RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 AXIN2Q9Y2T1 843 aa21.81■■□□□ 1.08
CLIC4-203ENST00000489758 HOXC9P31274 260 aa21.8■■□□□ 1.08
CLIC4-203ENST00000489758 SLIT2O94813 1529 aa21.8■■□□□ 1.08
CLIC4-203ENST00000489758 COL18A1P39060 1754 aa21.79■■□□□ 1.08
CLIC4-203ENST00000489758 COL14A1Q05707 1796 aaKnown RBP21.79■■□□□ 1.08
CLIC4-203ENST00000489758 CAMTA1Q9Y6Y1 1673 aa21.79■■□□□ 1.08
CLIC4-203ENST00000489758 FLT4P35916 1363 aa21.79■■□□□ 1.08
CLIC4-203ENST00000489758 ANP32CO43423 234 aa21.79■■□□□ 1.08
CLIC4-203ENST00000489758 MTHFSP49914 203 aa21.79■■□□□ 1.08
CLIC4-203ENST00000489758 FNBP4Q8N3X1 1017 aaPredicted RBP21.79■■□□□ 1.08
CLIC4-203ENST00000489758 MYBBP1AQ9BQG0 1328 aaKnown RBP21.79■■□□□ 1.08
CLIC4-203ENST00000489758 AMPHP49418 695 aa21.78■■□□□ 1.08
CLIC4-203ENST00000489758 NGLY1Q96IV0 654 aa21.78■■□□□ 1.08
CLIC4-203ENST00000489758 CDK12Q9NYV4 1490 aaPredicted RBP21.77■■□□□ 1.08
CLIC4-203ENST00000489758 PPM1GO15355 546 aaPredicted RBP21.77■■□□□ 1.08
CLIC4-203ENST00000489758 HSP90AB2PQ58FF8 381 aa21.77■■□□□ 1.08
CLIC4-203ENST00000489758 BLMP54132 1417 aaPredicted RBP21.77■■□□□ 1.08
CLIC4-203ENST00000489758 LTN1O94822 1766 aa21.76■■□□□ 1.07
CLIC4-203ENST00000489758 INSRP06213 1382 aa21.76■■□□□ 1.07
CLIC4-203ENST00000489758 BTG4Q9NY30 223 aa21.76■■□□□ 1.07
CLIC4-203ENST00000489758 BCL9LQ86UU0 1499 aa21.76■■□□□ 1.07
CLIC4-203ENST00000489758 COL5A2P05997 1499 aaPredicted RBP21.75■■□□□ 1.07
CLIC4-203ENST00000489758 PLCH1Q4KWH8 1693 aa21.74■■□□□ 1.07
CLIC4-203ENST00000489758 AFF2P51816 1311 aa21.74■■□□□ 1.07
CLIC4-203ENST00000489758 COL3A1P02461 1466 aaPredicted RBP21.72■■□□□ 1.07
CLIC4-203ENST00000489758 ANKRD24Q8TF21 1146 aa21.72■■□□□ 1.07
CLIC4-203ENST00000489758 ERBB3P21860 1342 aa21.72■■□□□ 1.07
CLIC4-203ENST00000489758 ZNF772Q68DY9 489 aaPredicted RBP21.71■■□□□ 1.07
CLIC4-203ENST00000489758 UNC5CLQ8IV45 518 aa21.71■■□□□ 1.07
CLIC4-203ENST00000489758 USP21Q9UK80 565 aa21.71■■□□□ 1.07
CLIC4-203ENST00000489758 NRAPQ86VF7 1730 aa21.71■■□□□ 1.07
CLIC4-203ENST00000489758 NWD2Q9ULI1 1742 aa21.7■■□□□ 1.06
CLIC4-203ENST00000489758 MAP2P11137 1827 aaKnown RBP21.7■■□□□ 1.06
CLIC4-203ENST00000489758 EIF4A2Q14240 407 aaKnown RBP21.69■■□□□ 1.06
CLIC4-203ENST00000489758 WDR17Q8IZU2 1322 aa21.69■■□□□ 1.06
CLIC4-203ENST00000489758 LARP1Q6PKG0 1096 aaKnown RBP21.68■■□□□ 1.06
CLIC4-203ENST00000489758 LTV1Q96GA3 475 aaPredicted RBP21.68■■□□□ 1.06
CLIC4-203ENST00000489758 STRN4Q9NRL3 753 aa21.68■■□□□ 1.06
CLIC4-203ENST00000489758 IL13P35225 146 aa21.67■■□□□ 1.06
CLIC4-203ENST00000489758 EVA1CP58658 441 aa21.67■■□□□ 1.06
CLIC4-203ENST00000489758 CFAP53Q96M91 514 aa21.66■■□□□ 1.06
CLIC4-203ENST00000489758 ATRNO75882 1429 aa21.65■■□□□ 1.06
CLIC4-203ENST00000489758 DIAPH1O60610 1272 aaKnown RBP21.65■■□□□ 1.06
CLIC4-203ENST00000489758 VPS72Q15906 364 aa21.65■■□□□ 1.06
CLIC4-203ENST00000489758 CCDC184Q52MB2 194 aa21.65■■□□□ 1.06
CLIC4-203ENST00000489758 CRB1P82279 1406 aa21.64■■□□□ 1.06
CLIC4-203ENST00000489758 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.64■■□□□ 1.06
CLIC4-203ENST00000489758 CSB-PGBD3P0DP91 1061 aa21.64■■□□□ 1.05
CLIC4-203ENST00000489758 RGPD5Q99666 1765 aa21.64■■□□□ 1.05
CLIC4-203ENST00000489758 NBPF6Q5VWK0 638 aa21.63■■□□□ 1.05
CLIC4-203ENST00000489758 MIER1Q8N108 512 aa21.63■■□□□ 1.05
CLIC4-203ENST00000489758 NBPF4Q96M43 638 aa21.63■■□□□ 1.05
CLIC4-203ENST00000489758 NCAPD2Q15021 1401 aa21.63■■□□□ 1.05
CLIC4-203ENST00000489758 SPATA31A5Q5VU36 1347 aa21.62■■□□□ 1.05
CLIC4-203ENST00000489758 SPATA31A7Q8IWB4 1347 aa21.62■■□□□ 1.05
CLIC4-203ENST00000489758 TOM1L2Q6ZVM7 507 aa21.62■■□□□ 1.05
CLIC4-203ENST00000489758 EYA1Q99502 592 aa21.62■■□□□ 1.05
CLIC4-203ENST00000489758 CARD10Q9BWT7 1032 aa21.62■■□□□ 1.05
CLIC4-203ENST00000489758 TRPC5Q9UL62 973 aaPredicted RBP21.62■■□□□ 1.05
CLIC4-203ENST00000489758 SPATA31A1Q5TZJ5 1347 aa21.61■■□□□ 1.05
CLIC4-203ENST00000489758 NLRP2Q9NX02 1062 aa21.61■■□□□ 1.05
CLIC4-203ENST00000489758 IGSF1Q8N6C5 1336 aa21.6■■□□□ 1.05
CLIC4-203ENST00000489758 RXRBP28702 533 aa21.6■■□□□ 1.05
CLIC4-203ENST00000489758 QTRT2Q9H974 415 aaKnown RBP21.6■■□□□ 1.05
CLIC4-203ENST00000489758 RGPD1P0DJD0 1748 aa21.59■■□□□ 1.05
CLIC4-203ENST00000489758 FAM208AQ9UK61 1670 aaKnown RBP21.59■■□□□ 1.05
CLIC4-203ENST00000489758 USHBP1Q8N6Y0 703 aa21.58■■□□□ 1.05
CLIC4-203ENST00000489758 GJD4Q96KN9 370 aaPredicted RBP21.58■■□□□ 1.05
CLIC4-203ENST00000489758 CCDC9Q9Y3X0 531 aaKnown RBP21.57■■□□□ 1.04
CLIC4-203ENST00000489758 GLI3P10071 1580 aa21.57■■□□□ 1.04
CLIC4-203ENST00000489758 CCER2I3L3R5 266 aa21.56■■□□□ 1.04
CLIC4-203ENST00000489758 MRS2Q9HD23 443 aa21.56■■□□□ 1.04
CLIC4-203ENST00000489758 USP35Q9P2H5 1018 aa21.56■■□□□ 1.04
CLIC4-203ENST00000489758 U2SURPO15042 1029 aaKnown RBP21.55■■□□□ 1.04
CLIC4-203ENST00000489758 AEBP1Q8IUX7 1158 aa21.55■■□□□ 1.04
CLIC4-203ENST00000489758 TCP11L2Q8N4U5 519 aa21.55■■□□□ 1.04
CLIC4-203ENST00000489758 NUDCQ9Y266 331 aa21.55■■□□□ 1.04
CLIC4-203ENST00000489758 THRAP3Q9Y2W1 955 aaKnown RBP21.55■■□□□ 1.04
CLIC4-203ENST00000489758 KDRP35968 1356 aa21.55■■□□□ 1.04
CLIC4-203ENST00000489758 BARGINQ6ZT62 677 aa21.54■■□□□ 1.04
CLIC4-203ENST00000489758 DISP2A7MBM2 1401 aa21.54■■□□□ 1.04
CLIC4-203ENST00000489758 SULT6B1Q6IMI4 303 aa21.53■■□□□ 1.04
CLIC4-203ENST00000489758 PNISRQ8TF01 805 aaKnown RBP21.52■■□□□ 1.04
CLIC4-203ENST00000489758 RGPD2P0DJD1 1756 aa21.51■■□□□ 1.03
CLIC4-203ENST00000489758 HMOX1P09601 288 aa21.51■■□□□ 1.03
CLIC4-203ENST00000489758 U2AF1L5P0DN76 240 aaPredicted RBP21.51■■□□□ 1.03
CLIC4-203ENST00000489758 RBM6P78332 1123 aaKnown RBP21.51■■□□□ 1.03
CLIC4-203ENST00000489758 U2AF1Q01081 240 aaKnown RBP eCLIP21.51■■□□□ 1.03
CLIC4-203ENST00000489758 MEGF6O75095 1541 aa21.5■■□□□ 1.03
CLIC4-203ENST00000489758 ONECUT3O60422 494 aaPredicted RBP21.5■■□□□ 1.03
CLIC4-203ENST00000489758 FAM98CQ17RN3 349 aaKnown RBP21.5■■□□□ 1.03
CLIC4-203ENST00000489758 UPF1Q92900 1129 aaKnown RBP eCLIP21.49■■□□□ 1.03
CLIC4-203ENST00000489758 RSPH6AQ9H0K4 717 aa21.49■■□□□ 1.03
CLIC4-203ENST00000489758 IL2RBP14784 551 aa21.48■■□□□ 1.03
CLIC4-203ENST00000489758 ADAMTS8Q9UP79 889 aa21.48■■□□□ 1.03
CLIC4-203ENST00000489758 OVOS2A0A0G2JMS6 1433 aa21.47■■□□□ 1.03
CLIC4-203ENST00000489758 FCHSD2O94868 740 aa21.47■■□□□ 1.03
CLIC4-203ENST00000489758 WDR43Q15061 677 aaKnown RBP eCLIP21.47■■□□□ 1.03
CLIC4-203ENST00000489758 THSD7AQ9UPZ6 1657 aa21.47■■□□□ 1.03
CLIC4-203ENST00000489758 RAPGEF4Q8WZA2 1011 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms