RNA–Protein interactions for RNA: ENST00000489597.1

SP110-213, Transcript of SP110 nuclear body protein, humanhuman

TSL 2

Gene SP110, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP110-213ENST00000489597 TRIM26Q12899 539 aaPredicted RBP10.21□□□□□ -0.77
SP110-213ENST00000489597 NBPF20Q3BBV1 942 aa10.21□□□□□ -0.77
SP110-213ENST00000489597 C4orf48Q5BLP8 95 aa10.21□□□□□ -0.77
SP110-213ENST00000489597 RNF20Q5VTR2 975 aa10.21□□□□□ -0.77
SP110-213ENST00000489597 SEPT12Q8IYM1 358 aa10.21□□□□□ -0.77
SP110-213ENST00000489597 PLPP7Q8NBV4 271 aa10.21□□□□□ -0.77
SP110-213ENST00000489597 FOXJ1Q92949 421 aa10.21□□□□□ -0.77
SP110-213ENST00000489597 MAGEB6P1A0A0J9YX57 407 aa10.2□□□□□ -0.78
SP110-213ENST00000489597 ZBTB7CA1YPR0 619 aa10.2□□□□□ -0.78
SP110-213ENST00000489597 TRIM32Q13049 653 aa10.2□□□□□ -0.78
SP110-213ENST00000489597 AGERQ15109 404 aa10.2□□□□□ -0.78
SP110-213ENST00000489597 LINC01559Q495D7 138 aa10.2□□□□□ -0.78
SP110-213ENST00000489597 IFFO2Q5TF58 517 aa10.2□□□□□ -0.78
SP110-213ENST00000489597 SLC10A4Q96EP9 437 aa10.2□□□□□ -0.78
SP110-213ENST00000489597 CARD14Q9BXL6 1004 aa10.2□□□□□ -0.78
SP110-213ENST00000489597 CCDC180Q9P1Z9 1646 aa10.2□□□□□ -0.78
SP110-213ENST00000489597 FAM196BA6NMK8 535 aa10.19□□□□□ -0.78
SP110-213ENST00000489597 ESPNB1AK53 854 aa10.19□□□□□ -0.78
SP110-213ENST00000489597 ATP5J2-PTCD1G3V325 749 aa10.19□□□□□ -0.78
SP110-213ENST00000489597 TRAF7Q6Q0C0 670 aa10.19□□□□□ -0.78
SP110-213ENST00000489597 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.19□□□□□ -0.78
SP110-213ENST00000489597 PATL2C9JE40 543 aaKnown RBP10.18□□□□□ -0.78
SP110-213ENST00000489597 MAP4K5Q9Y4K4 846 aa10.18□□□□□ -0.78
SP110-213ENST00000489597 PPEF1O14829 653 aaPredicted RBP10.17□□□□□ -0.78
SP110-213ENST00000489597 VARSP26640 1264 aaKnown RBP10.17□□□□□ -0.78
SP110-213ENST00000489597 NCOA4Q13772 614 aa10.17□□□□□ -0.78
SP110-213ENST00000489597 EML3Q32P44 896 aa10.17□□□□□ -0.78
SP110-213ENST00000489597 PLA2G2CQ5R387 149 aa10.16□□□□□ -0.78
SP110-213ENST00000489597 MKRN1Q9UHC7 482 aaKnown RBP10.16□□□□□ -0.78
SP110-213ENST00000489597 TMEM88BA6NKF7 163 aa10.15□□□□□ -0.78
SP110-213ENST00000489597 BRD1O95696 1058 aa10.15□□□□□ -0.78
SP110-213ENST00000489597 PPP1R18Q6NYC8 613 aa10.15□□□□□ -0.78
SP110-213ENST00000489597 TRIM50Q86XT4 487 aa10.15□□□□□ -0.78
SP110-213ENST00000489597 DOLKQ9UPQ8 538 aa10.15□□□□□ -0.78
SP110-213ENST00000489597 GIGYF1O75420 1035 aaPredicted RBP10.14□□□□□ -0.79
SP110-213ENST00000489597 PODXL2Q9NZ53 605 aa10.14□□□□□ -0.79
SP110-213ENST00000489597 USP17L15C9J2P7 530 aa10.13□□□□□ -0.79
SP110-213ENST00000489597 USP17L10C9JJH3 530 aa10.13□□□□□ -0.79
SP110-213ENST00000489597 USP17L13C9JLJ4 530 aa10.13□□□□□ -0.79
SP110-213ENST00000489597 USP17L12C9JPN9 530 aa10.13□□□□□ -0.79
SP110-213ENST00000489597 USP17L11C9JVI0 530 aa10.13□□□□□ -0.79
SP110-213ENST00000489597 USP17L21D6R901 530 aa10.13□□□□□ -0.79
SP110-213ENST00000489597 USP17L18D6R9N7 530 aa10.13□□□□□ -0.79
SP110-213ENST00000489597 USP17L22D6RA61 530 aa10.13□□□□□ -0.79
SP110-213ENST00000489597 USP17L17D6RBQ6 530 aa10.13□□□□□ -0.79
SP110-213ENST00000489597 USP17L19D6RCP7 530 aa10.13□□□□□ -0.79
SP110-213ENST00000489597 USP17L20D6RJB6 530 aa10.13□□□□□ -0.79
SP110-213ENST00000489597 ATP1A2P50993 1020 aa10.13□□□□□ -0.79
SP110-213ENST00000489597 SKOR1P84550 965 aa10.13□□□□□ -0.79
SP110-213ENST00000489597 USP17L24Q0WX57 530 aa10.13□□□□□ -0.79
SP110-213ENST00000489597 CDCA8Q53HL2 280 aa10.13□□□□□ -0.79
SP110-213ENST00000489597 LARP1Q6PKG0 1096 aaKnown RBP10.13□□□□□ -0.79
SP110-213ENST00000489597 DEPDC4Q8N2C3 294 aa10.13□□□□□ -0.79
SP110-213ENST00000489597 MPNDQ8N594 471 aa10.13□□□□□ -0.79
SP110-213ENST00000489597 SIRT1Q96EB6 747 aa10.13□□□□□ -0.79
SP110-213ENST00000489597 CCDC85AQ96PX6 553 aaPredicted RBP10.13□□□□□ -0.79
SP110-213ENST00000489597 CD2BP2O95400 341 aaKnown RBP10.12□□□□□ -0.79
SP110-213ENST00000489597 KCNA1Q09470 495 aa10.12□□□□□ -0.79
SP110-213ENST00000489597 PTK7Q13308 1070 aa10.12□□□□□ -0.79
SP110-213ENST00000489597 ZMIZ1Q9ULJ6 1067 aa10.12□□□□□ -0.79
SP110-213ENST00000489597 NOVA2Q9UNW9 492 aaKnown RBP10.12□□□□□ -0.79
SP110-213ENST00000489597 NOD1Q9Y239 953 aa10.12□□□□□ -0.79
SP110-213ENST00000489597 B4GALNT3Q6L9W6 998 aa10.11□□□□□ -0.79
SP110-213ENST00000489597 TRIM52Q96A61 297 aa10.11□□□□□ -0.79
SP110-213ENST00000489597 RASA1P20936 1047 aa10.1□□□□□ -0.79
SP110-213ENST00000489597 CRTC2Q53ET0 693 aaPredicted RBP10.1□□□□□ -0.79
SP110-213ENST00000489597 LARGE2Q8N3Y3 721 aa10.1□□□□□ -0.79
SP110-213ENST00000489597 CDK15Q96Q40 435 aa10.1□□□□□ -0.79
SP110-213ENST00000489597 SIX5Q8N196 739 aa10.09□□□□□ -0.79
SP110-213ENST00000489597 KCTD15Q96SI1 283 aaPredicted RBP10.09□□□□□ -0.79
SP110-213ENST00000489597 CDCA7Q9BWT1 371 aaPredicted RBP10.09□□□□□ -0.79
SP110-213ENST00000489597 USP4Q13107 963 aa10.08□□□□□ -0.8
SP110-213ENST00000489597 MMRN1Q13201 1228 aa10.08□□□□□ -0.8
SP110-213ENST00000489597 TSGA10IPQ3SY00 556 aa10.08□□□□□ -0.8
SP110-213ENST00000489597 TMEM164Q5U3C3 297 aa10.08□□□□□ -0.8
SP110-213ENST00000489597 ANKMY2Q8IV38 441 aa10.08□□□□□ -0.8
SP110-213ENST00000489597 OGFOD1Q8N543 542 aa10.08□□□□□ -0.8
SP110-213ENST00000489597 ZCCHC6Q5VYS8 1495 aaKnown RBP10.07□□□□□ -0.8
SP110-213ENST00000489597 CLDN10P78369 228 aa10.07□□□□□ -0.8
SP110-213ENST00000489597 RC3H1Q5TC82 1133 aaKnown RBP10.07□□□□□ -0.8
SP110-213ENST00000489597 AEBP1Q8IUX7 1158 aa10.07□□□□□ -0.8
SP110-213ENST00000489597 EHBP1Q8NDI1 1231 aa10.07□□□□□ -0.8
SP110-213ENST00000489597 STK32AQ8WU08 396 aa10.07□□□□□ -0.8
SP110-213ENST00000489597 DNAAF2Q9NVR5 837 aaKnown RBP10.07□□□□□ -0.8
SP110-213ENST00000489597 SWI5Q1ZZU3 235 aa10.06□□□□□ -0.8
SP110-213ENST00000489597 OXLD1Q5BKU9 147 aa10.06□□□□□ -0.8
SP110-213ENST00000489597 INTS6LQ5JSJ4 861 aaKnown RBP10.06□□□□□ -0.8
SP110-213ENST00000489597 VASH1Q7L8A9 365 aaPredicted RBP10.06□□□□□ -0.8
SP110-213ENST00000489597 FAM200AQ8TCP9 573 aa10.06□□□□□ -0.8
SP110-213ENST00000489597 PCDHB11Q9Y5F2 797 aa10.06□□□□□ -0.8
SP110-213ENST00000489597 GTF2IP78347 998 aa10.05□□□□□ -0.8
SP110-213ENST00000489597 LIAT1Q6ZQX7 453 aa10.05□□□□□ -0.8
SP110-213ENST00000489597 CLP1Q92989 425 aaKnown RBP10.05□□□□□ -0.8
SP110-213ENST00000489597 WNT7AO00755 349 aa10.04□□□□□ -0.8
SP110-213ENST00000489597 DKK1O94907 266 aa10.04□□□□□ -0.8
SP110-213ENST00000489597 DHX9Q08211 1270 aaKnown RBP10.04□□□□□ -0.8
SP110-213ENST00000489597 EMID1Q96A84 441 aaPredicted RBP10.04□□□□□ -0.8
SP110-213ENST00000489597 PCDHGA11Q9Y5H2 935 aa10.04□□□□□ -0.8
SP110-213ENST00000489597 ZBTB7BO15156 539 aaPredicted RBP10.03□□□□□ -0.8
SP110-213ENST00000489597 SIAH2O43255 324 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms