RNA–Protein interactions for RNA: ENST00000489597.1

SP110-213, Transcript of SP110 nuclear body protein, humanhuman

TSL 2

Gene SP110, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP110-213ENST00000489597 CHIC1Q5VXU3 224 aa24.78■■□□□ 1.56
SP110-213ENST00000489597 AEBP2Q6ZN18 517 aaPredicted RBP24.77■■□□□ 1.56
SP110-213ENST00000489597 PHF23Q9BUL5 403 aaPredicted RBP21.78■■□□□ 1.08
SP110-213ENST00000489597 SENP3Q9H4L4 574 aaPredicted RBP21.04■□□□□ 0.96
SP110-213ENST00000489597 PLPPR3Q6T4P5 718 aa20.36■□□□□ 0.85
SP110-213ENST00000489597 FOXD1Q16676 465 aa19.38■□□□□ 0.69
SP110-213ENST00000489597 PPP6R1Q9UPN7 881 aa19.01■□□□□ 0.63
SP110-213ENST00000489597 ADRA2BP18089 450 aa19■□□□□ 0.63
SP110-213ENST00000489597 PIAS4Q8N2W9 510 aaPredicted RBP18.39■□□□□ 0.53
SP110-213ENST00000489597 KCNA4P22459 653 aa18.06■□□□□ 0.48
SP110-213ENST00000489597 PPP4R3CPQ6ZMV5 832 aa17.95■□□□□ 0.46
SP110-213ENST00000489597 MSH5O43196 834 aa17.76■□□□□ 0.43
SP110-213ENST00000489597 NCBP3Q53F19 620 aaKnown RBP17.69■□□□□ 0.42
SP110-213ENST00000489597 SCAF1Q9H7N4 1312 aaKnown RBP17.51■□□□□ 0.39
SP110-213ENST00000489597 CNKSR2Q8WXI2 1034 aa17.39■□□□□ 0.37
SP110-213ENST00000489597 NPM3O75607 178 aaKnown RBP17.37■□□□□ 0.37
SP110-213ENST00000489597 SLC4A1APQ9BWU0 796 aaKnown RBP17.32■□□□□ 0.36
SP110-213ENST00000489597 EHMT2Q96KQ7 1210 aa17.3■□□□□ 0.36
SP110-213ENST00000489597 MAPK8IP2Q13387 824 aaPredicted RBP17.06■□□□□ 0.32
SP110-213ENST00000489597 DNAJC5BQ9UF47 199 aa17.02■□□□□ 0.32
SP110-213ENST00000489597 CSRNP3Q8WYN3 585 aa16.97■□□□□ 0.31
SP110-213ENST00000489597 RNF216Q9NWF9 866 aaPredicted RBP16.94■□□□□ 0.3
SP110-213ENST00000489597 DMRT2Q9Y5R5 561 aa16.87■□□□□ 0.29
SP110-213ENST00000489597 HOXD11P31277 338 aaPredicted RBP16.75■□□□□ 0.27
SP110-213ENST00000489597 ZBTB22O15209 634 aa16.63■□□□□ 0.25
SP110-213ENST00000489597 FOXD4L1Q9NU39 408 aa16.56■□□□□ 0.24
SP110-213ENST00000489597 SLC4A2P04920 1241 aa16.27■□□□□ 0.2
SP110-213ENST00000489597 MYCNP04198 464 aaPredicted RBP16.09■□□□□ 0.17
SP110-213ENST00000489597 ATXN8OSP0DMR3 200 aa16.02■□□□□ 0.16
SP110-213ENST00000489597 DCAF8L1A6NGE4 600 aa15.94■□□□□ 0.14
SP110-213ENST00000489597 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.86■□□□□ 0.13
SP110-213ENST00000489597 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.76■□□□□ 0.11
SP110-213ENST00000489597 HNRNPUL2Q1KMD3 747 aaKnown RBP15.76■□□□□ 0.11
SP110-213ENST00000489597 SAMD1Q6SPF0 538 aaPredicted RBP15.71■□□□□ 0.11
SP110-213ENST00000489597 U3KPZ7 1027 aaPredicted RBP15.69■□□□□ 0.1
SP110-213ENST00000489597 ATF5Q9Y2D1 282 aaPredicted RBP15.5■□□□□ 0.07
SP110-213ENST00000489597 APLP2Q06481 763 aa15.49■□□□□ 0.07
SP110-213ENST00000489597 FKBP8Q14318 412 aa15.27■□□□□ 0.04
SP110-213ENST00000489597 ZNF219Q9P2Y4 722 aaPredicted RBP15.27■□□□□ 0.04
SP110-213ENST00000489597 RNF39Q9H2S5 420 aa15.25■□□□□ 0.03
SP110-213ENST00000489597 POTEDQ86YR6 584 aa15.19■□□□□ 0.02
SP110-213ENST00000489597 C1QBPQ07021 282 aaKnown RBP15.13■□□□□ 0.01
SP110-213ENST00000489597 SPINK5Q9NQ38 1064 aaPredicted RBP15.04■□□□□ -0
SP110-213ENST00000489597 TRHP20396 242 aaPredicted RBP14.98□□□□□ -0.01
SP110-213ENST00000489597 CAPN15O75808 1086 aa14.95□□□□□ -0.02
SP110-213ENST00000489597 AMER1Q5JTC6 1135 aaPredicted RBP14.92□□□□□ -0.02
SP110-213ENST00000489597 FBLN2P98095 1184 aa14.91□□□□□ -0.02
SP110-213ENST00000489597 MKRN4PQ13434 485 aaPredicted RBP14.9□□□□□ -0.02
SP110-213ENST00000489597 POLA2Q14181 598 aa14.89□□□□□ -0.03
SP110-213ENST00000489597 ZBTB12Q9Y330 459 aaPredicted RBP14.84□□□□□ -0.03
SP110-213ENST00000489597 SPDYE4A6NLX3 237 aa14.82□□□□□ -0.04
SP110-213ENST00000489597 PROM2Q8N271 834 aa14.77□□□□□ -0.05
SP110-213ENST00000489597 RTN4Q9NQC3 1192 aaKnown RBP14.77□□□□□ -0.05
SP110-213ENST00000489597 FBXO3Q9UK99 471 aa14.71□□□□□ -0.05
SP110-213ENST00000489597 ABCB7O75027 752 aa14.67□□□□□ -0.06
SP110-213ENST00000489597 DSG3P32926 999 aa14.65□□□□□ -0.06
SP110-213ENST00000489597 SPDYE2BA6NHP3 402 aa14.45□□□□□ -0.1
SP110-213ENST00000489597 SPDYE6P0CI01 402 aa14.45□□□□□ -0.1
SP110-213ENST00000489597 SPDYE2Q495Y8 402 aa14.45□□□□□ -0.1
SP110-213ENST00000489597 VASPP50552 380 aaPredicted RBP14.44□□□□□ -0.1
SP110-213ENST00000489597 CACNB1Q02641 598 aaPredicted RBP14.4□□□□□ -0.1
SP110-213ENST00000489597 SSUH2Q9Y2M2 353 aa14.39□□□□□ -0.11
SP110-213ENST00000489597 ZNF692Q9BU19 519 aaPredicted RBP14.38□□□□□ -0.11
SP110-213ENST00000489597 OSCARQ8IYS5 282 aa14.37□□□□□ -0.11
SP110-213ENST00000489597 STAG3Q9UJ98 1225 aa14.27□□□□□ -0.13
SP110-213ENST00000489597 IFNLR1Q8IU57 520 aaPredicted RBP14.25□□□□□ -0.13
SP110-213ENST00000489597 SLC24A1O60721 1099 aa14.23□□□□□ -0.13
SP110-213ENST00000489597 PABPN1Q86U42 306 aaKnown RBP eCLIP14.19□□□□□ -0.14
SP110-213ENST00000489597 SPOCK2Q92563 424 aa14.04□□□□□ -0.16
SP110-213ENST00000489597 RBM42Q9BTD8 480 aaKnown RBP14.03□□□□□ -0.16
SP110-213ENST00000489597 PLCD3Q8N3E9 789 aa14.01□□□□□ -0.17
SP110-213ENST00000489597 KLHL34Q8N239 644 aa14□□□□□ -0.17
SP110-213ENST00000489597 PKD2Q13563 968 aa13.98□□□□□ -0.17
SP110-213ENST00000489597 MIER1Q8N108 512 aa13.96□□□□□ -0.17
SP110-213ENST00000489597 AKT1S1Q96B36 256 aa13.95□□□□□ -0.18
SP110-213ENST00000489597 ZBTB47Q9UFB7 747 aaPredicted RBP13.94□□□□□ -0.18
SP110-213ENST00000489597 PLEKHG5O94827 1062 aa13.93□□□□□ -0.18
SP110-213ENST00000489597 SPDYE1Q8NFV5 336 aaPredicted RBP13.87□□□□□ -0.19
SP110-213ENST00000489597 ECM2O94769 699 aaPredicted RBP13.78□□□□□ -0.2
SP110-213ENST00000489597 PLCB2Q00722 1185 aa13.75□□□□□ -0.21
SP110-213ENST00000489597 REM2Q8IYK8 340 aaPredicted RBP13.74□□□□□ -0.21
SP110-213ENST00000489597 DCAF8L2P0C7V8 631 aa13.73□□□□□ -0.21
SP110-213ENST00000489597 TRIM41Q8WV44 630 aa13.73□□□□□ -0.21
SP110-213ENST00000489597 PRR29P0C7W0 189 aa13.67□□□□□ -0.22
SP110-213ENST00000489597 CLEC11AQ9Y240 323 aa13.65□□□□□ -0.22
SP110-213ENST00000489597 GSE1Q14687 1217 aa13.64□□□□□ -0.23
SP110-213ENST00000489597 CIZ1Q9ULV3 898 aaPredicted RBP13.64□□□□□ -0.23
SP110-213ENST00000489597 CREBZFQ9NS37 354 aa13.63□□□□□ -0.23
SP110-213ENST00000489597 RGL2O15211 777 aa13.62□□□□□ -0.23
SP110-213ENST00000489597 NUBP1P53384 320 aa13.62□□□□□ -0.23
SP110-213ENST00000489597 BBXQ8WY36 941 aaPredicted RBP13.6□□□□□ -0.23
SP110-213ENST00000489597 MNX1P50219 401 aaPredicted RBP13.58□□□□□ -0.24
SP110-213ENST00000489597 PITPNM1O00562 1244 aa13.56□□□□□ -0.24
SP110-213ENST00000489597 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.54□□□□□ -0.24
SP110-213ENST00000489597 NPM1P06748 294 aaKnown RBP eCLIP13.51□□□□□ -0.25
SP110-213ENST00000489597 FAM212AQ96EL1 285 aa13.5□□□□□ -0.25
SP110-213ENST00000489597 DCAF8Q5TAQ9 597 aa13.46□□□□□ -0.25
SP110-213ENST00000489597 TAOK2Q9UL54 1235 aa13.45□□□□□ -0.26
SP110-213ENST00000489597 CHRM1P11229 460 aaPredicted RBP13.44□□□□□ -0.26
SP110-213ENST00000489597 HAP1P54257 671 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms