RNA–Protein interactions for RNA: ENST00000488344.6

VAMP7-206, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 2

Gene VAMP7, Length 696 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-206ENST00000488344 TONSLQ96HA7 1378 aa15.96■□□□□ 0.15
VAMP7-206ENST00000488344 CPSF1Q10570 1443 aaKnown RBP15.95■□□□□ 0.14
VAMP7-206ENST00000488344 LRP5O75197 1615 aa15.95■□□□□ 0.14
VAMP7-206ENST00000488344 PSDA5PKW4 1024 aaPredicted RBP15.95■□□□□ 0.14
VAMP7-206ENST00000488344 TOM1L2Q6ZVM7 507 aa15.95■□□□□ 0.14
VAMP7-206ENST00000488344 CAMKK2Q96RR4 588 aa15.95■□□□□ 0.14
VAMP7-206ENST00000488344 CDCA7Q9BWT1 371 aaPredicted RBP15.95■□□□□ 0.14
VAMP7-206ENST00000488344 KTN1Q86UP2 1357 aaKnown RBP15.95■□□□□ 0.14
VAMP7-206ENST00000488344 WDR17Q8IZU2 1322 aa15.94■□□□□ 0.14
VAMP7-206ENST00000488344 EZH2Q15910 746 aaKnown RBP15.94■□□□□ 0.14
VAMP7-206ENST00000488344 TNS1Q9HBL0 1735 aaKnown RBP15.94■□□□□ 0.14
VAMP7-206ENST00000488344 OVOS2A0A0G2JMS6 1433 aa15.94■□□□□ 0.14
VAMP7-206ENST00000488344 OVOS2A0A0J9YW53 1432 aa15.94■□□□□ 0.14
VAMP7-206ENST00000488344 OVOS2Q6IE36 1432 aa15.94■□□□□ 0.14
VAMP7-206ENST00000488344 R3HDM1Q15032 1099 aaKnown RBP15.93■□□□□ 0.14
VAMP7-206ENST00000488344 ARHGEF25Q86VW2 580 aa15.93■□□□□ 0.14
VAMP7-206ENST00000488344 PIK3C2AO00443 1686 aa15.92■□□□□ 0.14
VAMP7-206ENST00000488344 SLC24A1O60721 1099 aa15.92■□□□□ 0.14
VAMP7-206ENST00000488344 CSB-PGBD3P0DP91 1061 aa15.92■□□□□ 0.14
VAMP7-206ENST00000488344 DDB1Q16531 1140 aa15.92■□□□□ 0.14
VAMP7-206ENST00000488344 NBPF14Q5TI25 921 aa15.92■□□□□ 0.14
VAMP7-206ENST00000488344 HDGFL2Q7Z4V5 671 aaPredicted RBP15.92■□□□□ 0.14
VAMP7-206ENST00000488344 ABCC6O95255 1503 aa15.91■□□□□ 0.14
VAMP7-206ENST00000488344 PARP4Q9UKK3 1724 aaKnown RBP15.91■□□□□ 0.14
VAMP7-206ENST00000488344 PUS7Q96PZ0 661 aaKnown RBP15.9■□□□□ 0.14
VAMP7-206ENST00000488344 SOX12O15370 315 aa15.89■□□□□ 0.13
VAMP7-206ENST00000488344 CARD10Q9BWT7 1032 aa15.89■□□□□ 0.13
VAMP7-206ENST00000488344 TERF2IPQ9NYB0 399 aa15.89■□□□□ 0.13
VAMP7-206ENST00000488344 USP31Q70CQ4 1352 aa15.88■□□□□ 0.13
VAMP7-206ENST00000488344 CCDC7Q96M83 1385 aa15.88■□□□□ 0.13
VAMP7-206ENST00000488344 DSG3P32926 999 aa15.88■□□□□ 0.13
VAMP7-206ENST00000488344 TMC1Q8TDI8 760 aa15.88■□□□□ 0.13
VAMP7-206ENST00000488344 AXIN2Q9Y2T1 843 aa15.88■□□□□ 0.13
VAMP7-206ENST00000488344 NINLQ9Y2I6 1382 aa15.87■□□□□ 0.13
VAMP7-206ENST00000488344 EDC4Q6P2E9 1401 aaKnown RBP15.87■□□□□ 0.13
VAMP7-206ENST00000488344 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.87■□□□□ 0.13
VAMP7-206ENST00000488344 NFAT5O94916 1531 aa15.87■□□□□ 0.13
VAMP7-206ENST00000488344 AKAP12Q02952 1782 aa15.87■□□□□ 0.13
VAMP7-206ENST00000488344 BCL9O00512 1426 aa15.86■□□□□ 0.13
VAMP7-206ENST00000488344 BCL11BQ9C0K0 894 aaPredicted RBP15.85■□□□□ 0.13
VAMP7-206ENST00000488344 SPINK5Q9NQ38 1064 aaPredicted RBP15.85■□□□□ 0.13
VAMP7-206ENST00000488344 LRRC37A3O60309 1634 aa15.85■□□□□ 0.13
VAMP7-206ENST00000488344 EXOC5O00471 708 aa15.84■□□□□ 0.13
VAMP7-206ENST00000488344 PLSCR1O15162 318 aa15.84■□□□□ 0.13
VAMP7-206ENST00000488344 U3KPZ7 1027 aaPredicted RBP15.84■□□□□ 0.13
VAMP7-206ENST00000488344 COL18A1P39060 1754 aa15.84■□□□□ 0.13
VAMP7-206ENST00000488344 RREB1Q92766 1687 aa15.83■□□□□ 0.13
VAMP7-206ENST00000488344 MON2Q7Z3U7 1717 aa15.83■□□□□ 0.13
VAMP7-206ENST00000488344 CD163L1Q9NR16 1453 aa15.83■□□□□ 0.12
VAMP7-206ENST00000488344 NME9Q86XW9 330 aa15.82■□□□□ 0.12
VAMP7-206ENST00000488344 SLC12A5Q9H2X9 1139 aa15.82■□□□□ 0.12
VAMP7-206ENST00000488344 ERBB3P21860 1342 aa15.82■□□□□ 0.12
VAMP7-206ENST00000488344 A0A1W2PP64 1363 aa15.81■□□□□ 0.12
VAMP7-206ENST00000488344 TRIM26Q12899 539 aaPredicted RBP15.81■□□□□ 0.12
VAMP7-206ENST00000488344 TNS2Q63HR2 1409 aa15.81■□□□□ 0.12
VAMP7-206ENST00000488344 MARCH10Q8NA82 808 aaPredicted RBP15.81■□□□□ 0.12
VAMP7-206ENST00000488344 PEAK1Q9H792 1746 aa15.81■□□□□ 0.12
VAMP7-206ENST00000488344 USP54Q70EL1 1684 aa15.8■□□□□ 0.12
VAMP7-206ENST00000488344 CAPN15O75808 1086 aa15.8■□□□□ 0.12
VAMP7-206ENST00000488344 NLRP2Q9NX02 1062 aa15.8■□□□□ 0.12
VAMP7-206ENST00000488344 SPON1Q9HCB6 807 aa15.79■□□□□ 0.12
VAMP7-206ENST00000488344 RGPD3A6NKT7 1758 aaPredicted RBP15.79■□□□□ 0.12
VAMP7-206ENST00000488344 RGPD4Q7Z3J3 1758 aa15.79■□□□□ 0.12
VAMP7-206ENST00000488344 NUP188Q5SRE5 1749 aa15.79■□□□□ 0.12
VAMP7-206ENST00000488344 ST20-MTHFSA0A0A6YYL1 179 aa15.78■□□□□ 0.12
VAMP7-206ENST00000488344 IL2RBP14784 551 aa15.78■□□□□ 0.12
VAMP7-206ENST00000488344 WNK3Q9BYP7 1800 aa15.78■□□□□ 0.12
VAMP7-206ENST00000488344 ANKRD24Q8TF21 1146 aa15.77■□□□□ 0.12
VAMP7-206ENST00000488344 COG3Q96JB2 828 aa15.77■□□□□ 0.12
VAMP7-206ENST00000488344 TESK2Q96S53 571 aa15.77■□□□□ 0.12
VAMP7-206ENST00000488344 PPP1R1BQ9UD71 204 aaPredicted RBP15.77■□□□□ 0.12
VAMP7-206ENST00000488344 KCNQ2O43526 872 aa15.76■□□□□ 0.11
VAMP7-206ENST00000488344 TMF1P82094 1093 aa15.75■□□□□ 0.11
VAMP7-206ENST00000488344 CDCA8Q53HL2 280 aa15.75■□□□□ 0.11
VAMP7-206ENST00000488344 ANKRD36BQ8N2N9 1353 aa15.75■□□□□ 0.11
VAMP7-206ENST00000488344 IP6K1Q92551 441 aa15.74■□□□□ 0.11
VAMP7-206ENST00000488344 TXNRD1Q16881 649 aa15.73■□□□□ 0.11
VAMP7-206ENST00000488344 STK32BQ9NY57 414 aa15.73■□□□□ 0.11
VAMP7-206ENST00000488344 USP47Q96K76 1375 aa15.73■□□□□ 0.11
VAMP7-206ENST00000488344 ANO8Q9HCE9 1232 aaPredicted RBP15.72■□□□□ 0.11
VAMP7-206ENST00000488344 AMPHP49418 695 aa15.71■□□□□ 0.11
VAMP7-206ENST00000488344 RTL1A6NKG5 1358 aa15.71■□□□□ 0.11
VAMP7-206ENST00000488344 RGPD5Q99666 1765 aa15.7■□□□□ 0.1
VAMP7-206ENST00000488344 PTF1AQ7RTS3 328 aa15.7■□□□□ 0.1
VAMP7-206ENST00000488344 TIMELESSQ9UNS1 1208 aa15.7■□□□□ 0.1
VAMP7-206ENST00000488344 SBF2Q86WG5 1849 aa15.7■□□□□ 0.1
VAMP7-206ENST00000488344 MAP3K19Q56UN5 1328 aa15.69■□□□□ 0.1
VAMP7-206ENST00000488344 PROM2Q8N271 834 aa15.69■□□□□ 0.1
VAMP7-206ENST00000488344 LTN1O94822 1766 aa15.69■□□□□ 0.1
VAMP7-206ENST00000488344 NHSQ6T4R5 1651 aa15.68■□□□□ 0.1
VAMP7-206ENST00000488344 FAM208AQ9UK61 1670 aaKnown RBP15.68■□□□□ 0.1
VAMP7-206ENST00000488344 HOXC9P31274 260 aa15.68■□□□□ 0.1
VAMP7-206ENST00000488344 SLC15A2Q16348 729 aa15.68■□□□□ 0.1
VAMP7-206ENST00000488344 LTV1Q96GA3 475 aaPredicted RBP15.68■□□□□ 0.1
VAMP7-206ENST00000488344 ACSBG1Q96GR2 724 aa15.68■□□□□ 0.1
VAMP7-206ENST00000488344 SMG6Q86US8 1419 aaKnown RBP15.68■□□□□ 0.1
VAMP7-206ENST00000488344 CLSPNQ9HAW4 1339 aa15.68■□□□□ 0.1
VAMP7-206ENST00000488344 DDX54Q8TDD1 881 aaKnown RBP15.65■□□□□ 0.1
VAMP7-206ENST00000488344 CGNL1Q0VF96 1302 aa15.65■□□□□ 0.1
VAMP7-206ENST00000488344 KIF24Q5T7B8 1368 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms