00000491215 PPP2R1AP30153 589 aa29.38■■■□□ 2.29
NOTCH4-205ENST00000491215 HOXC9P31274 260 aa29.38■■■□□ 2.29
NOTCH4-205ENST00000491215 DIEXFQ68CQ4 756 aaKnown RBP29.38■■■□□ 2.29
NOTCH4-205ENST00000491215 AXIN2Q9Y2T1 843 aa29.38■■■□□ 2.29
NOTCH4-205ENST00000491215 SMG6Q86US8 1419 aaKnown RBP29.38■■■□□ 2.29
NOTCH4-205ENST00000491215 KIF24Q5T7B8 1368 aa29.38■■■□□ 2.29
NOTCH4-205ENST00000491215 IP6K1Q92551 441 aa29.38■■■□□ 2.29
NOTCH4-205ENST00000491215 NWD2Q9ULI1 1742 aa29.37■■■□□ 2.29
NOTCH4-205ENST00000491215 CAMTA1Q9Y6Y1 1673 aa29.37■■■□□ 2.29
NOTCH4-205ENST00000491215 AFF2P51816 1311 aa29.37■■■□□ 2.29
NOTCH4-205ENST00000491215 SLIT2O94813 1529 aa29.37■■■□□ 2.29
NOTCH4-205ENST00000491215 MTHFSP49914 203 aa29.37■■■□□ 2.29
NOTCH4-205ENST00000491215 FNBP4Q8N3X1 1017 aaPredicted RBP29.35■■■□□ 2.29
NOTCH4-205ENST00000491215 BLMP54132 1417 aaPredicted RBP29.35■■■□□ 2.29
NOTCH4-205ENST00000491215 CDK12Q9NYV4 1490 aaPredicted RBP29.34■■■□□ 2.29
NOTCH4-205ENST00000491215 MYBBP1AQ9BQG0 1328 aaKnown RBP29.34■■■□□ 2.29
NOTCH4-205ENST00000491215 EVA1CP58658 441 aa29.34■■■□□ 2.29
NOTCH4-205ENST00000491215 HSP90AB2PQ58FF8 381 aa29.34■■■□□ 2.29
NOTCH4-205ENST00000491215 STRN4Q9NRL3 753 aa29.34■■■□□ 2.29
NOTCH4-205ENST00000491215 USP21Q9UK80 565 aa29.34■■■□□ 2.29
NOTCH4-205ENST00000491215 PHF23Q9BUL5 403 aaPredicted RBP29.33■■■□□ 2.29
NOTCH4-205ENST00000491215 COL5A2P05997 1499 aaPredicted RBP29.33■■■□□ 2.29
NOTCH4-205ENST00000491215 NRAPQ86VF7 1730 aa29.32■■■□□ 2.28
NOTCH4-205ENST00000491215 LTV1Q96GA3 475 aaPredicted RBP29.31■■■□□ 2.28
NOTCH4-205ENST00000491215 INSRP06213 1382 aa29.31■■■□□ 2.28
NOTCH4-205ENST00000491215 BCL9LQ86UU0 1499 aa29.31■■■□□ 2.28
NOTCH4-205ENST00000491215 UNC5CLQ8IV45 518 aa29.31■■■□□ 2.28
NOTCH4-205ENST00000491215 CSB-PGBD3P0DP91 1061 aa29.29■■■□□ 2.28
NOTCH4-205ENST00000491215 ANKRD24Q8TF21 1146 aa29.29■■■□□ 2.28
NOTCH4-205ENST00000491215 ERBB3P21860 1342 aa29.29■■■□□ 2.28
NOTCH4-205ENST00000491215 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.29■■■□□ 2.28
NOTCH4-205ENST00000491215 CFAP53Q96M91 514 aa29.27■■■□□ 2.28
NOTCH4-205ENST00000491215 ZNF772Q68DY9 489 aaPredicted RBP29.26■■■□□ 2.27
NOTCH4-205ENST00000491215 WDR17Q8IZU2 1322 aa29.25■■■□□ 2.27
NOTCH4-205ENST00000491215 LARP1Q6PKG0 1096 aaKnown RBP29.24■■■□□ 2.27
NOTCH4-205ENST00000491215 CCDC9Q9Y3X0 531 aaKnown RBP29.24■■■□□ 2.27
NOTCH4-205ENST00000491215 TOM1L2Q6ZVM7 507 aa29.23■■■□□ 2.27
NOTCH4-205ENST00000491215 EIF4A2Q14240 407 aaKnown RBP29.22■■■□□ 2.27
NOTCH4-205ENST00000491215 FAM208AQ9UK61 1670 aaKnown RBP29.22■■■□□ 2.27
NOTCH4-205ENST00000491215 NLRP2Q9NX02 1062 aa29.21■■■□□ 2.27
NOTCH4-205ENST00000491215 TRPC5Q9UL62 973 aaPredicted RBP29.21■■■□□ 2.27
NOTCH4-205ENST00000491215 CRB1P82279 1406 aa29.2■■■□□ 2.27
NOTCH4-205ENST00000491215 VPS72Q15906 364 aa29.2■■■□□ 2.27
NOTCH4-205ENST00000491215 DIAPH1O60610 1272 aaKnown RBP29.2■■■□□ 2.26
NOTCH4-205ENST00000491215 USP35Q9P2H5 1018 aa29.2■■■□□ 2.26
NOTCH4-205ENST00000491215 COL3A1P02461 1466 aaPredicted RBP29.19■■■□□ 2.26
NOTCH4-205ENST00000491215 QTRT2Q9H974 415 aaKnown RBP29.19■■■□□ 2.26
NOTCH4-205ENST00000491215 ATRNO75882 1429 aa29.18■■■□□ 2.26
NOTCH4-205ENST00000491215 RGPD2P0DJD1 1756 aa29.18■■■□□ 2.26
NOTCH4-205ENST00000491215 RGS17Q9UGC6 210 aaPredicted RBP29.17■■■□□ 2.26
NOTCH4-205ENST00000491215 IL13P35225 146 aa29.16■■■□□ 2.26
NOTCH4-205ENST00000491215 SPATA31A5Q5VU36 1347 aa29.15■■■□□ 2.26
NOTCH4-205ENST00000491215 SPATA31A7Q8IWB4 1347 aa29.15■■■□□ 2.26
NOTCH4-205ENST00000491215 NBPF6Q5VWK0 638 aa29.14■■■□□ 2.26
NOTCH4-205ENST00000491215 NBPF4Q96M43 638 aa29.14■■■□□ 2.26
NOTCH4-205ENST00000491215 CARD10Q9BWT7 1032 aa29.14■■■□□ 2.26
NOTCH4-205ENST00000491215 SPATA31A1Q5TZJ5 1347 aa29.14■■■□□ 2.25
NOTCH4-205ENST00000491215 GJD4Q96KN9 370 aaPredicted RBP29.13■■■□□ 2.25
NOTCH4-205ENST00000491215 USHBP1Q8N6Y0 703 aa29.12■■■□□ 2.25
NOTCH4-205ENST00000491215 EYA1Q99502 592 aa29.12■■■□□ 2.25
NOTCH4-205ENST00000491215 U2SURPO15042 1029 aaKnown RBP29.12■■■□□ 2.25
NOTCH4-205ENST00000491215 NUDCQ9Y266 331 aa29.12■■■□□ 2.25
NOTCH4-205ENST00000491215 TCP11L2Q8N4U5 519 aa29.1■■■□□ 2.25
NOTCH4-205ENST00000491215 GLI3P10071 1580 aa29.09■■■□□ 2.25
NOTCH4-205ENST00000491215 RGPD1P0DJD0 1748 aa29.09■■■□□ 2.25
NOTCH4-205ENST00000491215 POTEAQ6S8J7 498 aa29.09■■■□□ 2.25
NOTCH4-205ENST00000491215 MRS2Q9HD23 443 aa29.09■■■□□ 2.25
NOTCH4-205ENST00000491215 IGSF1Q8N6C5 1336 aa29.08■■■□□ 2.25
NOTCH4-205ENST00000491215 CCDC184Q52MB2 194 aa29.08■■■□□ 2.25
NOTCH4-205ENST00000491215 MIER1Q8N108 512 aa29.08■■■□□ 2.25
NOTCH4-205ENST00000491215 THRAP3Q9Y2W1 955 aaKnown RBP29.07■■■□□ 2.24
NOTCH4-205ENST00000491215 RBM6P78332 1123 aaKnown RBP29.06■■■□□ 2.24
NOTCH4-205ENST00000491215 FAM98CQ17RN3 349 aaKnown RBP29.05■■■□□ 2.24
NOTCH4-205ENST00000491215 U2AF1L5P0DN76 240 aaPredicted RBP29.05■■■□□ 2.24
NOTCH4-205ENST00000491215 RXRBP28702 533 aa29.05■■■□□ 2.24
NOTCH4-205ENST00000491215 U2AF1Q01081 240 aaKnown RBP eCLIP29.05■■■□□ 2.24
NOTCH4-205ENST00000491215 A0A0G2JS52 829 aa29.04■■■□□ 2.24
NOTCH4-205ENST00000491215 MYT1Q01538 1121 aa29.04■■■□□ 2.24
NOTCH4-205ENST00000491215 SULT6B1Q6IMI4 303 aa29.04■■■□□ 2.24
NOTCH4-205ENST00000491215 HMOX1P09601 288 aa29.03■■■□□ 2.24
NOTCH4-205ENST00000491215 WNK3Q9BYP7 1800 aa29.03■■■□□ 2.24
NOTCH4-205ENST00000491215 NCAPD2Q15021 1401 aa29.03■■■□□ 2.24
NOTCH4-205ENST00000491215 WDR43Q15061 677 aaKnown RBP eCLIP29.02■■■□□ 2.24
NOTCH4-205ENST00000491215 BARGINQ6ZT62 677 aa29.02■■■□□ 2.24
NOTCH4-205ENST00000491215 AEBP1Q8IUX7 1158 aa29.02■■■□□ 2.24
NOTCH4-205ENST00000491215 RAPGEF4Q8WZA2 1011 aa29.02■■■□□ 2.24
NOTCH4-205ENST00000491215 IL2RBP14784 551 aa29.01■■■□□ 2.23
NOTCH4-205ENST00000491215 KDRP35968 1356 aa28.99■■■□□ 2.23
NOTCH4-205ENST00000491215 CCER2I3L3R5 266 aa28.98■■■□□ 2.23
NOTCH4-205ENST00000491215 MEGF6O75095 1541 aa28.98■■■□□ 2.23
NOTCH4-205ENST00000491215 PARP4Q9UKK3 1724 aaKnown RBP28.98■■■□□ 2.23
NOTCH4-205ENST00000491215 CDCA7Q9BWT1 371 aaPredicted RBP28.98■■■□□ 2.23
NOTCH4-205ENST00000491215 TATP17735 454 aaPredicted RBP28.97■■■□□ 2.23
NOTCH4-205ENST00000491215 DISP2A7MBM2 1401 aa28.97■■■□□ 2.23
NOTCH4-205ENST00000491215 THSD7AQ9UPZ6 1657 aa28.95■■■□□ 2.23
NOTCH4-205ENST00000491215 ONECUT3O60422 494 aaPredicted RBP28.94■■■□□ 2.22
NOTCH4-205ENST00000491215 SEPT12Q8IYM1 358 aa28.94■■■□□ 2.22
NOTCH4-205ENST00000491215 OVOS2A0A0G2JMS6 1433 aa28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms