RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 SPOCK3Q9BQ16 436 aa6.78□□□□□ -1.32
R3HDM1-219ENST00000488035 TBC1D2Q9BYX2 928 aa6.78□□□□□ -1.32
R3HDM1-219ENST00000488035 SPINT1O43278 529 aa6.77□□□□□ -1.33
R3HDM1-219ENST00000488035 ITGA6P23229 1130 aa6.77□□□□□ -1.33
R3HDM1-219ENST00000488035 GIGYF2Q6Y7W6 1299 aaKnown RBP6.77□□□□□ -1.33
R3HDM1-219ENST00000488035 PROCP04070 461 aa6.76□□□□□ -1.33
R3HDM1-219ENST00000488035 HRCP23327 699 aa6.76□□□□□ -1.33
R3HDM1-219ENST00000488035 FSHRP23945 695 aa6.76□□□□□ -1.33
R3HDM1-219ENST00000488035 NBPF14Q5TI25 921 aa6.76□□□□□ -1.33
R3HDM1-219ENST00000488035 VASH1Q7L8A9 365 aaPredicted RBP6.76□□□□□ -1.33
R3HDM1-219ENST00000488035 TRMT44Q8IYL2 757 aaKnown RBP6.76□□□□□ -1.33
R3HDM1-219ENST00000488035 SRSF11Q05519 484 aaKnown RBP6.75□□□□□ -1.33
R3HDM1-219ENST00000488035 Q6ZVU0 165 aa6.75□□□□□ -1.33
R3HDM1-219ENST00000488035 SV2AQ7L0J3 742 aa6.75□□□□□ -1.33
R3HDM1-219ENST00000488035 SH3RF1Q7Z6J0 888 aa6.75□□□□□ -1.33
R3HDM1-219ENST00000488035 CCDC116Q8IYX3 515 aa6.75□□□□□ -1.33
R3HDM1-219ENST00000488035 DCAF5Q96JK2 942 aa6.75□□□□□ -1.33
R3HDM1-219ENST00000488035 PCDHB15Q9Y5E8 787 aa6.75□□□□□ -1.33
R3HDM1-219ENST00000488035 ADAMTS2O95450 1211 aa6.74□□□□□ -1.33
R3HDM1-219ENST00000488035 LYPD4Q6UWN0 246 aa6.74□□□□□ -1.33
R3HDM1-219ENST00000488035 VWA5B2Q8N398 1253 aa6.74□□□□□ -1.33
R3HDM1-219ENST00000488035 PSMG3-AS1Q96PY0 264 aa6.74□□□□□ -1.33
R3HDM1-219ENST00000488035 BARGINQ6ZT62 677 aa6.73□□□□□ -1.33
R3HDM1-219ENST00000488035 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.73□□□□□ -1.33
R3HDM1-219ENST00000488035 RIC3Q7Z5B4 369 aa6.73□□□□□ -1.33
R3HDM1-219ENST00000488035 PGPEP1Q9NXJ5 209 aa6.73□□□□□ -1.33
R3HDM1-219ENST00000488035 PHF20L1A8MW92 1017 aa6.72□□□□□ -1.33
R3HDM1-219ENST00000488035 CELA2BP08218 269 aaPredicted RBP6.72□□□□□ -1.33
R3HDM1-219ENST00000488035 TPRNQ4KMQ1 711 aa6.72□□□□□ -1.33
R3HDM1-219ENST00000488035 FIGNL2A6NMB9 653 aa6.71□□□□□ -1.34
R3HDM1-219ENST00000488035 PER1O15534 1290 aaPredicted RBP6.71□□□□□ -1.34
R3HDM1-219ENST00000488035 TSC1Q92574 1164 aa6.71□□□□□ -1.34
R3HDM1-219ENST00000488035 GPKOWQ92917 476 aaPredicted RBP eCLIP6.71□□□□□ -1.34
R3HDM1-219ENST00000488035 MAGEB6P1A0A0J9YX57 407 aa6.7□□□□□ -1.34
R3HDM1-219ENST00000488035 NUTM2BA6NNL0 878 aaPredicted RBP6.7□□□□□ -1.34
R3HDM1-219ENST00000488035 NUTM2EB1AL46 878 aaPredicted RBP6.7□□□□□ -1.34
R3HDM1-219ENST00000488035 MAP3K10Q02779 954 aa6.7□□□□□ -1.34
R3HDM1-219ENST00000488035 NUTM2DQ5VT03 806 aaPredicted RBP6.7□□□□□ -1.34
R3HDM1-219ENST00000488035 SH3BP5LQ7L8J4 393 aa6.7□□□□□ -1.34
R3HDM1-219ENST00000488035 NUTM2AQ8IVF1 878 aaPredicted RBP6.7□□□□□ -1.34
R3HDM1-219ENST00000488035 CABLES1Q8TDN4 633 aa6.7□□□□□ -1.34
R3HDM1-219ENST00000488035 ENAMQ9NRM1 1142 aa6.7□□□□□ -1.34
R3HDM1-219ENST00000488035 SENP3-EIF4A1A0A087X0R7 540 aa6.69□□□□□ -1.34
R3HDM1-219ENST00000488035 ZMYND10O75800 440 aa6.69□□□□□ -1.34
R3HDM1-219ENST00000488035 DHX9Q08211 1270 aaKnown RBP6.69□□□□□ -1.34
R3HDM1-219ENST00000488035 GAS6Q14393 721 aa6.69□□□□□ -1.34
R3HDM1-219ENST00000488035 CSPP1Q1MSJ5 1256 aa6.69□□□□□ -1.34
R3HDM1-219ENST00000488035 Q8N3U1 123 aa6.69□□□□□ -1.34
R3HDM1-219ENST00000488035 HELBQ8NG08 1087 aaPredicted RBP6.69□□□□□ -1.34
R3HDM1-219ENST00000488035 CDV3Q9UKY7 258 aaKnown RBP6.69□□□□□ -1.34
R3HDM1-219ENST00000488035 K7ELQ4 463 aaPredicted RBP6.68□□□□□ -1.34
R3HDM1-219ENST00000488035 TUSC1Q2TAM9 212 aa6.68□□□□□ -1.34
R3HDM1-219ENST00000488035 PPP1R26Q5T8A7 1209 aaPredicted RBP6.68□□□□□ -1.34
R3HDM1-219ENST00000488035 BEND7Q8N7W2 519 aaPredicted RBP6.68□□□□□ -1.34
R3HDM1-219ENST00000488035 CDC14CA4D256 554 aa6.67□□□□□ -1.34
R3HDM1-219ENST00000488035 KRTAP1-3Q8IUG1 177 aa6.67□□□□□ -1.34
R3HDM1-219ENST00000488035 PARP9Q8IXQ6 854 aa6.67□□□□□ -1.34
R3HDM1-219ENST00000488035 LRRC4BQ9NT99 713 aa6.67□□□□□ -1.34
R3HDM1-219ENST00000488035 CBLBQ13191 982 aa6.66□□□□□ -1.34
R3HDM1-219ENST00000488035 ERFEQ4G0M1 354 aa6.66□□□□□ -1.34
R3HDM1-219ENST00000488035 CARD14Q9BXL6 1004 aa6.66□□□□□ -1.34
R3HDM1-219ENST00000488035 SLC10A4Q96EP9 437 aa6.65□□□□□ -1.34
R3HDM1-219ENST00000488035 CNTNAP5Q8WYK1 1306 aa6.65□□□□□ -1.35
R3HDM1-219ENST00000488035 LILRB3O75022 631 aa6.64□□□□□ -1.35
R3HDM1-219ENST00000488035 CTSOP43234 321 aaPredicted RBP6.64□□□□□ -1.35
R3HDM1-219ENST00000488035 QPCTQ16769 361 aa6.64□□□□□ -1.35
R3HDM1-219ENST00000488035 RNF217Q8TC41 542 aa6.64□□□□□ -1.35
R3HDM1-219ENST00000488035 KCTD15Q96SI1 283 aaPredicted RBP6.64□□□□□ -1.35
R3HDM1-219ENST00000488035 ARHGAP9Q9BRR9 750 aa6.64□□□□□ -1.35
R3HDM1-219ENST00000488035 PDXDC2PQ6P474 469 aa6.63□□□□□ -1.35
R3HDM1-219ENST00000488035 GALNT6Q8NCL4 622 aa6.63□□□□□ -1.35
R3HDM1-219ENST00000488035 GMCL1Q96IK5 515 aa6.63□□□□□ -1.35
R3HDM1-219ENST00000488035 POLMQ9NP87 494 aaPredicted RBP6.63□□□□□ -1.35
R3HDM1-219ENST00000488035 BCRP11274 1271 aa6.62□□□□□ -1.35
R3HDM1-219ENST00000488035 BAG6P46379 1132 aa6.62□□□□□ -1.35
R3HDM1-219ENST00000488035 MYSM1Q5VVJ2 828 aa6.62□□□□□ -1.35
R3HDM1-219ENST00000488035 ALYREFQ86V81 257 aaKnown RBP6.62□□□□□ -1.35
R3HDM1-219ENST00000488035 ZC3H15Q8WU90 426 aaKnown RBP6.62□□□□□ -1.35
R3HDM1-219ENST00000488035 INSM2Q96T92 566 aaPredicted RBP6.62□□□□□ -1.35
R3HDM1-219ENST00000488035 MBIPQ9NS73 344 aa6.62□□□□□ -1.35
R3HDM1-219ENST00000488035 LIMD1Q9UGP4 676 aa6.62□□□□□ -1.35
R3HDM1-219ENST00000488035 TRIM66O15016 1216 aa6.61□□□□□ -1.35
R3HDM1-219ENST00000488035 RELBQ01201 579 aa6.61□□□□□ -1.35
R3HDM1-219ENST00000488035 PODNQ7Z5L7 613 aa6.61□□□□□ -1.35
R3HDM1-219ENST00000488035 ZBTB33Q86T24 672 aa6.61□□□□□ -1.35
R3HDM1-219ENST00000488035 AGBL1Q96MI9 1066 aa6.61□□□□□ -1.35
R3HDM1-219ENST00000488035 CUEDC1Q9NWM3 386 aaPredicted RBP6.61□□□□□ -1.35
R3HDM1-219ENST00000488035 ZC3H4Q9UPT8 1303 aaKnown RBP6.6□□□□□ -1.35
R3HDM1-219ENST00000488035 TRIM52Q96A61 297 aa6.6□□□□□ -1.35
R3HDM1-219ENST00000488035 AK7Q96M32 723 aa6.6□□□□□ -1.35
R3HDM1-219ENST00000488035 FKBPLQ9UIM3 349 aa6.6□□□□□ -1.35
R3HDM1-219ENST00000488035 RTL5Q5HYW3 569 aaPredicted RBP6.59□□□□□ -1.35
R3HDM1-219ENST00000488035 FOXR1Q6PIV2 292 aa6.59□□□□□ -1.35
R3HDM1-219ENST00000488035 IGF1RP08069 1367 aa6.58□□□□□ -1.36
R3HDM1-219ENST00000488035 KRBA1A5PL33 1030 aa6.58□□□□□ -1.36
R3HDM1-219ENST00000488035 PTK2Q05397 1052 aa6.58□□□□□ -1.36
R3HDM1-219ENST00000488035 NBPF20Q3BBV1 942 aa6.58□□□□□ -1.36
R3HDM1-219ENST00000488035 INTS6LQ5JSJ4 861 aaKnown RBP6.58□□□□□ -1.36
R3HDM1-219ENST00000488035 ACDQ96AP0 544 aa6.58□□□□□ -1.36
R3HDM1-219ENST00000488035 KRTAP4-12Q9BQ66 201 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms