RNA–Protein interactions for RNA: ENST00000490354.5

RBM39-235, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-235ENST00000490354 PPP1R26Q5T8A7 1209 aaPredicted RBP8.49□□□□□ -1.05
RBM39-235ENST00000490354 LRRN4Q8WUT4 740 aa8.48□□□□□ -1.05
RBM39-235ENST00000490354 ABCC9O60706 1549 aa8.48□□□□□ -1.05
RBM39-235ENST00000490354 FIGNL2A6NMB9 653 aa8.47□□□□□ -1.05
RBM39-235ENST00000490354 TTLL8A6PVC2 850 aa8.47□□□□□ -1.05
RBM39-235ENST00000490354 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.47□□□□□ -1.052e-8■□□□□ 11.2
RBM39-235ENST00000490354 FBXO31Q5XUX0 539 aaPredicted RBP8.47□□□□□ -1.05
RBM39-235ENST00000490354 PDXDC2PQ6P474 469 aa8.47□□□□□ -1.05
RBM39-235ENST00000490354 ARHGAP9Q9BRR9 750 aa8.47□□□□□ -1.05
RBM39-235ENST00000490354 PGPEP1Q9NXJ5 209 aa8.47□□□□□ -1.05
RBM39-235ENST00000490354 PTSQ03393 145 aa8.46□□□□□ -1.06
RBM39-235ENST00000490354 Q6ZVU0 165 aa8.46□□□□□ -1.06
RBM39-235ENST00000490354 GPR161Q8N6U8 529 aaKnown RBP8.46□□□□□ -1.06
RBM39-235ENST00000490354 KCTD15Q96SI1 283 aaPredicted RBP8.46□□□□□ -1.06
RBM39-235ENST00000490354 FKBPLQ9UIM3 349 aa8.46□□□□□ -1.06
RBM39-235ENST00000490354 KRT76Q01546 638 aa8.45□□□□□ -1.06
RBM39-235ENST00000490354 NR6A1Q15406 480 aa8.45□□□□□ -1.06
RBM39-235ENST00000490354 ZBTB33Q86T24 672 aa8.44□□□□□ -1.06
RBM39-235ENST00000490354 SLC10A4Q96EP9 437 aa8.44□□□□□ -1.06
RBM39-235ENST00000490354 DCAF1Q9Y4B6 1507 aa8.44□□□□□ -1.06
RBM39-235ENST00000490354 SPINT1O43278 529 aa8.43□□□□□ -1.06
RBM39-235ENST00000490354 SKIV2LQ15477 1246 aaKnown RBP8.43□□□□□ -1.06
RBM39-235ENST00000490354 CDV3Q9UKY7 258 aaKnown RBP8.43□□□□□ -1.06
RBM39-235ENST00000490354 INTS6LQ5JSJ4 861 aaKnown RBP8.42□□□□□ -1.06
RBM39-235ENST00000490354 PROCA1Q8NCQ7 364 aaPredicted RBP8.42□□□□□ -1.06
RBM39-235ENST00000490354 CNTNAP3BQ96NU0 1288 aa8.42□□□□□ -1.06
RBM39-235ENST00000490354 OCSTAMPQ9BR26 566 aa8.42□□□□□ -1.06
RBM39-235ENST00000490354 CNTNAP3Q9BZ76 1288 aa8.42□□□□□ -1.06
RBM39-235ENST00000490354 ZC3H4Q9UPT8 1303 aaKnown RBP8.41□□□□□ -1.06
RBM39-235ENST00000490354 DHX9Q08211 1270 aaKnown RBP8.41□□□□□ -1.06
RBM39-235ENST00000490354 CCDC155Q8N6L0 562 aa8.41□□□□□ -1.06
RBM39-235ENST00000490354 AGBL1Q96MI9 1066 aa8.41□□□□□ -1.06
RBM39-235ENST00000490354 CTSOP43234 321 aaPredicted RBP8.4□□□□□ -1.06
RBM39-235ENST00000490354 SH3D19Q5HYK7 790 aa8.4□□□□□ -1.06
RBM39-235ENST00000490354 PPP2R2DQ66LE6 453 aa8.4□□□□□ -1.06
RBM39-235ENST00000490354 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.4□□□□□ -1.06
RBM39-235ENST00000490354 SLC35F4A4IF30 521 aa8.39□□□□□ -1.07
RBM39-235ENST00000490354 RELBQ01201 579 aa8.39□□□□□ -1.07
RBM39-235ENST00000490354 PTK2Q05397 1052 aa8.39□□□□□ -1.07
RBM39-235ENST00000490354 KCNMA1Q12791 1236 aa8.39□□□□□ -1.07
RBM39-235ENST00000490354 NANOS1Q8WY41 292 aaKnown RBP8.39□□□□□ -1.07
RBM39-235ENST00000490354 COL25A1Q9BXS0 654 aaPredicted RBP8.39□□□□□ -1.07
RBM39-235ENST00000490354 GPBP1L1Q9HC44 474 aaPredicted RBP8.39□□□□□ -1.07
RBM39-235ENST00000490354 ATP1B4Q9UN42 357 aaPredicted RBP8.39□□□□□ -1.07
RBM39-235ENST00000490354 AP1G2O75843 785 aa8.38□□□□□ -1.07
RBM39-235ENST00000490354 GSK3AP49840 483 aa8.38□□□□□ -1.07
RBM39-235ENST00000490354 ADAM32Q8TC27 787 aa8.38□□□□□ -1.07
RBM39-235ENST00000490354 EPS8L1Q8TE68 723 aa8.38□□□□□ -1.07
RBM39-235ENST00000490354 INSM2Q96T92 566 aaPredicted RBP8.38□□□□□ -1.07
RBM39-235ENST00000490354 FAM117AQ9C073 453 aa8.38□□□□□ -1.07
RBM39-235ENST00000490354 TMPRSS4Q9NRS4 437 aa8.38□□□□□ -1.07
RBM39-235ENST00000490354 MYO15BQ96JP2 1530 aa8.38□□□□□ -1.07
RBM39-235ENST00000490354 RNFT1Q5M7Z0 435 aa8.37□□□□□ -1.07
RBM39-235ENST00000490354 KDM4CQ9H3R0 1056 aa8.37□□□□□ -1.07
RBM39-235ENST00000490354 RAB15P59190 212 aa8.36□□□□□ -1.07
RBM39-235ENST00000490354 ZNF395Q9H8N7 513 aaPredicted RBP8.36□□□□□ -1.07
RBM39-235ENST00000490354 HMX1Q9NP08 348 aaPredicted RBP8.36□□□□□ -1.07
RBM39-235ENST00000490354 POLMQ9NP87 494 aaPredicted RBP8.36□□□□□ -1.07
RBM39-235ENST00000490354 GPSM3Q9Y4H4 160 aa8.36□□□□□ -1.07
RBM39-235ENST00000490354 ITGA6P23229 1130 aa8.35□□□□□ -1.07
RBM39-235ENST00000490354 VWA5B2Q8N398 1253 aa8.35□□□□□ -1.07
RBM39-235ENST00000490354 KCTD17Q8N5Z5 321 aa8.35□□□□□ -1.07
RBM39-235ENST00000490354 ZNF784Q8NCA9 323 aaPredicted RBP8.35□□□□□ -1.07
RBM39-235ENST00000490354 ADAMTS8Q9UP79 889 aa8.35□□□□□ -1.07
RBM39-235ENST00000490354 CDC14CA4D256 554 aa8.34□□□□□ -1.07
RBM39-235ENST00000490354 NBPF20Q3BBV1 942 aa8.34□□□□□ -1.07
RBM39-235ENST00000490354 ZNF385CQ66K41 422 aaPredicted RBP8.34□□□□□ -1.07
RBM39-235ENST00000490354 RNF217Q8TC41 542 aa8.34□□□□□ -1.07
RBM39-235ENST00000490354 DDRGK1Q96HY6 314 aa8.34□□□□□ -1.07
RBM39-235ENST00000490354 USP17L8P0C7I0 530 aa8.33□□□□□ -1.08
RBM39-235ENST00000490354 ERVH48-1M5A8F1 160 aa8.32□□□□□ -1.08
RBM39-235ENST00000490354 LILRA1O75019 489 aa8.32□□□□□ -1.08
RBM39-235ENST00000490354 ADH1AP07327 375 aa8.32□□□□□ -1.08
RBM39-235ENST00000490354 ADD1P35611 737 aaKnown RBP8.32□□□□□ -1.08
RBM39-235ENST00000490354 SV2AQ7L0J3 742 aa8.32□□□□□ -1.08
RBM39-235ENST00000490354 DZIP3Q86Y13 1208 aaKnown RBP8.32□□□□□ -1.08
RBM39-235ENST00000490354 WHAMMQ8TF30 809 aa8.32□□□□□ -1.08
RBM39-235ENST00000490354 SENP3-EIF4A1A0A087X0R7 540 aa8.31□□□□□ -1.08
RBM39-235ENST00000490354 RASSF7Q02833 373 aa8.31□□□□□ -1.08
RBM39-235ENST00000490354 FOXD4L5Q5VV16 416 aaPredicted RBP8.31□□□□□ -1.08
RBM39-235ENST00000490354 TMEM151AQ8N4L1 468 aa8.31□□□□□ -1.08
RBM39-235ENST00000490354 SVOPQ8N4V2 548 aa8.31□□□□□ -1.08
RBM39-235ENST00000490354 KDF1Q8NAX2 398 aaPredicted RBP8.31□□□□□ -1.08
RBM39-235ENST00000490354 NACADO15069 1562 aa8.31□□□□□ -1.08
RBM39-235ENST00000490354 GDF11O95390 407 aa8.3□□□□□ -1.08
RBM39-235ENST00000490354 SLURP2P0DP57 97 aa8.3□□□□□ -1.08
RBM39-235ENST00000490354 PTGIRP43119 386 aa8.3□□□□□ -1.08
RBM39-235ENST00000490354 PNMA1Q8ND90 353 aa8.3□□□□□ -1.08
RBM39-235ENST00000490354 LOC100996750A0A140TA64 210 aa8.29□□□□□ -1.08
RBM39-235ENST00000490354 ESPNB1AK53 854 aa8.29□□□□□ -1.08
RBM39-235ENST00000490354 RFC5P40937 340 aa8.29□□□□□ -1.08
RBM39-235ENST00000490354 KRTAP4-6Q9BYQ5 205 aa8.29□□□□□ -1.08
RBM39-235ENST00000490354 RNF225M0QZC1 329 aaPredicted RBP8.28□□□□□ -1.08
RBM39-235ENST00000490354 ARHGEF15O94989 841 aa8.27□□□□□ -1.09
RBM39-235ENST00000490354 SUZ12Q15022 739 aaKnown RBP8.27□□□□□ -1.09
RBM39-235ENST00000490354 CYLDQ9NQC7 956 aa8.27□□□□□ -1.09
RBM39-235ENST00000490354 CUEDC1Q9NWM3 386 aaPredicted RBP8.27□□□□□ -1.09
RBM39-235ENST00000490354 LYSMD3Q7Z3D4 306 aa8.26□□□□□ -1.09
RBM39-235ENST00000490354 TRIM34Q9BYJ4 488 aa8.26□□□□□ -1.09
RBM39-235ENST00000490354 PRICKLE2Q7Z3G6 844 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms