RNA–Protein interactions for RNA: ENST00000491142.1

HPS4-215, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-215ENST00000491142 ITSN1Q15811 1721 aa12.29□□□□□ -0.44
HPS4-215ENST00000491142 PLEKHG3A1L390 1219 aa12.29□□□□□ -0.44
HPS4-215ENST00000491142 GCP02774 474 aa12.29□□□□□ -0.44
HPS4-215ENST00000491142 PTF1AQ7RTS3 328 aa12.29□□□□□ -0.44
HPS4-215ENST00000491142 ANO8Q9HCE9 1232 aaPredicted RBP12.29□□□□□ -0.44
HPS4-215ENST00000491142 USP19O94966 1318 aa12.29□□□□□ -0.44
HPS4-215ENST00000491142 LMO7Q8WWI1 1683 aa12.29□□□□□ -0.44
HPS4-215ENST00000491142 PLSCR1O15162 318 aa12.28□□□□□ -0.44
HPS4-215ENST00000491142 ZBTB7CA1YPR0 619 aa12.27□□□□□ -0.45
HPS4-215ENST00000491142 NLRP13Q86W25 1043 aa12.27□□□□□ -0.45
HPS4-215ENST00000491142 PROM2Q8N271 834 aa12.27□□□□□ -0.45
HPS4-215ENST00000491142 ARHGEF28Q8N1W1 1705 aaKnown RBP12.27□□□□□ -0.45
HPS4-215ENST00000491142 COL5A2P05997 1499 aaPredicted RBP12.27□□□□□ -0.45
HPS4-215ENST00000491142 C11orf95C9JLR9 678 aaPredicted RBP12.26□□□□□ -0.45
HPS4-215ENST00000491142 ZBTB7AO95365 584 aa12.26□□□□□ -0.45
HPS4-215ENST00000491142 STAC3Q96MF2 364 aa12.26□□□□□ -0.45
HPS4-215ENST00000491142 OVOS2A0A0G2JMS6 1433 aa12.26□□□□□ -0.45
HPS4-215ENST00000491142 OVOS2A0A0J9YW53 1432 aa12.26□□□□□ -0.45
HPS4-215ENST00000491142 OVOS2Q6IE36 1432 aa12.26□□□□□ -0.45
HPS4-215ENST00000491142 PARP4Q9UKK3 1724 aaKnown RBP12.25□□□□□ -0.45
HPS4-215ENST00000491142 PTGER2P43116 358 aa12.25□□□□□ -0.45
HPS4-215ENST00000491142 DDB1Q16531 1140 aa12.25□□□□□ -0.45
HPS4-215ENST00000491142 ZNF784Q8NCA9 323 aaPredicted RBP12.25□□□□□ -0.45
HPS4-215ENST00000491142 BCL11BQ9C0K0 894 aaPredicted RBP12.25□□□□□ -0.45
HPS4-215ENST00000491142 TIMELESSQ9UNS1 1208 aa12.25□□□□□ -0.45
HPS4-215ENST00000491142 CRB1P82279 1406 aa12.25□□□□□ -0.45
HPS4-215ENST00000491142 TOPAZ1Q8N9V7 1692 aa12.25□□□□□ -0.45
HPS4-215ENST00000491142 PEAK1Q9H792 1746 aa12.25□□□□□ -0.45
HPS4-215ENST00000491142 CASZ1Q86V15 1759 aa12.23□□□□□ -0.45
HPS4-215ENST00000491142 TOM1L2Q6ZVM7 507 aa12.23□□□□□ -0.45
HPS4-215ENST00000491142 MARCH10Q8NA82 808 aaPredicted RBP12.23□□□□□ -0.45
HPS4-215ENST00000491142 PPIP5K1Q6PFW1 1433 aa12.22□□□□□ -0.45
HPS4-215ENST00000491142 NLRP6P59044 892 aa12.22□□□□□ -0.45
HPS4-215ENST00000491142 SRPK2P78362 688 aaKnown RBP12.22□□□□□ -0.45
HPS4-215ENST00000491142 CABP2Q9NPB3 220 aa12.22□□□□□ -0.45
HPS4-215ENST00000491142 AXIN2Q9Y2T1 843 aa12.22□□□□□ -0.45
HPS4-215ENST00000491142 SBF2Q86WG5 1849 aa12.22□□□□□ -0.45
HPS4-215ENST00000491142 AATKQ6ZMQ8 1374 aa12.21□□□□□ -0.45
HPS4-215ENST00000491142 NBPF1Q3BBV0 1214 aa12.21□□□□□ -0.45
HPS4-215ENST00000491142 SYT17Q9BSW7 474 aa12.21□□□□□ -0.45
HPS4-215ENST00000491142 FHDC1Q9C0D6 1143 aaPredicted RBP12.21□□□□□ -0.45
HPS4-215ENST00000491142 LRRC37A3O60309 1634 aa12.21□□□□□ -0.46
HPS4-215ENST00000491142 RGPD3A6NKT7 1758 aaPredicted RBP12.2□□□□□ -0.46
HPS4-215ENST00000491142 RGPD4Q7Z3J3 1758 aa12.2□□□□□ -0.46
HPS4-215ENST00000491142 MYOM1P52179 1685 aa12.2□□□□□ -0.46
HPS4-215ENST00000491142 TXNRD1Q16881 649 aa12.2□□□□□ -0.46
HPS4-215ENST00000491142 SLC15A2Q16348 729 aa12.19□□□□□ -0.46
HPS4-215ENST00000491142 STK32BQ9NY57 414 aa12.19□□□□□ -0.46
HPS4-215ENST00000491142 CABP1Q9NZU7 370 aa12.19□□□□□ -0.46
HPS4-215ENST00000491142 WDR17Q8IZU2 1322 aa12.18□□□□□ -0.46
HPS4-215ENST00000491142 SENP3-EIF4A1A0A087X0R7 540 aa12.18□□□□□ -0.46
HPS4-215ENST00000491142 BCL9O00512 1426 aa12.18□□□□□ -0.46
HPS4-215ENST00000491142 BRD4O60885 1362 aaPredicted RBP12.18□□□□□ -0.46
HPS4-215ENST00000491142 GOLGB1Q14789 3259 aaKnown RBP12.17□□□□□ -0.46
HPS4-215ENST00000491142 SLIT3O75094 1523 aa12.17□□□□□ -0.46
HPS4-215ENST00000491142 SGIP1Q9BQI5 828 aa12.17□□□□□ -0.46
HPS4-215ENST00000491142 CDCA7Q9BWT1 371 aaPredicted RBP12.17□□□□□ -0.46
HPS4-215ENST00000491142 MTFR1LQ9H019 292 aa12.17□□□□□ -0.46
HPS4-215ENST00000491142 USP6P35125 1406 aa12.17□□□□□ -0.46
HPS4-215ENST00000491142 COL18A1P39060 1754 aa12.17□□□□□ -0.46
HPS4-215ENST00000491142 CENPJQ9HC77 1338 aaPredicted RBP12.16□□□□□ -0.46
HPS4-215ENST00000491142 C1QTNF8P60827 252 aa12.16□□□□□ -0.46
HPS4-215ENST00000491142 POTEHQ6S545 545 aa12.16□□□□□ -0.46
HPS4-215ENST00000491142 ARHGEF25Q86VW2 580 aa12.16□□□□□ -0.46
HPS4-215ENST00000491142 EXOC5O00471 708 aa12.15□□□□□ -0.46
HPS4-215ENST00000491142 SOX12O15370 315 aa12.15□□□□□ -0.46
HPS4-215ENST00000491142 CSB-PGBD3P0DP91 1061 aa12.15□□□□□ -0.46
HPS4-215ENST00000491142 MKRN4PQ13434 485 aaPredicted RBP12.15□□□□□ -0.46
HPS4-215ENST00000491142 AKT1S1Q96B36 256 aa12.15□□□□□ -0.46
HPS4-215ENST00000491142 CARD10Q9BWT7 1032 aa12.15□□□□□ -0.46
HPS4-215ENST00000491142 CPSF1Q10570 1443 aaKnown RBP12.13□□□□□ -0.47
HPS4-215ENST00000491142 ACSBG1Q96GR2 724 aa12.13□□□□□ -0.47
HPS4-215ENST00000491142 ARXQ96QS3 562 aa12.13□□□□□ -0.47
HPS4-215ENST00000491142 KIAA1210Q9ULL0 1709 aa12.13□□□□□ -0.47
HPS4-215ENST00000491142 WNK3Q9BYP7 1800 aa12.13□□□□□ -0.47
HPS4-215ENST00000491142 PIK3C2AO00443 1686 aa12.13□□□□□ -0.47
HPS4-215ENST00000491142 CEP350Q5VT06 3117 aa12.13□□□□□ -0.47
HPS4-215ENST00000491142 AKAP12Q02952 1782 aa12.13□□□□□ -0.47
HPS4-215ENST00000491142 KCNH5Q8NCM2 988 aa12.12□□□□□ -0.47
HPS4-215ENST00000491142 SIN3AQ96ST3 1273 aa12.12□□□□□ -0.47
HPS4-215ENST00000491142 TTC21BQ7Z4L5 1316 aa12.11□□□□□ -0.47
HPS4-215ENST00000491142 RGPD5Q99666 1765 aa12.11□□□□□ -0.47
HPS4-215ENST00000491142 GPR162Q16538 588 aa12.1□□□□□ -0.47
HPS4-215ENST00000491142 ZNF827Q17R98 1081 aa12.1□□□□□ -0.47
HPS4-215ENST00000491142 TNS2Q63HR2 1409 aa12.1□□□□□ -0.47
HPS4-215ENST00000491142 CHD4Q14839 1912 aa12.09□□□□□ -0.47
HPS4-215ENST00000491142 CCDC7Q96M83 1385 aa12.09□□□□□ -0.47
HPS4-215ENST00000491142 ZNF692Q9BU19 519 aaPredicted RBP12.09□□□□□ -0.47
HPS4-215ENST00000491142 LRRC4BQ9NT99 713 aa12.09□□□□□ -0.47
HPS4-215ENST00000491142 QRICH2Q9H0J4 1663 aa12.09□□□□□ -0.47
HPS4-215ENST00000491142 MAP3K5Q99683 1374 aa12.08□□□□□ -0.48
HPS4-215ENST00000491142 EVC2Q86UK5 1308 aa12.08□□□□□ -0.48
HPS4-215ENST00000491142 TONSLQ96HA7 1378 aa12.07□□□□□ -0.48
HPS4-215ENST00000491142 NEUROD1Q13562 356 aa12.07□□□□□ -0.48
HPS4-215ENST00000491142 IFFO2Q5TF58 517 aa12.07□□□□□ -0.48
HPS4-215ENST00000491142 KLHL34Q8N239 644 aa12.07□□□□□ -0.48
HPS4-215ENST00000491142 PAPPAQ13219 1627 aa12.07□□□□□ -0.48
HPS4-215ENST00000491142 TRPM1Q7Z4N2 1603 aa12.07□□□□□ -0.48
HPS4-215ENST00000491142 TTC21AQ8NDW8 1320 aa12.07□□□□□ -0.48
HPS4-215ENST00000491142 NHSQ6T4R5 1651 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms