RNA–Protein interactions for RNA: ENST00000489551.5

CSF3R-213, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 1 (best)

Gene CSF3R, Length 787 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-213ENST00000489551 CASZ1Q86V15 1759 aa14.5□□□□□ -0.09
CSF3R-213ENST00000489551 OVOS2A0A0G2JMS6 1433 aa14.49□□□□□ -0.09
CSF3R-213ENST00000489551 OVOS2A0A0J9YW53 1432 aa14.49□□□□□ -0.09
CSF3R-213ENST00000489551 OVOS2Q6IE36 1432 aa14.49□□□□□ -0.09
CSF3R-213ENST00000489551 USP54Q70EL1 1684 aa14.49□□□□□ -0.09
CSF3R-213ENST00000489551 WDR17Q8IZU2 1322 aa14.49□□□□□ -0.09
CSF3R-213ENST00000489551 NEUROD1Q13562 356 aa14.49□□□□□ -0.09
CSF3R-213ENST00000489551 LTN1O94822 1766 aa14.49□□□□□ -0.09
CSF3R-213ENST00000489551 ROCK2O75116 1388 aaKnown RBP14.48□□□□□ -0.09
CSF3R-213ENST00000489551 TOM1L2Q6ZVM7 507 aa14.48□□□□□ -0.09
CSF3R-213ENST00000489551 MARCH10Q8NA82 808 aaPredicted RBP14.48□□□□□ -0.09
CSF3R-213ENST00000489551 CD163L1Q9NR16 1453 aa14.48□□□□□ -0.09
CSF3R-213ENST00000489551 DDB1Q16531 1140 aa14.47□□□□□ -0.09
CSF3R-213ENST00000489551 PROM2Q8N271 834 aa14.47□□□□□ -0.09
CSF3R-213ENST00000489551 SOX12O15370 315 aa14.46□□□□□ -0.09
CSF3R-213ENST00000489551 ZNF692Q9BU19 519 aaPredicted RBP14.46□□□□□ -0.09
CSF3R-213ENST00000489551 ANO8Q9HCE9 1232 aaPredicted RBP14.46□□□□□ -0.09
CSF3R-213ENST00000489551 PLSCR1O15162 318 aa14.45□□□□□ -0.1
CSF3R-213ENST00000489551 NBPF14Q5TI25 921 aa14.45□□□□□ -0.1
CSF3R-213ENST00000489551 UTRNP46939 3433 aa14.45□□□□□ -0.1
CSF3R-213ENST00000489551 KTN1Q86UP2 1357 aaKnown RBP14.45□□□□□ -0.1
CSF3R-213ENST00000489551 TTC21AQ8NDW8 1320 aa14.44□□□□□ -0.1
CSF3R-213ENST00000489551 BCL9O00512 1426 aa14.44□□□□□ -0.1
CSF3R-213ENST00000489551 CARD10Q9BWT7 1032 aa14.44□□□□□ -0.1
CSF3R-213ENST00000489551 PDGFDQ9GZP0 370 aaPredicted RBP14.44□□□□□ -0.1
CSF3R-213ENST00000489551 KAT6BQ8WYB5 2073 aa14.43□□□□□ -0.1
CSF3R-213ENST00000489551 C11orf95C9JLR9 678 aaPredicted RBP14.43□□□□□ -0.1
CSF3R-213ENST00000489551 KCNH5Q8NCM2 988 aa14.43□□□□□ -0.1
CSF3R-213ENST00000489551 BCL11BQ9C0K0 894 aaPredicted RBP14.43□□□□□ -0.1
CSF3R-213ENST00000489551 ABCC6O95255 1503 aa14.42□□□□□ -0.1
CSF3R-213ENST00000489551 USP31Q70CQ4 1352 aa14.42□□□□□ -0.1
CSF3R-213ENST00000489551 SBNO2Q9Y2G9 1366 aa14.42□□□□□ -0.1
CSF3R-213ENST00000489551 NHSQ6T4R5 1651 aa14.42□□□□□ -0.1
CSF3R-213ENST00000489551 KCNQ2O43526 872 aa14.41□□□□□ -0.1
CSF3R-213ENST00000489551 NME9Q86XW9 330 aa14.41□□□□□ -0.1
CSF3R-213ENST00000489551 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.41□□□□□ -0.1
CSF3R-213ENST00000489551 CDCA7Q9BWT1 371 aaPredicted RBP14.4□□□□□ -0.1
CSF3R-213ENST00000489551 SPON1Q9HCB6 807 aa14.4□□□□□ -0.1
CSF3R-213ENST00000489551 BTAF1O14981 1849 aa14.4□□□□□ -0.1
CSF3R-213ENST00000489551 RGPD2P0DJD1 1756 aa14.39□□□□□ -0.11
CSF3R-213ENST00000489551 MYOM1P52179 1685 aa14.39□□□□□ -0.11
CSF3R-213ENST00000489551 CSB-PGBD3P0DP91 1061 aa14.39□□□□□ -0.11
CSF3R-213ENST00000489551 SLC12A5Q9H2X9 1139 aa14.39□□□□□ -0.11
CSF3R-213ENST00000489551 TNS2Q63HR2 1409 aa14.39□□□□□ -0.11
CSF3R-213ENST00000489551 EXOC5O00471 708 aa14.38□□□□□ -0.11
CSF3R-213ENST00000489551 ERBB3P21860 1342 aa14.38□□□□□ -0.11
CSF3R-213ENST00000489551 CCDC7Q96M83 1385 aa14.37□□□□□ -0.11
CSF3R-213ENST00000489551 CARD11Q9BXL7 1154 aa14.37□□□□□ -0.11
CSF3R-213ENST00000489551 PAPPAQ13219 1627 aa14.37□□□□□ -0.11
CSF3R-213ENST00000489551 TXNRD1Q16881 649 aa14.36□□□□□ -0.11
CSF3R-213ENST00000489551 A0A1W2PP64 1363 aa14.35□□□□□ -0.11
CSF3R-213ENST00000489551 PTGER2P43116 358 aa14.35□□□□□ -0.11
CSF3R-213ENST00000489551 SHANK3Q9BYB0 1731 aa14.35□□□□□ -0.11
CSF3R-213ENST00000489551 EDC4Q6P2E9 1401 aaKnown RBP14.34□□□□□ -0.11
CSF3R-213ENST00000489551 ZBTB7AO95365 584 aa14.34□□□□□ -0.11
CSF3R-213ENST00000489551 TMC1Q8TDI8 760 aa14.34□□□□□ -0.11
CSF3R-213ENST00000489551 ACSBG1Q96GR2 724 aa14.34□□□□□ -0.11
CSF3R-213ENST00000489551 PPP1R1BQ9UD71 204 aaPredicted RBP14.34□□□□□ -0.11
CSF3R-213ENST00000489551 NINLQ9Y2I6 1382 aa14.34□□□□□ -0.11
CSF3R-213ENST00000489551 FAM208AQ9UK61 1670 aaKnown RBP14.33□□□□□ -0.11
CSF3R-213ENST00000489551 SLC15A2Q16348 729 aa14.33□□□□□ -0.12
CSF3R-213ENST00000489551 ANKRD24Q8TF21 1146 aa14.33□□□□□ -0.12
CSF3R-213ENST00000489551 TESK2Q96S53 571 aa14.33□□□□□ -0.12
CSF3R-213ENST00000489551 NLRP2Q9NX02 1062 aa14.33□□□□□ -0.12
CSF3R-213ENST00000489551 TUBGCP6Q96RT7 1819 aa14.33□□□□□ -0.12
CSF3R-213ENST00000489551 FBLN1P23142 703 aa14.32□□□□□ -0.12
CSF3R-213ENST00000489551 ATF5Q9Y2D1 282 aaPredicted RBP14.32□□□□□ -0.12
CSF3R-213ENST00000489551 IL2RBP14784 551 aa14.31□□□□□ -0.12
CSF3R-213ENST00000489551 YY1P25490 414 aa14.31□□□□□ -0.12
CSF3R-213ENST00000489551 SGIP1Q9BQI5 828 aa14.31□□□□□ -0.12
CSF3R-213ENST00000489551 HDGFL2Q7Z4V5 671 aaPredicted RBP14.3□□□□□ -0.12
CSF3R-213ENST00000489551 COL24A1Q17RW2 1714 aa14.29□□□□□ -0.12
CSF3R-213ENST00000489551 QSER1Q2KHR3 1735 aa14.29□□□□□ -0.12
CSF3R-213ENST00000489551 DOT1LQ8TEK3 1739 aa14.29□□□□□ -0.12
CSF3R-213ENST00000489551 IP6K1Q92551 441 aa14.29□□□□□ -0.12
CSF3R-213ENST00000489551 PUS7Q96PZ0 661 aaKnown RBP14.29□□□□□ -0.12
CSF3R-213ENST00000489551 LRRC4BQ9NT99 713 aa14.29□□□□□ -0.12
CSF3R-213ENST00000489551 STK32BQ9NY57 414 aa14.29□□□□□ -0.12
CSF3R-213ENST00000489551 CHD4Q14839 1912 aa14.29□□□□□ -0.12
CSF3R-213ENST00000489551 ST20-MTHFSA0A0A6YYL1 179 aa14.28□□□□□ -0.12
CSF3R-213ENST00000489551 LY75O60449 1722 aa14.28□□□□□ -0.12
CSF3R-213ENST00000489551 ZNF827Q17R98 1081 aa14.28□□□□□ -0.12
CSF3R-213ENST00000489551 TONSLQ96HA7 1378 aa14.28□□□□□ -0.12
CSF3R-213ENST00000489551 GOLGB1Q14789 3259 aaKnown RBP14.27□□□□□ -0.12
CSF3R-213ENST00000489551 TERF2IPQ9NYB0 399 aa14.27□□□□□ -0.13
CSF3R-213ENST00000489551 MAP3K19Q56UN5 1328 aa14.26□□□□□ -0.13
CSF3R-213ENST00000489551 LTV1Q96GA3 475 aaPredicted RBP14.26□□□□□ -0.13
CSF3R-213ENST00000489551 SYT17Q9BSW7 474 aa14.25□□□□□ -0.13
CSF3R-213ENST00000489551 FHDC1Q9C0D6 1143 aaPredicted RBP14.25□□□□□ -0.13
CSF3R-213ENST00000489551 MTFR1LQ9H019 292 aa14.25□□□□□ -0.13
CSF3R-213ENST00000489551 HOXC9P31274 260 aa14.24□□□□□ -0.13
CSF3R-213ENST00000489551 DDX54Q8TDD1 881 aaKnown RBP14.24□□□□□ -0.13
CSF3R-213ENST00000489551 MEGF6O75095 1541 aa14.24□□□□□ -0.13
CSF3R-213ENST00000489551 KIF20BQ96Q89 1820 aa14.24□□□□□ -0.13
CSF3R-213ENST00000489551 NSD2O96028 1365 aa14.23□□□□□ -0.13
CSF3R-213ENST00000489551 KCNQ4P56696 695 aa14.23□□□□□ -0.13
CSF3R-213ENST00000489551 AKT1S1Q96B36 256 aa14.23□□□□□ -0.13
CSF3R-213ENST00000489551 RRS1Q15050 365 aaKnown RBP14.21□□□□□ -0.13
CSF3R-213ENST00000489551 COG3Q96JB2 828 aa14.21□□□□□ -0.13
CSF3R-213ENST00000489551 ANKRD36BQ8N2N9 1353 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms