RNA–Protein interactions for RNA: ENST00000489071.5

ERGIC3-218, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-218ENST00000489071 LARP1Q6PKG0 1096 aaKnown RBP11.99□□□□□ -0.49
ERGIC3-218ENST00000489071 USP6P35125 1406 aa11.99□□□□□ -0.49
ERGIC3-218ENST00000489071 LMO7Q8WWI1 1683 aa11.99□□□□□ -0.49
ERGIC3-218ENST00000489071 TNS1Q9HBL0 1735 aaKnown RBP11.99□□□□□ -0.49
ERGIC3-218ENST00000489071 LRP5O75197 1615 aa11.98□□□□□ -0.49
ERGIC3-218ENST00000489071 ZNF692Q9BU19 519 aaPredicted RBP11.98□□□□□ -0.49
ERGIC3-218ENST00000489071 ROCK2O75116 1388 aaKnown RBP11.97□□□□□ -0.49
ERGIC3-218ENST00000489071 PSDA5PKW4 1024 aaPredicted RBP11.97□□□□□ -0.49
ERGIC3-218ENST00000489071 C11orf95C9JLR9 678 aaPredicted RBP11.97□□□□□ -0.49
ERGIC3-218ENST00000489071 TRIM37O94972 964 aa11.97□□□□□ -0.49
ERGIC3-218ENST00000489071 PARD3Q8TEW0 1356 aa11.96□□□□□ -0.49
ERGIC3-218ENST00000489071 SLC24A1O60721 1099 aa11.96□□□□□ -0.49
ERGIC3-218ENST00000489071 APBA3O96018 575 aa11.96□□□□□ -0.49
ERGIC3-218ENST00000489071 POLA2Q14181 598 aa11.96□□□□□ -0.49
ERGIC3-218ENST00000489071 EZH2Q15910 746 aaKnown RBP11.96□□□□□ -0.49
ERGIC3-218ENST00000489071 COL5A2P05997 1499 aaPredicted RBP11.95□□□□□ -0.5
ERGIC3-218ENST00000489071 AATKQ6ZMQ8 1374 aa11.95□□□□□ -0.5
ERGIC3-218ENST00000489071 ZBTB7CA1YPR0 619 aa11.95□□□□□ -0.5
ERGIC3-218ENST00000489071 CAMKK2Q96RR4 588 aa11.95□□□□□ -0.5
ERGIC3-218ENST00000489071 SLIT3O75094 1523 aa11.95□□□□□ -0.5
ERGIC3-218ENST00000489071 CRB1P82279 1406 aa11.94□□□□□ -0.5
ERGIC3-218ENST00000489071 PARP4Q9UKK3 1724 aaKnown RBP11.94□□□□□ -0.5
ERGIC3-218ENST00000489071 KCNH5Q8NCM2 988 aa11.94□□□□□ -0.5
ERGIC3-218ENST00000489071 CARD11Q9BXL7 1154 aa11.94□□□□□ -0.5
ERGIC3-218ENST00000489071 AKAP12Q02952 1782 aa11.94□□□□□ -0.5
ERGIC3-218ENST00000489071 TTC21BQ7Z4L5 1316 aa11.93□□□□□ -0.5
ERGIC3-218ENST00000489071 TTC21AQ8NDW8 1320 aa11.93□□□□□ -0.5
ERGIC3-218ENST00000489071 R3HDM1Q15032 1099 aaKnown RBP11.93□□□□□ -0.5
ERGIC3-218ENST00000489071 PIK3C2AO00443 1686 aa11.93□□□□□ -0.5
ERGIC3-218ENST00000489071 MKRN4PQ13434 485 aaPredicted RBP11.92□□□□□ -0.5
ERGIC3-218ENST00000489071 TOM1L2Q6ZVM7 507 aa11.92□□□□□ -0.5
ERGIC3-218ENST00000489071 COL18A1P39060 1754 aa11.92□□□□□ -0.5
ERGIC3-218ENST00000489071 USP47Q96K76 1375 aa11.92□□□□□ -0.5
ERGIC3-218ENST00000489071 SPDYE4A6NLX3 237 aa11.91□□□□□ -0.5
ERGIC3-218ENST00000489071 DDB1Q16531 1140 aa11.91□□□□□ -0.5
ERGIC3-218ENST00000489071 NBPF14Q5TI25 921 aa11.91□□□□□ -0.5
ERGIC3-218ENST00000489071 CDCA7Q9BWT1 371 aaPredicted RBP11.91□□□□□ -0.5
ERGIC3-218ENST00000489071 RTN4Q9NQC3 1192 aaKnown RBP11.91□□□□□ -0.5
ERGIC3-218ENST00000489071 SBNO2Q9Y2G9 1366 aa11.91□□□□□ -0.5
ERGIC3-218ENST00000489071 WDR17Q8IZU2 1322 aa11.9□□□□□ -0.5
ERGIC3-218ENST00000489071 RGPD5Q99666 1765 aa11.9□□□□□ -0.5
ERGIC3-218ENST00000489071 OVOS2A0A0G2JMS6 1433 aa11.9□□□□□ -0.5
ERGIC3-218ENST00000489071 OVOS2A0A0J9YW53 1432 aa11.9□□□□□ -0.5
ERGIC3-218ENST00000489071 HSPA5P11021 654 aaKnown RBP11.9□□□□□ -0.5
ERGIC3-218ENST00000489071 CPSF1Q10570 1443 aaKnown RBP11.9□□□□□ -0.5
ERGIC3-218ENST00000489071 OVOS2Q6IE36 1432 aa11.9□□□□□ -0.5
ERGIC3-218ENST00000489071 ARHGEF25Q86VW2 580 aa11.9□□□□□ -0.5
ERGIC3-218ENST00000489071 SBF2Q86WG5 1849 aa11.9□□□□□ -0.5
ERGIC3-218ENST00000489071 RREB1Q92766 1687 aa11.9□□□□□ -0.5
ERGIC3-218ENST00000489071 KTN1Q86UP2 1357 aaKnown RBP11.9□□□□□ -0.5
ERGIC3-218ENST00000489071 AXIN2Q9Y2T1 843 aa11.89□□□□□ -0.51
ERGIC3-218ENST00000489071 CSB-PGBD3P0DP91 1061 aa11.88□□□□□ -0.51
ERGIC3-218ENST00000489071 CARD10Q9BWT7 1032 aa11.88□□□□□ -0.51
ERGIC3-218ENST00000489071 NUP188Q5SRE5 1749 aa11.88□□□□□ -0.51
ERGIC3-218ENST00000489071 MON2Q7Z3U7 1717 aa11.88□□□□□ -0.51
ERGIC3-218ENST00000489071 WNK3Q9BYP7 1800 aa11.88□□□□□ -0.51
ERGIC3-218ENST00000489071 KAT6BQ8WYB5 2073 aa11.87□□□□□ -0.51
ERGIC3-218ENST00000489071 LRRC37A3O60309 1634 aa11.87□□□□□ -0.51
ERGIC3-218ENST00000489071 PEAK1Q9H792 1746 aa11.87□□□□□ -0.51
ERGIC3-218ENST00000489071 PLSCR1O15162 318 aa11.87□□□□□ -0.51
ERGIC3-218ENST00000489071 SOX12O15370 315 aa11.87□□□□□ -0.51
ERGIC3-218ENST00000489071 ZBTB12Q9Y330 459 aaPredicted RBP11.87□□□□□ -0.51
ERGIC3-218ENST00000489071 SRCAPQ6ZRS2 3230 aa11.87□□□□□ -0.51
ERGIC3-218ENST00000489071 HDGFL2Q7Z4V5 671 aaPredicted RBP11.86□□□□□ -0.51
ERGIC3-218ENST00000489071 TMC1Q8TDI8 760 aa11.86□□□□□ -0.51
ERGIC3-218ENST00000489071 BCL11BQ9C0K0 894 aaPredicted RBP11.86□□□□□ -0.51
ERGIC3-218ENST00000489071 USP31Q70CQ4 1352 aa11.86□□□□□ -0.51
ERGIC3-218ENST00000489071 RGPD3A6NKT7 1758 aaPredicted RBP11.86□□□□□ -0.51
ERGIC3-218ENST00000489071 RGPD4Q7Z3J3 1758 aa11.86□□□□□ -0.51
ERGIC3-218ENST00000489071 ABCC6O95255 1503 aa11.86□□□□□ -0.51
ERGIC3-218ENST00000489071 CCDC7Q96M83 1385 aa11.85□□□□□ -0.51
ERGIC3-218ENST00000489071 EXOC5O00471 708 aa11.85□□□□□ -0.51
ERGIC3-218ENST00000489071 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.85□□□□□ -0.51
ERGIC3-218ENST00000489071 PUS7Q96PZ0 661 aaKnown RBP11.85□□□□□ -0.51
ERGIC3-218ENST00000489071 NFAT5O94916 1531 aa11.85□□□□□ -0.51
ERGIC3-218ENST00000489071 BCL9O00512 1426 aa11.85□□□□□ -0.51
ERGIC3-218ENST00000489071 DIEXFQ68CQ4 756 aaKnown RBP11.84□□□□□ -0.51
ERGIC3-218ENST00000489071 MARCH10Q8NA82 808 aaPredicted RBP11.84□□□□□ -0.51
ERGIC3-218ENST00000489071 TERF2IPQ9NYB0 399 aa11.84□□□□□ -0.51
ERGIC3-218ENST00000489071 USP54Q70EL1 1684 aa11.84□□□□□ -0.51
ERGIC3-218ENST00000489071 ST20-MTHFSA0A0A6YYL1 179 aa11.83□□□□□ -0.52
ERGIC3-218ENST00000489071 CDCA8Q53HL2 280 aa11.83□□□□□ -0.52
ERGIC3-218ENST00000489071 SLC12A5Q9H2X9 1139 aa11.83□□□□□ -0.52
ERGIC3-218ENST00000489071 LTN1O94822 1766 aa11.82□□□□□ -0.52
ERGIC3-218ENST00000489071 ABCB7O75027 752 aa11.82□□□□□ -0.52
ERGIC3-218ENST00000489071 NME9Q86XW9 330 aa11.82□□□□□ -0.52
ERGIC3-218ENST00000489071 SPON1Q9HCB6 807 aa11.82□□□□□ -0.52
ERGIC3-218ENST00000489071 FBXO3Q9UK99 471 aa11.82□□□□□ -0.52
ERGIC3-218ENST00000489071 EDC4Q6P2E9 1401 aaKnown RBP11.82□□□□□ -0.52
ERGIC3-218ENST00000489071 CD163L1Q9NR16 1453 aa11.82□□□□□ -0.52
ERGIC3-218ENST00000489071 ERBB3P21860 1342 aa11.81□□□□□ -0.52
ERGIC3-218ENST00000489071 KCNQ2O43526 872 aa11.8□□□□□ -0.52
ERGIC3-218ENST00000489071 TMF1P82094 1093 aa11.8□□□□□ -0.52
ERGIC3-218ENST00000489071 TESK2Q96S53 571 aa11.8□□□□□ -0.52
ERGIC3-218ENST00000489071 NLRP2Q9NX02 1062 aa11.8□□□□□ -0.52
ERGIC3-218ENST00000489071 PPP1R1BQ9UD71 204 aaPredicted RBP11.8□□□□□ -0.52
ERGIC3-218ENST00000489071 WASHC2AQ641Q2 1341 aa11.8□□□□□ -0.52
ERGIC3-218ENST00000489071 NINLQ9Y2I6 1382 aa11.79□□□□□ -0.52
ERGIC3-218ENST00000489071 TNS2Q63HR2 1409 aa11.79□□□□□ -0.52
ERGIC3-218ENST00000489071 IL2RBP14784 551 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms