RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-208ENST00000488571 PDE3BQ13370 1112 aa16.5■□□□□ 0.23
SNU13-208ENST00000488571 CENPJQ9HC77 1338 aaPredicted RBP16.49■□□□□ 0.23
SNU13-208ENST00000488571 SRPK2P78362 688 aaKnown RBP16.49■□□□□ 0.23
SNU13-208ENST00000488571 NLRP13Q86W25 1043 aa16.49■□□□□ 0.23
SNU13-208ENST00000488571 CABP2Q9NPB3 220 aa16.49■□□□□ 0.23
SNU13-208ENST00000488571 PEAK1Q9H792 1746 aa16.48■□□□□ 0.23
SNU13-208ENST00000488571 THRAP3Q9Y2W1 955 aaKnown RBP16.48■□□□□ 0.23
SNU13-208ENST00000488571 USP6P35125 1406 aa16.47■□□□□ 0.23
SNU13-208ENST00000488571 SLIT3O75094 1523 aa16.47■□□□□ 0.23
SNU13-208ENST00000488571 BRD4O60885 1362 aaPredicted RBP16.47■□□□□ 0.23
SNU13-208ENST00000488571 CRB1P82279 1406 aa16.46■□□□□ 0.23
SNU13-208ENST00000488571 LRRC37A3O60309 1634 aa16.46■□□□□ 0.23
SNU13-208ENST00000488571 PIK3C2AO00443 1686 aa16.46■□□□□ 0.23
SNU13-208ENST00000488571 COL18A1P39060 1754 aa16.46■□□□□ 0.22
SNU13-208ENST00000488571 CABP1Q9NZU7 370 aa16.45■□□□□ 0.22
SNU13-208ENST00000488571 SBF2Q86WG5 1849 aa16.45■□□□□ 0.22
SNU13-208ENST00000488571 AATKQ6ZMQ8 1374 aa16.44■□□□□ 0.22
SNU13-208ENST00000488571 REM2Q8IYK8 340 aaPredicted RBP16.44■□□□□ 0.22
SNU13-208ENST00000488571 WNK3Q9BYP7 1800 aa16.43■□□□□ 0.22
SNU13-208ENST00000488571 RGPD3A6NKT7 1758 aaPredicted RBP16.43■□□□□ 0.22
SNU13-208ENST00000488571 RGPD4Q7Z3J3 1758 aa16.43■□□□□ 0.22
SNU13-208ENST00000488571 NLRP6P59044 892 aa16.42■□□□□ 0.22
SNU13-208ENST00000488571 OVOS2A0A0G2JMS6 1433 aa16.42■□□□□ 0.22
SNU13-208ENST00000488571 OVOS2A0A0J9YW53 1432 aa16.42■□□□□ 0.22
SNU13-208ENST00000488571 OVOS2Q6IE36 1432 aa16.42■□□□□ 0.22
SNU13-208ENST00000488571 TRPM1Q7Z4N2 1603 aa16.41■□□□□ 0.22
SNU13-208ENST00000488571 NBPF14Q5TI25 921 aa16.41■□□□□ 0.22
SNU13-208ENST00000488571 ZBTB7CA1YPR0 619 aa16.4■□□□□ 0.22
SNU13-208ENST00000488571 AXIN2Q9Y2T1 843 aa16.4■□□□□ 0.22
SNU13-208ENST00000488571 AKAP12Q02952 1782 aa16.4■□□□□ 0.22
SNU13-208ENST00000488571 RGPD5Q99666 1765 aa16.39■□□□□ 0.21
SNU13-208ENST00000488571 C11orf95C9JLR9 678 aaPredicted RBP16.39■□□□□ 0.21
SNU13-208ENST00000488571 L3MBTL2Q969R5 705 aa16.39■□□□□ 0.21
SNU13-208ENST00000488571 CPSF1Q10570 1443 aaKnown RBP16.38■□□□□ 0.21
SNU13-208ENST00000488571 MKRN4PQ13434 485 aaPredicted RBP16.38■□□□□ 0.21
SNU13-208ENST00000488571 PTF1AQ7RTS3 328 aa16.38■□□□□ 0.21
SNU13-208ENST00000488571 DDB1Q16531 1140 aa16.37■□□□□ 0.21
SNU13-208ENST00000488571 TOM1L2Q6ZVM7 507 aa16.37■□□□□ 0.21
SNU13-208ENST00000488571 WDR17Q8IZU2 1322 aa16.37■□□□□ 0.21
SNU13-208ENST00000488571 CASZ1Q86V15 1759 aa16.36■□□□□ 0.21
SNU13-208ENST00000488571 PLSCR1O15162 318 aa16.36■□□□□ 0.21
SNU13-208ENST00000488571 TTC21BQ7Z4L5 1316 aa16.36■□□□□ 0.21
SNU13-208ENST00000488571 EVC2Q86UK5 1308 aa16.36■□□□□ 0.21
SNU13-208ENST00000488571 NFAT5O94916 1531 aa16.35■□□□□ 0.21
SNU13-208ENST00000488571 SPDYE2BA6NHP3 402 aa16.35■□□□□ 0.21
SNU13-208ENST00000488571 KCNQ2O43526 872 aa16.35■□□□□ 0.21
SNU13-208ENST00000488571 SPDYE6P0CI01 402 aa16.35■□□□□ 0.21
SNU13-208ENST00000488571 SPDYE2Q495Y8 402 aa16.35■□□□□ 0.21
SNU13-208ENST00000488571 ARHGEF25Q86VW2 580 aa16.35■□□□□ 0.21
SNU13-208ENST00000488571 MARCH10Q8NA82 808 aaPredicted RBP16.35■□□□□ 0.21
SNU13-208ENST00000488571 SPON1Q9HCB6 807 aa16.35■□□□□ 0.21
SNU13-208ENST00000488571 ANO8Q9HCE9 1232 aaPredicted RBP16.35■□□□□ 0.21
SNU13-208ENST00000488571 BCL9O00512 1426 aa16.35■□□□□ 0.21
SNU13-208ENST00000488571 BCL11BQ9C0K0 894 aaPredicted RBP16.34■□□□□ 0.21
SNU13-208ENST00000488571 PROM2Q8N271 834 aa16.33■□□□□ 0.2
SNU13-208ENST00000488571 ZNF692Q9BU19 519 aaPredicted RBP16.33■□□□□ 0.2
SNU13-208ENST00000488571 MON2Q7Z3U7 1717 aa16.32■□□□□ 0.2
SNU13-208ENST00000488571 SIN3AQ96ST3 1273 aa16.32■□□□□ 0.2
SNU13-208ENST00000488571 ROCK2O75116 1388 aaKnown RBP16.31■□□□□ 0.2
SNU13-208ENST00000488571 TTC21AQ8NDW8 1320 aa16.31■□□□□ 0.2
SNU13-208ENST00000488571 KCNH5Q8NCM2 988 aa16.31■□□□□ 0.2
SNU13-208ENST00000488571 CDCA7Q9BWT1 371 aaPredicted RBP16.31■□□□□ 0.2
SNU13-208ENST00000488571 CARD10Q9BWT7 1032 aa16.31■□□□□ 0.2
SNU13-208ENST00000488571 PPP1R1BQ9UD71 204 aaPredicted RBP16.31■□□□□ 0.2
SNU13-208ENST00000488571 USP54Q70EL1 1684 aa16.3■□□□□ 0.2
SNU13-208ENST00000488571 ABCC6O95255 1503 aa16.3■□□□□ 0.2
SNU13-208ENST00000488571 NINLQ9Y2I6 1382 aa16.3■□□□□ 0.2
SNU13-208ENST00000488571 SOX12O15370 315 aa16.3■□□□□ 0.2
SNU13-208ENST00000488571 PDGFDQ9GZP0 370 aaPredicted RBP16.3■□□□□ 0.2
SNU13-208ENST00000488571 YY1P25490 414 aa16.29■□□□□ 0.2
SNU13-208ENST00000488571 KTN1Q86UP2 1357 aaKnown RBP16.28■□□□□ 0.2
SNU13-208ENST00000488571 CSB-PGBD3P0DP91 1061 aa16.28■□□□□ 0.2
SNU13-208ENST00000488571 TNS2Q63HR2 1409 aa16.28■□□□□ 0.2
SNU13-208ENST00000488571 MYOM1P52179 1685 aa16.27■□□□□ 0.2
SNU13-208ENST00000488571 CD163L1Q9NR16 1453 aa16.27■□□□□ 0.19
SNU13-208ENST00000488571 NHSQ6T4R5 1651 aa16.27■□□□□ 0.19
SNU13-208ENST00000488571 CCDC7Q96M83 1385 aa16.26■□□□□ 0.19
SNU13-208ENST00000488571 LTN1O94822 1766 aa16.26■□□□□ 0.19
SNU13-208ENST00000488571 USP31Q70CQ4 1352 aa16.26■□□□□ 0.19
SNU13-208ENST00000488571 SBNO2Q9Y2G9 1366 aa16.26■□□□□ 0.19
SNU13-208ENST00000488571 EXOC5O00471 708 aa16.25■□□□□ 0.19
SNU13-208ENST00000488571 NEUROD1Q13562 356 aa16.25■□□□□ 0.19
SNU13-208ENST00000488571 TXNRD1Q16881 649 aa16.25■□□□□ 0.19
SNU13-208ENST00000488571 PITPNM1O00562 1244 aa16.24■□□□□ 0.19
SNU13-208ENST00000488571 ZBTB7AO95365 584 aa16.24■□□□□ 0.19
SNU13-208ENST00000488571 PTGER2P43116 358 aa16.24■□□□□ 0.19
SNU13-208ENST00000488571 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.23■□□□□ 0.19
SNU13-208ENST00000488571 ERBB3P21860 1342 aa16.22■□□□□ 0.19
SNU13-208ENST00000488571 SLC15A2Q16348 729 aa16.22■□□□□ 0.19
SNU13-208ENST00000488571 NME9Q86XW9 330 aa16.22■□□□□ 0.19
SNU13-208ENST00000488571 PAPPAQ13219 1627 aa16.22■□□□□ 0.19
SNU13-208ENST00000488571 STK32BQ9NY57 414 aa16.21■□□□□ 0.19
SNU13-208ENST00000488571 BTAF1O14981 1849 aa16.2■□□□□ 0.18
SNU13-208ENST00000488571 ACSBG1Q96GR2 724 aa16.19■□□□□ 0.18
SNU13-208ENST00000488571 SGIP1Q9BQI5 828 aa16.19■□□□□ 0.18
SNU13-208ENST00000488571 NLRP2Q9NX02 1062 aa16.19■□□□□ 0.18
SNU13-208ENST00000488571 IL2RBP14784 551 aa16.18■□□□□ 0.18
SNU13-208ENST00000488571 EDC4Q6P2E9 1401 aaKnown RBP16.18■□□□□ 0.18
SNU13-208ENST00000488571 UTRNP46939 3433 aa16.17■□□□□ 0.18
SNU13-208ENST00000488571 PIP4P2Q8N4L2 257 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms