RNA–Protein interactions for RNA: ENST00000489313.1

PTP4A2-206, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 1,551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-206ENST00000489313 SPON1Q9HCB6 807 aa15.62■□□□□ 0.09
PTP4A2-206ENST00000489313 BRD4O60885 1362 aaPredicted RBP15.62■□□□□ 0.09
PTP4A2-206ENST00000489313 WNK3Q9BYP7 1800 aa15.62■□□□□ 0.09
PTP4A2-206ENST00000489313 KCNQ2O43526 872 aa15.62■□□□□ 0.09
PTP4A2-206ENST00000489313 YY1P25490 414 aa15.62■□□□□ 0.09
PTP4A2-206ENST00000489313 DDB1Q16531 1140 aa15.62■□□□□ 0.09
PTP4A2-206ENST00000489313 TOM1L2Q6ZVM7 507 aa15.62■□□□□ 0.09
PTP4A2-206ENST00000489313 PTF1AQ7RTS3 328 aa15.62■□□□□ 0.09
PTP4A2-206ENST00000489313 RGPD3A6NKT7 1758 aaPredicted RBP15.61■□□□□ 0.09
PTP4A2-206ENST00000489313 RGPD4Q7Z3J3 1758 aa15.61■□□□□ 0.09
PTP4A2-206ENST00000489313 RGPD5Q99666 1765 aa15.61■□□□□ 0.09
PTP4A2-206ENST00000489313 C11orf95C9JLR9 678 aaPredicted RBP15.61■□□□□ 0.09
PTP4A2-206ENST00000489313 ANO8Q9HCE9 1232 aaPredicted RBP15.6■□□□□ 0.09
PTP4A2-206ENST00000489313 AXIN2Q9Y2T1 843 aa15.6■□□□□ 0.09
PTP4A2-206ENST00000489313 AKAP12Q02952 1782 aa15.6■□□□□ 0.09
PTP4A2-206ENST00000489313 PLSCR1O15162 318 aa15.58■□□□□ 0.09
PTP4A2-206ENST00000489313 WDR17Q8IZU2 1322 aa15.58■□□□□ 0.08
PTP4A2-206ENST00000489313 CASZ1Q86V15 1759 aa15.58■□□□□ 0.08
PTP4A2-206ENST00000489313 SOX12O15370 315 aa15.58■□□□□ 0.08
PTP4A2-206ENST00000489313 MARCH10Q8NA82 808 aaPredicted RBP15.58■□□□□ 0.08
PTP4A2-206ENST00000489313 BCL11BQ9C0K0 894 aaPredicted RBP15.58■□□□□ 0.08
PTP4A2-206ENST00000489313 CPSF1Q10570 1443 aaKnown RBP15.57■□□□□ 0.08
PTP4A2-206ENST00000489313 NINLQ9Y2I6 1382 aa15.57■□□□□ 0.08
PTP4A2-206ENST00000489313 PDGFDQ9GZP0 370 aaPredicted RBP15.57■□□□□ 0.08
PTP4A2-206ENST00000489313 EVC2Q86UK5 1308 aa15.56■□□□□ 0.08
PTP4A2-206ENST00000489313 TRPM1Q7Z4N2 1603 aa15.56■□□□□ 0.08
PTP4A2-206ENST00000489313 ARHGEF25Q86VW2 580 aa15.55■□□□□ 0.08
PTP4A2-206ENST00000489313 PROM2Q8N271 834 aa15.55■□□□□ 0.08
PTP4A2-206ENST00000489313 L3MBTL2Q969R5 705 aa15.55■□□□□ 0.08
PTP4A2-206ENST00000489313 TTC21BQ7Z4L5 1316 aa15.55■□□□□ 0.08
PTP4A2-206ENST00000489313 CSB-PGBD3P0DP91 1061 aa15.54■□□□□ 0.08
PTP4A2-206ENST00000489313 ZBTB7AO95365 584 aa15.53■□□□□ 0.08
PTP4A2-206ENST00000489313 KCNH5Q8NCM2 988 aa15.53■□□□□ 0.08
PTP4A2-206ENST00000489313 CDCA7Q9BWT1 371 aaPredicted RBP15.53■□□□□ 0.08
PTP4A2-206ENST00000489313 CARD10Q9BWT7 1032 aa15.53■□□□□ 0.08
PTP4A2-206ENST00000489313 MYOM1P52179 1685 aa15.52■□□□□ 0.08
PTP4A2-206ENST00000489313 BCL9O00512 1426 aa15.52■□□□□ 0.08
PTP4A2-206ENST00000489313 GOLGB1Q14789 3259 aaKnown RBP15.52■□□□□ 0.08
PTP4A2-206ENST00000489313 NFAT5O94916 1531 aa15.52■□□□□ 0.07
PTP4A2-206ENST00000489313 ZNF692Q9BU19 519 aaPredicted RBP15.52■□□□□ 0.07
PTP4A2-206ENST00000489313 TXNRD1Q16881 649 aa15.51■□□□□ 0.07
PTP4A2-206ENST00000489313 ATF5Q9Y2D1 282 aaPredicted RBP15.51■□□□□ 0.07
PTP4A2-206ENST00000489313 EXOC5O00471 708 aa15.49■□□□□ 0.07
PTP4A2-206ENST00000489313 SIN3AQ96ST3 1273 aa15.49■□□□□ 0.07
PTP4A2-206ENST00000489313 TTC21AQ8NDW8 1320 aa15.49■□□□□ 0.07
PTP4A2-206ENST00000489313 ROCK2O75116 1388 aaKnown RBP15.49■□□□□ 0.07
PTP4A2-206ENST00000489313 KTN1Q86UP2 1357 aaKnown RBP15.49■□□□□ 0.07
PTP4A2-206ENST00000489313 PTGER2P43116 358 aa15.49■□□□□ 0.07
PTP4A2-206ENST00000489313 STK32BQ9NY57 414 aa15.49■□□□□ 0.07
PTP4A2-206ENST00000489313 MON2Q7Z3U7 1717 aa15.49■□□□□ 0.07
PTP4A2-206ENST00000489313 TNS2Q63HR2 1409 aa15.48■□□□□ 0.07
PTP4A2-206ENST00000489313 CCDC7Q96M83 1385 aa15.48■□□□□ 0.07
PTP4A2-206ENST00000489313 KAT6BQ8WYB5 2073 aa15.47■□□□□ 0.07
PTP4A2-206ENST00000489313 NHSQ6T4R5 1651 aa15.47■□□□□ 0.07
PTP4A2-206ENST00000489313 SLC15A2Q16348 729 aa15.47■□□□□ 0.07
PTP4A2-206ENST00000489313 NEUROD1Q13562 356 aa15.46■□□□□ 0.07
PTP4A2-206ENST00000489313 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.46■□□□□ 0.07
PTP4A2-206ENST00000489313 ACSBG1Q96GR2 724 aa15.46■□□□□ 0.07
PTP4A2-206ENST00000489313 LTN1O94822 1766 aa15.46■□□□□ 0.07
PTP4A2-206ENST00000489313 ABCC6O95255 1503 aa15.46■□□□□ 0.07
PTP4A2-206ENST00000489313 NLRP2Q9NX02 1062 aa15.45■□□□□ 0.06
PTP4A2-206ENST00000489313 NME9Q86XW9 330 aa15.44■□□□□ 0.06
PTP4A2-206ENST00000489313 FHDC1Q9C0D6 1143 aaPredicted RBP15.44■□□□□ 0.06
PTP4A2-206ENST00000489313 BTAF1O14981 1849 aa15.43■□□□□ 0.06
PTP4A2-206ENST00000489313 ERBB3P21860 1342 aa15.43■□□□□ 0.06
PTP4A2-206ENST00000489313 USP54Q70EL1 1684 aa15.43■□□□□ 0.06
PTP4A2-206ENST00000489313 SYT17Q9BSW7 474 aa15.42■□□□□ 0.06
PTP4A2-206ENST00000489313 MTFR1LQ9H019 292 aa15.42■□□□□ 0.06
PTP4A2-206ENST00000489313 USP31Q70CQ4 1352 aa15.42■□□□□ 0.06
PTP4A2-206ENST00000489313 CD163L1Q9NR16 1453 aa15.42■□□□□ 0.06
PTP4A2-206ENST00000489313 PAPPAQ13219 1627 aa15.42■□□□□ 0.06
PTP4A2-206ENST00000489313 SGIP1Q9BQI5 828 aa15.41■□□□□ 0.06
PTP4A2-206ENST00000489313 SBNO2Q9Y2G9 1366 aa15.41■□□□□ 0.06
PTP4A2-206ENST00000489313 IL2RBP14784 551 aa15.41■□□□□ 0.06
PTP4A2-206ENST00000489313 CHD4Q14839 1912 aa15.4■□□□□ 0.06
PTP4A2-206ENST00000489313 ZNF784Q8NCA9 323 aaPredicted RBP15.4■□□□□ 0.06
PTP4A2-206ENST00000489313 TMC1Q8TDI8 760 aa15.4■□□□□ 0.06
PTP4A2-206ENST00000489313 ANKRD24Q8TF21 1146 aa15.4■□□□□ 0.06
PTP4A2-206ENST00000489313 ZNF827Q17R98 1081 aa15.39■□□□□ 0.05
PTP4A2-206ENST00000489313 CEP350Q5VT06 3117 aa15.39■□□□□ 0.05
PTP4A2-206ENST00000489313 ARXQ96QS3 562 aa15.38■□□□□ 0.05
PTP4A2-206ENST00000489313 SLC12A5Q9H2X9 1139 aa15.37■□□□□ 0.05
PTP4A2-206ENST00000489313 LRRC4BQ9NT99 713 aa15.37■□□□□ 0.05
PTP4A2-206ENST00000489313 HDGFL2Q7Z4V5 671 aaPredicted RBP15.36■□□□□ 0.05
PTP4A2-206ENST00000489313 CARD11Q9BXL7 1154 aa15.36■□□□□ 0.05
PTP4A2-206ENST00000489313 EDC4Q6P2E9 1401 aaKnown RBP15.36■□□□□ 0.05
PTP4A2-206ENST00000489313 A0A1W2PP64 1363 aa15.34■□□□□ 0.05
PTP4A2-206ENST00000489313 DDX54Q8TDD1 881 aaKnown RBP15.34■□□□□ 0.05
PTP4A2-206ENST00000489313 LTV1Q96GA3 475 aaPredicted RBP15.34■□□□□ 0.05
PTP4A2-206ENST00000489313 TUBGCP6Q96RT7 1819 aa15.33■□□□□ 0.05
PTP4A2-206ENST00000489313 FAM208AQ9UK61 1670 aaKnown RBP15.33■□□□□ 0.04
PTP4A2-206ENST00000489313 TERF2IPQ9NYB0 399 aa15.32■□□□□ 0.04
PTP4A2-206ENST00000489313 QSER1Q2KHR3 1735 aa15.32■□□□□ 0.04
PTP4A2-206ENST00000489313 MAP3K5Q99683 1374 aa15.32■□□□□ 0.04
PTP4A2-206ENST00000489313 RGPD2P0DJD1 1756 aa15.32■□□□□ 0.04
PTP4A2-206ENST00000489313 KCNQ4P56696 695 aa15.32■□□□□ 0.04
PTP4A2-206ENST00000489313 KLHL34Q8N239 644 aa15.32■□□□□ 0.04
PTP4A2-206ENST00000489313 IP6K1Q92551 441 aa15.32■□□□□ 0.04
PTP4A2-206ENST00000489313 AKT1S1Q96B36 256 aa15.32■□□□□ 0.04
PTP4A2-206ENST00000489313 DOT1LQ8TEK3 1739 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms