RNA–Protein interactions for RNA: ENST00000488839.1

SFXN5-219, Transcript of sideroflexin 5, humanhuman

TSL 3

Gene SFXN5, Length 671 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-219ENST00000488839 SPATA31A7Q8IWB4 1347 aa17.41■□□□□ 0.38
SFXN5-219ENST00000488839 NINLQ9Y2I6 1382 aa17.4■□□□□ 0.38
SFXN5-219ENST00000488839 ST20-MTHFSA0A0A6YYL1 179 aa17.4■□□□□ 0.38
SFXN5-219ENST00000488839 KCNH5Q8NCM2 988 aa17.4■□□□□ 0.38
SFXN5-219ENST00000488839 TESK2Q96S53 571 aa17.4■□□□□ 0.38
SFXN5-219ENST00000488839 AKAP12Q02952 1782 aa17.4■□□□□ 0.38
SFXN5-219ENST00000488839 NRKQ7Z2Y5 1582 aa17.4■□□□□ 0.38
SFXN5-219ENST00000488839 KTN1Q86UP2 1357 aaKnown RBP17.4■□□□□ 0.38
SFXN5-219ENST00000488839 HDGFL2Q7Z4V5 671 aaPredicted RBP17.39■□□□□ 0.37
SFXN5-219ENST00000488839 SLIT3O75094 1523 aa17.38■□□□□ 0.37
SFXN5-219ENST00000488839 EVA1CP58658 441 aa17.38■□□□□ 0.37
SFXN5-219ENST00000488839 TERF2IPQ9NYB0 399 aa17.38■□□□□ 0.37
SFXN5-219ENST00000488839 CHRNA2Q15822 529 aa17.37■□□□□ 0.37
SFXN5-219ENST00000488839 KRT27Q7Z3Y8 459 aa17.36■□□□□ 0.37
SFXN5-219ENST00000488839 TMC1Q8TDI8 760 aa17.36■□□□□ 0.37
SFXN5-219ENST00000488839 SPATA31A1Q5TZJ5 1347 aa17.36■□□□□ 0.37
SFXN5-219ENST00000488839 AATKQ6ZMQ8 1374 aa17.36■□□□□ 0.37
SFXN5-219ENST00000488839 USP31Q70CQ4 1352 aa17.36■□□□□ 0.37
SFXN5-219ENST00000488839 TMF1P82094 1093 aa17.35■□□□□ 0.37
SFXN5-219ENST00000488839 FAM98CQ17RN3 349 aaKnown RBP17.35■□□□□ 0.37
SFXN5-219ENST00000488839 CDCA8Q53HL2 280 aa17.35■□□□□ 0.37
SFXN5-219ENST00000488839 THRAP3Q9Y2W1 955 aaKnown RBP17.35■□□□□ 0.37
SFXN5-219ENST00000488839 PIK3C2AO00443 1686 aa17.35■□□□□ 0.37
SFXN5-219ENST00000488839 BARGINQ6ZT62 677 aa17.34■□□□□ 0.37
SFXN5-219ENST00000488839 MON2Q7Z3U7 1717 aa17.34■□□□□ 0.37
SFXN5-219ENST00000488839 LMO7Q8WWI1 1683 aa17.34■□□□□ 0.37
SFXN5-219ENST00000488839 USP47Q96K76 1375 aa17.34■□□□□ 0.37
SFXN5-219ENST00000488839 SLC12A5Q9H2X9 1139 aa17.34■□□□□ 0.37
SFXN5-219ENST00000488839 CD163L1Q9NR16 1453 aa17.34■□□□□ 0.37
SFXN5-219ENST00000488839 CAMTA1Q9Y6Y1 1673 aa17.33■□□□□ 0.37
SFXN5-219ENST00000488839 EDC4Q6P2E9 1401 aaKnown RBP17.33■□□□□ 0.36
SFXN5-219ENST00000488839 STRN4Q9NRL3 753 aa17.33■□□□□ 0.36
SFXN5-219ENST00000488839 BLMP54132 1417 aaPredicted RBP17.32■□□□□ 0.36
SFXN5-219ENST00000488839 ARHGEF25Q86VW2 580 aa17.32■□□□□ 0.36
SFXN5-219ENST00000488839 CCER1Q8TC90 406 aaPredicted RBP17.32■□□□□ 0.36
SFXN5-219ENST00000488839 BRWD3Q6RI45 1802 aa17.31■□□□□ 0.36
SFXN5-219ENST00000488839 A0A0G2JS52 829 aa17.31■□□□□ 0.36
SFXN5-219ENST00000488839 MYT1Q01538 1121 aa17.31■□□□□ 0.36
SFXN5-219ENST00000488839 COL5A2P05997 1499 aaPredicted RBP17.31■□□□□ 0.36
SFXN5-219ENST00000488839 TCP11L2Q8N4U5 519 aa17.3■□□□□ 0.36
SFXN5-219ENST00000488839 USP54Q70EL1 1684 aa17.29■□□□□ 0.36
SFXN5-219ENST00000488839 THSD7AQ9UPZ6 1657 aa17.29■□□□□ 0.36
SFXN5-219ENST00000488839 A0A1W2PP64 1363 aa17.29■□□□□ 0.36
SFXN5-219ENST00000488839 SF3B2Q13435 895 aaKnown RBP17.29■□□□□ 0.36
SFXN5-219ENST00000488839 LARP1Q6PKG0 1096 aaKnown RBP17.29■□□□□ 0.36
SFXN5-219ENST00000488839 ABCC6O95255 1503 aa17.29■□□□□ 0.36
SFXN5-219ENST00000488839 C11orf95C9JLR9 678 aaPredicted RBP17.28■□□□□ 0.36
SFXN5-219ENST00000488839 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.28■□□□□ 0.36
SFXN5-219ENST00000488839 CRB1P82279 1406 aa17.28■□□□□ 0.36
SFXN5-219ENST00000488839 ANKRD36BQ8N2N9 1353 aa17.27■□□□□ 0.35
SFXN5-219ENST00000488839 COL18A1P39060 1754 aa17.26■□□□□ 0.35
SFXN5-219ENST00000488839 GABBR2O75899 941 aa17.26■□□□□ 0.35
SFXN5-219ENST00000488839 CDCA7Q9BWT1 371 aaPredicted RBP17.26■□□□□ 0.35
SFXN5-219ENST00000488839 NFAT5O94916 1531 aa17.26■□□□□ 0.35
SFXN5-219ENST00000488839 WDR17Q8IZU2 1322 aa17.25■□□□□ 0.35
SFXN5-219ENST00000488839 FAM196AQ6ZSG2 479 aa17.25■□□□□ 0.35
SFXN5-219ENST00000488839 NME9Q86XW9 330 aa17.25■□□□□ 0.35
SFXN5-219ENST00000488839 USP35Q9P2H5 1018 aa17.25■□□□□ 0.35
SFXN5-219ENST00000488839 PDE3BQ13370 1112 aa17.24■□□□□ 0.35
SFXN5-219ENST00000488839 AXIN2Q9Y2T1 843 aa17.24■□□□□ 0.35
SFXN5-219ENST00000488839 ZBTB7CA1YPR0 619 aa17.23■□□□□ 0.35
SFXN5-219ENST00000488839 TOM1L2Q6ZVM7 507 aa17.23■□□□□ 0.35
SFXN5-219ENST00000488839 OVOS2A0A0J9YW53 1432 aa17.22■□□□□ 0.35
SFXN5-219ENST00000488839 OVOS2Q6IE36 1432 aa17.22■□□□□ 0.35
SFXN5-219ENST00000488839 CARD10Q9BWT7 1032 aa17.22■□□□□ 0.35
SFXN5-219ENST00000488839 BAG6P46379 1132 aa17.21■□□□□ 0.35
SFXN5-219ENST00000488839 COG3Q96JB2 828 aa17.21■□□□□ 0.35
SFXN5-219ENST00000488839 ZRANB1Q9UGI0 708 aa17.21■□□□□ 0.35
SFXN5-219ENST00000488839 EP400Q96L91 3159 aa17.21■□□□□ 0.35
SFXN5-219ENST00000488839 CCDC7Q96M83 1385 aa17.2■□□□□ 0.34
SFXN5-219ENST00000488839 EIF4G2P78344 907 aaKnown RBP eCLIP17.2■□□□□ 0.34
SFXN5-219ENST00000488839 CHADLQ6NUI6 762 aa17.2■□□□□ 0.34
SFXN5-219ENST00000488839 SOX12O15370 315 aa17.19■□□□□ 0.34
SFXN5-219ENST00000488839 CSB-PGBD3P0DP91 1061 aa17.19■□□□□ 0.34
SFXN5-219ENST00000488839 PARP4Q9UKK3 1724 aaKnown RBP17.18■□□□□ 0.34
SFXN5-219ENST00000488839 PRR29P0C7W0 189 aa17.18■□□□□ 0.34
SFXN5-219ENST00000488839 DISP2A7MBM2 1401 aa17.18■□□□□ 0.34
SFXN5-219ENST00000488839 RGPD1P0DJD0 1748 aa17.17■□□□□ 0.34
SFXN5-219ENST00000488839 DDB1Q16531 1140 aa17.17■□□□□ 0.34
SFXN5-219ENST00000488839 ERBB3P21860 1342 aa17.17■□□□□ 0.34
SFXN5-219ENST00000488839 FYB1O15117 783 aa17.16■□□□□ 0.34
SFXN5-219ENST00000488839 IP6K1Q92551 441 aa17.16■□□□□ 0.34
SFXN5-219ENST00000488839 DEFB132Q7Z7B7 95 aa17.15■□□□□ 0.34
SFXN5-219ENST00000488839 FAM182BQ5T319 152 aa17.14■□□□□ 0.33
SFXN5-219ENST00000488839 RGPD5Q99666 1765 aa17.14■□□□□ 0.33
SFXN5-219ENST00000488839 PARD3Q8TEW0 1356 aa17.14■□□□□ 0.33
SFXN5-219ENST00000488839 BCL9O00512 1426 aa17.13■□□□□ 0.33
SFXN5-219ENST00000488839 LTN1O94822 1766 aa17.13■□□□□ 0.33
SFXN5-219ENST00000488839 EXOC5O00471 708 aa17.13■□□□□ 0.33
SFXN5-219ENST00000488839 LHX8Q68G74 356 aa17.13■□□□□ 0.33
SFXN5-219ENST00000488839 OVOS2A0A0G2JMS6 1433 aa17.13■□□□□ 0.33
SFXN5-219ENST00000488839 ANKRD24Q8TF21 1146 aa17.12■□□□□ 0.33
SFXN5-219ENST00000488839 RTL1A6NKG5 1358 aa17.12■□□□□ 0.33
SFXN5-219ENST00000488839 KIF24Q5T7B8 1368 aa17.12■□□□□ 0.33
SFXN5-219ENST00000488839 TRIM37O94972 964 aa17.11■□□□□ 0.33
SFXN5-219ENST00000488839 HSPA5P11021 654 aaKnown RBP17.11■□□□□ 0.33
SFXN5-219ENST00000488839 NLRP2Q9NX02 1062 aa17.11■□□□□ 0.33
SFXN5-219ENST00000488839 AMPHP49418 695 aa17.1■□□□□ 0.33
SFXN5-219ENST00000488839 CARD14Q9BXL6 1004 aa17.1■□□□□ 0.33
SFXN5-219ENST00000488839 MAP3K19Q56UN5 1328 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 680.4 ms