RNA–Protein interactions for RNA: ENST00000489444.6

GBP3-207, Transcript of guanylate binding protein 3, humanhuman

TSL 1 (best)

Gene GBP3, Length 2,455 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-207ENST00000489444 USP31Q70CQ4 1352 aa6.74□□□□□ -1.33
GBP3-207ENST00000489444 NLRP6P59044 892 aa6.74□□□□□ -1.33
GBP3-207ENST00000489444 TMC1Q8TDI8 760 aa6.74□□□□□ -1.33
GBP3-207ENST00000489444 SPDYE4A6NLX3 237 aa6.73□□□□□ -1.33
GBP3-207ENST00000489444 GCP02774 474 aa6.73□□□□□ -1.33
GBP3-207ENST00000489444 C1QBPQ07021 282 aaKnown RBP6.73□□□□□ -1.33
GBP3-207ENST00000489444 PAXIP1Q6ZW49 1069 aaPredicted RBP6.73□□□□□ -1.33
GBP3-207ENST00000489444 KCNH5Q8NCM2 988 aa6.73□□□□□ -1.33
GBP3-207ENST00000489444 BCL11AQ9H165 835 aa6.73□□□□□ -1.33
GBP3-207ENST00000489444 A0A1W2PP64 1363 aa6.73□□□□□ -1.33
GBP3-207ENST00000489444 ANKRD36BQ8N2N9 1353 aa6.73□□□□□ -1.33
GBP3-207ENST00000489444 NFAT5O94916 1531 aa6.72□□□□□ -1.33
GBP3-207ENST00000489444 ZC3H6P61129 1189 aaKnown RBP6.72□□□□□ -1.33
GBP3-207ENST00000489444 CFAP44Q96MT7 982 aa6.72□□□□□ -1.33
GBP3-207ENST00000489444 CCDC9Q9Y3X0 531 aaKnown RBP6.72□□□□□ -1.33
GBP3-207ENST00000489444 SPATA31A5Q5VU36 1347 aa6.72□□□□□ -1.33
GBP3-207ENST00000489444 SPATA31A7Q8IWB4 1347 aa6.72□□□□□ -1.33
GBP3-207ENST00000489444 AATKQ6ZMQ8 1374 aa6.72□□□□□ -1.33
GBP3-207ENST00000489444 ONECUT3O60422 494 aaPredicted RBP6.72□□□□□ -1.33
GBP3-207ENST00000489444 SLC12A5Q9H2X9 1139 aa6.72□□□□□ -1.33
GBP3-207ENST00000489444 THSD7AQ9UPZ6 1657 aa6.72□□□□□ -1.33
GBP3-207ENST00000489444 MYOM1P52179 1685 aa6.71□□□□□ -1.33
GBP3-207ENST00000489444 CAMTA1Q9Y6Y1 1673 aa6.71□□□□□ -1.33
GBP3-207ENST00000489444 EIF4G2P78344 907 aaKnown RBP eCLIP6.71□□□□□ -1.33
GBP3-207ENST00000489444 CHRNA2Q15822 529 aa6.71□□□□□ -1.33
GBP3-207ENST00000489444 UPF1Q92900 1129 aaKnown RBP eCLIP6.71□□□□□ -1.33
GBP3-207ENST00000489444 OVOS2A0A0J9YW53 1432 aa6.71□□□□□ -1.34
GBP3-207ENST00000489444 OVOS2Q6IE36 1432 aa6.71□□□□□ -1.34
GBP3-207ENST00000489444 COL5A2P05997 1499 aaPredicted RBP6.71□□□□□ -1.34
GBP3-207ENST00000489444 SEPT12Q8IYM1 358 aa6.71□□□□□ -1.34
GBP3-207ENST00000489444 RNF39Q9H2S5 420 aa6.71□□□□□ -1.34
GBP3-207ENST00000489444 SPATA31A1Q5TZJ5 1347 aa6.71□□□□□ -1.34
GBP3-207ENST00000489444 COL18A1P39060 1754 aa6.71□□□□□ -1.34
GBP3-207ENST00000489444 EVA1CP58658 441 aa6.7□□□□□ -1.34
GBP3-207ENST00000489444 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.7□□□□□ -1.34
GBP3-207ENST00000489444 CRB1P82279 1406 aa6.7□□□□□ -1.34
GBP3-207ENST00000489444 ARHGEF25Q86VW2 580 aa6.7□□□□□ -1.34
GBP3-207ENST00000489444 NME9Q86XW9 330 aa6.7□□□□□ -1.34
GBP3-207ENST00000489444 PROM2Q8N271 834 aa6.7□□□□□ -1.34
GBP3-207ENST00000489444 STRN4Q9NRL3 753 aa6.7□□□□□ -1.34
GBP3-207ENST00000489444 THRAP3Q9Y2W1 955 aaKnown RBP6.7□□□□□ -1.34
GBP3-207ENST00000489444 HSPA5P11021 654 aaKnown RBP6.69□□□□□ -1.34
GBP3-207ENST00000489444 BARGINQ6ZT62 677 aa6.69□□□□□ -1.34
GBP3-207ENST00000489444 CCDC125Q86Z20 511 aa6.69□□□□□ -1.34
GBP3-207ENST00000489444 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.69□□□□□ -1.34
GBP3-207ENST00000489444 KIF20BQ96Q89 1820 aa6.69□□□□□ -1.34
GBP3-207ENST00000489444 BRWD3Q6RI45 1802 aa6.69□□□□□ -1.34
GBP3-207ENST00000489444 ZBTB7CA1YPR0 619 aa6.69□□□□□ -1.34
GBP3-207ENST00000489444 FAM98CQ17RN3 349 aaKnown RBP6.69□□□□□ -1.34
GBP3-207ENST00000489444 KRT27Q7Z3Y8 459 aa6.68□□□□□ -1.34
GBP3-207ENST00000489444 TCP11L2Q8N4U5 519 aa6.68□□□□□ -1.34
GBP3-207ENST00000489444 BBXQ8WY36 941 aaPredicted RBP6.68□□□□□ -1.34
GBP3-207ENST00000489444 COG3Q96JB2 828 aa6.68□□□□□ -1.34
GBP3-207ENST00000489444 WNK3Q9BYP7 1800 aa6.68□□□□□ -1.34
GBP3-207ENST00000489444 PARP4Q9UKK3 1724 aaKnown RBP6.68□□□□□ -1.34
GBP3-207ENST00000489444 WDR17Q8IZU2 1322 aa6.68□□□□□ -1.34
GBP3-207ENST00000489444 A0A0G2JS52 829 aa6.68□□□□□ -1.34
GBP3-207ENST00000489444 LARP1Q6PKG0 1096 aaKnown RBP6.68□□□□□ -1.34
GBP3-207ENST00000489444 ZRANB1Q9UGI0 708 aa6.68□□□□□ -1.34
GBP3-207ENST00000489444 LTN1O94822 1766 aa6.68□□□□□ -1.34
GBP3-207ENST00000489444 BLMP54132 1417 aaPredicted RBP6.67□□□□□ -1.34
GBP3-207ENST00000489444 ANP32EQ9BTT0 268 aa6.67□□□□□ -1.34
GBP3-207ENST00000489444 TSHZ2Q9NRE2 1034 aa6.67□□□□□ -1.34
GBP3-207ENST00000489444 FAM208AQ9UK61 1670 aaKnown RBP6.67□□□□□ -1.34
GBP3-207ENST00000489444 NSD3Q9BZ95 1437 aa6.67□□□□□ -1.34
GBP3-207ENST00000489444 RTL1A6NKG5 1358 aa6.67□□□□□ -1.34
GBP3-207ENST00000489444 CCDC7Q96M83 1385 aa6.66□□□□□ -1.34
GBP3-207ENST00000489444 RGPD1P0DJD0 1748 aa6.66□□□□□ -1.34
GBP3-207ENST00000489444 SOX12O15370 315 aa6.66□□□□□ -1.34
GBP3-207ENST00000489444 SAMD1Q6SPF0 538 aaPredicted RBP6.66□□□□□ -1.34
GBP3-207ENST00000489444 CDCA7Q9BWT1 371 aaPredicted RBP6.66□□□□□ -1.34
GBP3-207ENST00000489444 LRRC37A3O60309 1634 aa6.66□□□□□ -1.34
GBP3-207ENST00000489444 C11orf95C9JLR9 678 aaPredicted RBP6.66□□□□□ -1.34
GBP3-207ENST00000489444 MKRN4PQ13434 485 aaPredicted RBP6.66□□□□□ -1.34
GBP3-207ENST00000489444 TOM1L2Q6ZVM7 507 aa6.66□□□□□ -1.34
GBP3-207ENST00000489444 CARD10Q9BWT7 1032 aa6.66□□□□□ -1.34
GBP3-207ENST00000489444 AXIN2Q9Y2T1 843 aa6.66□□□□□ -1.34
GBP3-207ENST00000489444 U3KPZ7 1027 aaPredicted RBP6.66□□□□□ -1.34
GBP3-207ENST00000489444 FYB1O15117 783 aa6.65□□□□□ -1.34
GBP3-207ENST00000489444 CSB-PGBD3P0DP91 1061 aa6.65□□□□□ -1.34
GBP3-207ENST00000489444 RGPD5Q99666 1765 aa6.65□□□□□ -1.34
GBP3-207ENST00000489444 KIF24Q5T7B8 1368 aa6.65□□□□□ -1.34
GBP3-207ENST00000489444 ANKRD26Q9UPS8 1709 aa6.65□□□□□ -1.35
GBP3-207ENST00000489444 CGNL1Q0VF96 1302 aa6.65□□□□□ -1.35
GBP3-207ENST00000489444 DISP2A7MBM2 1401 aa6.65□□□□□ -1.35
GBP3-207ENST00000489444 SF3B2Q13435 895 aaKnown RBP6.65□□□□□ -1.35
GBP3-207ENST00000489444 IP6K1Q92551 441 aa6.65□□□□□ -1.35
GBP3-207ENST00000489444 USP35Q9P2H5 1018 aa6.65□□□□□ -1.35
GBP3-207ENST00000489444 ZNF219Q9P2Y4 722 aaPredicted RBP6.65□□□□□ -1.35
GBP3-207ENST00000489444 ERBB3P21860 1342 aa6.64□□□□□ -1.35
GBP3-207ENST00000489444 PDE3BQ13370 1112 aa6.64□□□□□ -1.35
GBP3-207ENST00000489444 CARD14Q9BXL6 1004 aa6.64□□□□□ -1.35
GBP3-207ENST00000489444 GGNBP2Q9H3C7 697 aa6.64□□□□□ -1.35
GBP3-207ENST00000489444 NSD2O96028 1365 aa6.64□□□□□ -1.35
GBP3-207ENST00000489444 FAM196AQ6ZSG2 479 aa6.64□□□□□ -1.35
GBP3-207ENST00000489444 ANKRD24Q8TF21 1146 aa6.64□□□□□ -1.35
GBP3-207ENST00000489444 POLR3GLQ9BT43 218 aa6.64□□□□□ -1.35
GBP3-207ENST00000489444 TNS1Q9HBL0 1735 aaKnown RBP6.63□□□□□ -1.35
GBP3-207ENST00000489444 SMG6Q86US8 1419 aaKnown RBP6.63□□□□□ -1.35
GBP3-207ENST00000489444 MAP3K19Q56UN5 1328 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms