RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 SETQ01105 290 aaPredicted RBP13.48□□□□□ -0.25
CRNKL1-204ENST00000490910 PAXBP1Q9Y5B6 917 aa13.48□□□□□ -0.25
CRNKL1-204ENST00000490910 GCC2Q8IWJ2 1684 aa13.48□□□□□ -0.25
CRNKL1-204ENST00000490910 CCDC73Q6ZRK6 1079 aa13.47□□□□□ -0.25
CRNKL1-204ENST00000490910 COL17A1Q9UMD9 1497 aaPredicted RBP13.47□□□□□ -0.25
CRNKL1-204ENST00000490910 TOPBP1Q92547 1522 aa13.47□□□□□ -0.25
CRNKL1-204ENST00000490910 NSD3Q9BZ95 1437 aa13.47□□□□□ -0.25
CRNKL1-204ENST00000490910 HMOX1P09601 288 aa13.47□□□□□ -0.25
CRNKL1-204ENST00000490910 LEKR1Q6ZMV7 388 aa13.47□□□□□ -0.25
CRNKL1-204ENST00000490910 BCL2L12Q9HB09 334 aa13.47□□□□□ -0.25
CRNKL1-204ENST00000490910 PDCP20941 246 aa13.47□□□□□ -0.25
CRNKL1-204ENST00000490910 KIF18AQ8NI77 898 aa13.47□□□□□ -0.25
CRNKL1-204ENST00000490910 CHMP4AQ9BY43 222 aa13.47□□□□□ -0.25
CRNKL1-204ENST00000490910 PRKAR2BP31323 418 aa13.46□□□□□ -0.25
CRNKL1-204ENST00000490910 FILIP1Q7Z7B0 1213 aa13.46□□□□□ -0.25
CRNKL1-204ENST00000490910 TMX3Q96JJ7 454 aa13.46□□□□□ -0.25
CRNKL1-204ENST00000490910 ABCA5Q8WWZ7 1642 aa13.46□□□□□ -0.25
CRNKL1-204ENST00000490910 GTF2F1P35269 517 aaKnown RBP eCLIP13.46□□□□□ -0.25
CRNKL1-204ENST00000490910 GABPB1Q06547 395 aaPredicted RBP13.46□□□□□ -0.25
CRNKL1-204ENST00000490910 FBXW7Q969H0 707 aa13.46□□□□□ -0.25
CRNKL1-204ENST00000490910 NOL10Q9BSC4 688 aaKnown RBP13.46□□□□□ -0.25
CRNKL1-204ENST00000490910 NESP48681 1621 aa13.46□□□□□ -0.25
CRNKL1-204ENST00000490910 ZNF521Q96K83 1311 aa13.46□□□□□ -0.25
CRNKL1-204ENST00000490910 RIOK3O14730 519 aaKnown RBP13.46□□□□□ -0.25
CRNKL1-204ENST00000490910 RPAP2Q8IXW5 612 aaPredicted RBP13.46□□□□□ -0.25
CRNKL1-204ENST00000490910 CC2D2AQ9P2K1 1620 aa13.46□□□□□ -0.26
CRNKL1-204ENST00000490910 KDM5BQ9UGL1 1544 aa13.46□□□□□ -0.26
CRNKL1-204ENST00000490910 PDIA4P13667 645 aaKnown RBP13.46□□□□□ -0.26
CRNKL1-204ENST00000490910 TMEM63CQ9P1W3 806 aa13.46□□□□□ -0.26
CRNKL1-204ENST00000490910 KIF2AO00139 706 aaPredicted RBP13.45□□□□□ -0.26
CRNKL1-204ENST00000490910 HSP90B2PQ58FF3 399 aa13.45□□□□□ -0.26
CRNKL1-204ENST00000490910 TRMT2AQ8IZ69 625 aaKnown RBP13.45□□□□□ -0.26
CRNKL1-204ENST00000490910 C17orf53Q8N3J3 647 aaPredicted RBP13.45□□□□□ -0.26
CRNKL1-204ENST00000490910 TTC22Q5TAA0 569 aa13.45□□□□□ -0.26
CRNKL1-204ENST00000490910 TMCO3Q6UWJ1 677 aa13.45□□□□□ -0.26
CRNKL1-204ENST00000490910 UBXN4Q92575 508 aa13.45□□□□□ -0.26
CRNKL1-204ENST00000490910 NAT10Q9H0A0 1025 aaKnown RBP13.45□□□□□ -0.26
CRNKL1-204ENST00000490910 UBE2HP62256 183 aa13.45□□□□□ -0.26
CRNKL1-204ENST00000490910 ZBTB40Q9NUA8 1239 aa13.45□□□□□ -0.26
CRNKL1-204ENST00000490910 BMS1Q14692 1282 aaKnown RBP13.44□□□□□ -0.26
CRNKL1-204ENST00000490910 ABCC11Q96J66 1382 aa13.44□□□□□ -0.26
CRNKL1-204ENST00000490910 KDM5CP41229 1560 aa13.44□□□□□ -0.26
CRNKL1-204ENST00000490910 MX1P20591 662 aa13.44□□□□□ -0.26
CRNKL1-204ENST00000490910 NUTM2DQ5VT03 806 aaPredicted RBP13.44□□□□□ -0.26
CRNKL1-204ENST00000490910 SOX12O15370 315 aa13.44□□□□□ -0.26
CRNKL1-204ENST00000490910 GGT6Q6P531 493 aa13.44□□□□□ -0.26
CRNKL1-204ENST00000490910 GIMAP6Q6P9H5 292 aa13.44□□□□□ -0.26
CRNKL1-204ENST00000490910 USP48Q86UV5 1035 aa13.44□□□□□ -0.26
CRNKL1-204ENST00000490910 CAMK4Q16566 473 aa13.43□□□□□ -0.26
CRNKL1-204ENST00000490910 CEP135Q66GS9 1140 aa13.43□□□□□ -0.26
CRNKL1-204ENST00000490910 CLIP2Q9UDT6 1046 aa13.43□□□□□ -0.26
CRNKL1-204ENST00000490910 BICRAQ9NZM4 1560 aa13.43□□□□□ -0.26
CRNKL1-204ENST00000490910 CCP110O43303 1012 aa13.42□□□□□ -0.26
CRNKL1-204ENST00000490910 SMARCA5O60264 1052 aaPredicted RBP13.42□□□□□ -0.26
CRNKL1-204ENST00000490910 SMTNL1A8MU46 457 aa13.42□□□□□ -0.26
CRNKL1-204ENST00000490910 POLR3GO15318 223 aaPredicted RBP13.42□□□□□ -0.26
CRNKL1-204ENST00000490910 KDM4AO75164 1064 aa13.42□□□□□ -0.26
CRNKL1-204ENST00000490910 IRX3P78415 501 aaPredicted RBP13.42□□□□□ -0.26
CRNKL1-204ENST00000490910 CCDC186Q7Z3E2 898 aa13.42□□□□□ -0.26
CRNKL1-204ENST00000490910 DNMBPQ6XZF7 1577 aa13.42□□□□□ -0.26
CRNKL1-204ENST00000490910 SDF4Q9BRK5 362 aa13.42□□□□□ -0.26
CRNKL1-204ENST00000490910 POLR3AO14802 1390 aaPredicted RBP13.42□□□□□ -0.26
CRNKL1-204ENST00000490910 LARP1BQ659C4 914 aaKnown RBP13.42□□□□□ -0.26
CRNKL1-204ENST00000490910 ACBD3Q9H3P7 528 aa13.42□□□□□ -0.26
CRNKL1-204ENST00000490910 KINO60870 393 aaKnown RBP13.41□□□□□ -0.26
CRNKL1-204ENST00000490910 SMC2O95347 1197 aa13.41□□□□□ -0.26
CRNKL1-204ENST00000490910 CABP2Q9NPB3 220 aa13.41□□□□□ -0.26
CRNKL1-204ENST00000490910 ZNF397Q8NF99 534 aaPredicted RBP13.41□□□□□ -0.26
CRNKL1-204ENST00000490910 KDM6BO15054 1643 aa13.41□□□□□ -0.26
CRNKL1-204ENST00000490910 TMEM132EQ6IEE7 984 aa13.41□□□□□ -0.26
CRNKL1-204ENST00000490910 DEF6Q9H4E7 631 aa13.41□□□□□ -0.26
CRNKL1-204ENST00000490910 CCDC141Q6ZP82 1450 aa13.4□□□□□ -0.26
CRNKL1-204ENST00000490910 SCAF11Q99590 1463 aaKnown RBP13.4□□□□□ -0.26
CRNKL1-204ENST00000490910 SDSP20132 328 aa13.4□□□□□ -0.26
CRNKL1-204ENST00000490910 SPATA32Q96LK8 384 aa13.4□□□□□ -0.26
CRNKL1-204ENST00000490910 LRRCC1Q9C099 1032 aa13.4□□□□□ -0.26
CRNKL1-204ENST00000490910 TRMT1Q9NXH9 659 aaKnown RBP13.4□□□□□ -0.26
CRNKL1-204ENST00000490910 NEMFO60524 1076 aa13.4□□□□□ -0.26
CRNKL1-204ENST00000490910 FKBP5Q13451 457 aaPredicted RBP13.4□□□□□ -0.26
CRNKL1-204ENST00000490910 CNTROBQ8N137 903 aa13.4□□□□□ -0.26
CRNKL1-204ENST00000490910 USP26Q9BXU7 913 aa13.39□□□□□ -0.27
CRNKL1-204ENST00000490910 TRIM34Q9BYJ4 488 aa13.39□□□□□ -0.27
CRNKL1-204ENST00000490910 CKAP2LQ8IYA6 745 aa13.39□□□□□ -0.27
CRNKL1-204ENST00000490910 STX6O43752 255 aa13.39□□□□□ -0.27
CRNKL1-204ENST00000490910 DHX8Q14562 1220 aaKnown RBP13.39□□□□□ -0.27
CRNKL1-204ENST00000490910 MINK1Q8N4C8 1332 aaPredicted RBP13.39□□□□□ -0.27
CRNKL1-204ENST00000490910 PTGS1P23219 599 aa13.39□□□□□ -0.27
CRNKL1-204ENST00000490910 FAM200AQ8TCP9 573 aa13.39□□□□□ -0.27
CRNKL1-204ENST00000490910 GPT2Q8TD30 523 aa13.39□□□□□ -0.27
CRNKL1-204ENST00000490910 FMNL2Q96PY5 1086 aa13.39□□□□□ -0.27
CRNKL1-204ENST00000490910 CYP46A1Q9Y6A2 500 aa13.39□□□□□ -0.27
CRNKL1-204ENST00000490910 GNAI3P08754 354 aa13.38□□□□□ -0.27
CRNKL1-204ENST00000490910 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.38□□□□□ -0.27
CRNKL1-204ENST00000490910 CNPY2Q9Y2B0 182 aa13.38□□□□□ -0.27
CRNKL1-204ENST00000490910 V9GYY5 206 aaPredicted RBP13.38□□□□□ -0.27
CRNKL1-204ENST00000490910 KIAA0586Q9BVV6 1533 aa13.38□□□□□ -0.27
CRNKL1-204ENST00000490910 BCORL1Q5H9F3 1711 aa13.38□□□□□ -0.27
CRNKL1-204ENST00000490910 GNAI2P04899 355 aa13.38□□□□□ -0.27
CRNKL1-204ENST00000490910 NPM1P06748 294 aaKnown RBP eCLIP13.38□□□□□ -0.27
CRNKL1-204ENST00000490910 FERMT3Q86UX7 667 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms