RNA–Protein interactions for RNA: ENST00000491166.1

TMCO3-208, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 2

Gene TMCO3, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-208ENST00000491166 SLC12A5Q9H2X9 1139 aa17.64■□□□□ 0.41
TMCO3-208ENST00000491166 LMO7Q8WWI1 1683 aa17.64■□□□□ 0.41
TMCO3-208ENST00000491166 CEP350Q5VT06 3117 aa17.63■□□□□ 0.41
TMCO3-208ENST00000491166 SLIT3O75094 1523 aa17.63■□□□□ 0.41
TMCO3-208ENST00000491166 ST20-MTHFSA0A0A6YYL1 179 aa17.63■□□□□ 0.41
TMCO3-208ENST00000491166 AKAP12Q02952 1782 aa17.62■□□□□ 0.41
TMCO3-208ENST00000491166 COL5A2P05997 1499 aaPredicted RBP17.62■□□□□ 0.41
TMCO3-208ENST00000491166 NME9Q86XW9 330 aa17.61■□□□□ 0.41
TMCO3-208ENST00000491166 TESK2Q96S53 571 aa17.61■□□□□ 0.41
TMCO3-208ENST00000491166 CD163L1Q9NR16 1453 aa17.61■□□□□ 0.41
TMCO3-208ENST00000491166 TCP11L2Q8N4U5 519 aa17.6■□□□□ 0.41
TMCO3-208ENST00000491166 TTC21AQ8NDW8 1320 aa17.6■□□□□ 0.41
TMCO3-208ENST00000491166 MYOM1P52179 1685 aa17.59■□□□□ 0.41
TMCO3-208ENST00000491166 AATKQ6ZMQ8 1374 aa17.59■□□□□ 0.41
TMCO3-208ENST00000491166 AXIN2Q9Y2T1 843 aa17.59■□□□□ 0.41
TMCO3-208ENST00000491166 CHD4Q14839 1912 aa17.59■□□□□ 0.41
TMCO3-208ENST00000491166 ZBTB7AO95365 584 aa17.58■□□□□ 0.4
TMCO3-208ENST00000491166 BARGINQ6ZT62 677 aa17.58■□□□□ 0.4
TMCO3-208ENST00000491166 HDGFL2Q7Z4V5 671 aaPredicted RBP17.58■□□□□ 0.4
TMCO3-208ENST00000491166 PDGFDQ9GZP0 370 aaPredicted RBP17.58■□□□□ 0.4
TMCO3-208ENST00000491166 PDE3BQ13370 1112 aa17.57■□□□□ 0.4
TMCO3-208ENST00000491166 ARHGEF25Q86VW2 580 aa17.57■□□□□ 0.4
TMCO3-208ENST00000491166 MON2Q7Z3U7 1717 aa17.57■□□□□ 0.4
TMCO3-208ENST00000491166 A0A1W2PP64 1363 aa17.56■□□□□ 0.4
TMCO3-208ENST00000491166 USP47Q96K76 1375 aa17.56■□□□□ 0.4
TMCO3-208ENST00000491166 GIGYF1O75420 1035 aaPredicted RBP17.56■□□□□ 0.4
TMCO3-208ENST00000491166 TOM1L2Q6ZVM7 507 aa17.56■□□□□ 0.4
TMCO3-208ENST00000491166 KCNH5Q8NCM2 988 aa17.56■□□□□ 0.4
TMCO3-208ENST00000491166 ANO8Q9HCE9 1232 aaPredicted RBP17.56■□□□□ 0.4
TMCO3-208ENST00000491166 CRB1P82279 1406 aa17.55■□□□□ 0.4
TMCO3-208ENST00000491166 ATF5Q9Y2D1 282 aaPredicted RBP17.55■□□□□ 0.4
TMCO3-208ENST00000491166 NFAT5O94916 1531 aa17.54■□□□□ 0.4
TMCO3-208ENST00000491166 CSB-PGBD3P0DP91 1061 aa17.54■□□□□ 0.4
TMCO3-208ENST00000491166 TERF2IPQ9NYB0 399 aa17.54■□□□□ 0.4
TMCO3-208ENST00000491166 COL18A1P39060 1754 aa17.53■□□□□ 0.4
TMCO3-208ENST00000491166 CASZ1Q86V15 1759 aa17.53■□□□□ 0.4
TMCO3-208ENST00000491166 FHDC1Q9C0D6 1143 aaPredicted RBP17.53■□□□□ 0.4
TMCO3-208ENST00000491166 THRAP3Q9Y2W1 955 aaKnown RBP17.53■□□□□ 0.4
TMCO3-208ENST00000491166 WDR17Q8IZU2 1322 aa17.52■□□□□ 0.4
TMCO3-208ENST00000491166 SYT17Q9BSW7 474 aa17.52■□□□□ 0.4
TMCO3-208ENST00000491166 EDC4Q6P2E9 1401 aaKnown RBP17.52■□□□□ 0.4
TMCO3-208ENST00000491166 USP31Q70CQ4 1352 aa17.52■□□□□ 0.39
TMCO3-208ENST00000491166 PTGER2P43116 358 aa17.51■□□□□ 0.39
TMCO3-208ENST00000491166 PUS7Q96PZ0 661 aaKnown RBP17.5■□□□□ 0.39
TMCO3-208ENST00000491166 RGPD5Q99666 1765 aa17.49■□□□□ 0.39
TMCO3-208ENST00000491166 TMF1P82094 1093 aa17.48■□□□□ 0.39
TMCO3-208ENST00000491166 OVOS2A0A0J9YW53 1432 aa17.47■□□□□ 0.39
TMCO3-208ENST00000491166 OVOS2Q6IE36 1432 aa17.47■□□□□ 0.39
TMCO3-208ENST00000491166 FBLN1P23142 703 aa17.47■□□□□ 0.39
TMCO3-208ENST00000491166 DDB1Q16531 1140 aa17.47■□□□□ 0.39
TMCO3-208ENST00000491166 CCER1Q8TC90 406 aaPredicted RBP17.47■□□□□ 0.39
TMCO3-208ENST00000491166 BCL11BQ9C0K0 894 aaPredicted RBP17.47■□□□□ 0.39
TMCO3-208ENST00000491166 LRRC37A3O60309 1634 aa17.47■□□□□ 0.39
TMCO3-208ENST00000491166 CARD10Q9BWT7 1032 aa17.46■□□□□ 0.39
TMCO3-208ENST00000491166 PARP4Q9UKK3 1724 aaKnown RBP17.46■□□□□ 0.39
TMCO3-208ENST00000491166 CLSPNQ9HAW4 1339 aa17.46■□□□□ 0.38
TMCO3-208ENST00000491166 USP54Q70EL1 1684 aa17.45■□□□□ 0.38
TMCO3-208ENST00000491166 ANKRD36BQ8N2N9 1353 aa17.44■□□□□ 0.38
TMCO3-208ENST00000491166 NLRP2Q9NX02 1062 aa17.44■□□□□ 0.38
TMCO3-208ENST00000491166 ERBB3P21860 1342 aa17.44■□□□□ 0.38
TMCO3-208ENST00000491166 SLC24A1O60721 1099 aa17.43■□□□□ 0.38
TMCO3-208ENST00000491166 PTF1AQ7RTS3 328 aa17.43■□□□□ 0.38
TMCO3-208ENST00000491166 MARCH10Q8NA82 808 aaPredicted RBP17.43■□□□□ 0.38
TMCO3-208ENST00000491166 ANKRD24Q8TF21 1146 aa17.43■□□□□ 0.38
TMCO3-208ENST00000491166 LTV1Q96GA3 475 aaPredicted RBP17.43■□□□□ 0.38
TMCO3-208ENST00000491166 COG3Q96JB2 828 aa17.43■□□□□ 0.38
TMCO3-208ENST00000491166 TIMELESSQ9UNS1 1208 aa17.43■□□□□ 0.38
TMCO3-208ENST00000491166 OVOS2A0A0G2JMS6 1433 aa17.42■□□□□ 0.38
TMCO3-208ENST00000491166 GPR162Q16538 588 aa17.42■□□□□ 0.38
TMCO3-208ENST00000491166 GGNBP2Q9H3C7 697 aa17.42■□□□□ 0.38
TMCO3-208ENST00000491166 LTN1O94822 1766 aa17.42■□□□□ 0.38
TMCO3-208ENST00000491166 ABCC6O95255 1503 aa17.41■□□□□ 0.38
TMCO3-208ENST00000491166 CCDC7Q96M83 1385 aa17.4■□□□□ 0.38
TMCO3-208ENST00000491166 WNK3Q9BYP7 1800 aa17.4■□□□□ 0.38
TMCO3-208ENST00000491166 PELP1Q8IZL8 1130 aaKnown RBP17.4■□□□□ 0.38
TMCO3-208ENST00000491166 POLR3GLQ9BT43 218 aa17.4■□□□□ 0.38
TMCO3-208ENST00000491166 MAP3K19Q56UN5 1328 aa17.4■□□□□ 0.38
TMCO3-208ENST00000491166 RGPD3A6NKT7 1758 aaPredicted RBP17.4■□□□□ 0.38
TMCO3-208ENST00000491166 RGPD4Q7Z3J3 1758 aa17.4■□□□□ 0.38
TMCO3-208ENST00000491166 PEAK1Q9H792 1746 aa17.39■□□□□ 0.37
TMCO3-208ENST00000491166 CDCA7Q9BWT1 371 aaPredicted RBP17.39■□□□□ 0.37
TMCO3-208ENST00000491166 EXOC5O00471 708 aa17.38■□□□□ 0.37
TMCO3-208ENST00000491166 FYB1O15117 783 aa17.38■□□□□ 0.37
TMCO3-208ENST00000491166 PLSCR1O15162 318 aa17.38■□□□□ 0.37
TMCO3-208ENST00000491166 RRS1Q15050 365 aaKnown RBP17.38■□□□□ 0.37
TMCO3-208ENST00000491166 CDCA8Q53HL2 280 aa17.38■□□□□ 0.37
TMCO3-208ENST00000491166 PROM2Q8N271 834 aa17.38■□□□□ 0.37
TMCO3-208ENST00000491166 IP6K1Q92551 441 aa17.38■□□□□ 0.37
TMCO3-208ENST00000491166 STK32BQ9NY57 414 aa17.38■□□□□ 0.37
TMCO3-208ENST00000491166 AMPHP49418 695 aa17.37■□□□□ 0.37
TMCO3-208ENST00000491166 KLHL34Q8N239 644 aa17.37■□□□□ 0.37
TMCO3-208ENST00000491166 MTFR1LQ9H019 292 aa17.37■□□□□ 0.37
TMCO3-208ENST00000491166 SHANK3Q9BYB0 1731 aa17.37■□□□□ 0.37
TMCO3-208ENST00000491166 SBF2Q86WG5 1849 aa17.36■□□□□ 0.37
TMCO3-208ENST00000491166 IL2RBP14784 551 aa17.36■□□□□ 0.37
TMCO3-208ENST00000491166 ARXQ96QS3 562 aa17.36■□□□□ 0.37
TMCO3-208ENST00000491166 SGIP1Q9BQI5 828 aa17.36■□□□□ 0.37
TMCO3-208ENST00000491166 CARD14Q9BXL6 1004 aa17.36■□□□□ 0.37
TMCO3-208ENST00000491166 TNS2Q63HR2 1409 aa17.36■□□□□ 0.37
TMCO3-208ENST00000491166 HOXC9P31274 260 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms