RNA–Protein interactions for RNA: ENST00000487699.1

SATB1-215, Transcript of SATB homeobox 1, humanhuman

TSL 4

Gene SATB1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-215ENST00000487699 SEPT12Q8IYM1 358 aa13.47□□□□□ -0.25
SATB1-215ENST00000487699 POLR3GLQ9BT43 218 aa13.47□□□□□ -0.25
SATB1-215ENST00000487699 FAM98CQ17RN3 349 aaKnown RBP13.46□□□□□ -0.25
SATB1-215ENST00000487699 UPF1Q92900 1129 aaKnown RBP eCLIP13.46□□□□□ -0.25
SATB1-215ENST00000487699 COG3Q96JB2 828 aa13.46□□□□□ -0.25
SATB1-215ENST00000487699 EP400Q96L91 3159 aa13.45□□□□□ -0.26
SATB1-215ENST00000487699 MAP3K19Q56UN5 1328 aa13.45□□□□□ -0.26
SATB1-215ENST00000487699 ABCC6O95255 1503 aa13.45□□□□□ -0.26
SATB1-215ENST00000487699 THSD7AQ9UPZ6 1657 aa13.45□□□□□ -0.26
SATB1-215ENST00000487699 ZBTB7CA1YPR0 619 aa13.45□□□□□ -0.26
SATB1-215ENST00000487699 PER1O15534 1290 aaPredicted RBP13.45□□□□□ -0.26
SATB1-215ENST00000487699 BARGINQ6ZT62 677 aa13.45□□□□□ -0.26
SATB1-215ENST00000487699 CCDC9Q9Y3X0 531 aaKnown RBP13.45□□□□□ -0.26
SATB1-215ENST00000487699 CCDC7Q96M83 1385 aa13.45□□□□□ -0.26
SATB1-215ENST00000487699 WDR17Q8IZU2 1322 aa13.44□□□□□ -0.26
SATB1-215ENST00000487699 EVA1CP58658 441 aa13.44□□□□□ -0.26
SATB1-215ENST00000487699 IP6K1Q92551 441 aa13.44□□□□□ -0.26
SATB1-215ENST00000487699 RGPD5Q99666 1765 aa13.44□□□□□ -0.26
SATB1-215ENST00000487699 CRB1P82279 1406 aa13.43□□□□□ -0.26
SATB1-215ENST00000487699 RRS1Q15050 365 aaKnown RBP13.43□□□□□ -0.26
SATB1-215ENST00000487699 ERBB3P21860 1342 aa13.42□□□□□ -0.26
SATB1-215ENST00000487699 BRWD3Q6RI45 1802 aa13.42□□□□□ -0.26
SATB1-215ENST00000487699 HOXC9P31274 260 aa13.42□□□□□ -0.26
SATB1-215ENST00000487699 AMER1Q5JTC6 1135 aaPredicted RBP13.42□□□□□ -0.26
SATB1-215ENST00000487699 TCP11L2Q8N4U5 519 aa13.42□□□□□ -0.26
SATB1-215ENST00000487699 CGNL1Q0VF96 1302 aa13.41□□□□□ -0.26
SATB1-215ENST00000487699 KIF20BQ96Q89 1820 aa13.41□□□□□ -0.26
SATB1-215ENST00000487699 LTN1O94822 1766 aa13.41□□□□□ -0.26
SATB1-215ENST00000487699 CARD10Q9BWT7 1032 aa13.41□□□□□ -0.26
SATB1-215ENST00000487699 USP35Q9P2H5 1018 aa13.41□□□□□ -0.26
SATB1-215ENST00000487699 THRAP3Q9Y2W1 955 aaKnown RBP13.41□□□□□ -0.26
SATB1-215ENST00000487699 DISP2A7MBM2 1401 aa13.4□□□□□ -0.26
SATB1-215ENST00000487699 PEAK1Q9H792 1746 aa13.4□□□□□ -0.26
SATB1-215ENST00000487699 ANKRD24Q8TF21 1146 aa13.4□□□□□ -0.26
SATB1-215ENST00000487699 BLMP54132 1417 aaPredicted RBP13.39□□□□□ -0.27
SATB1-215ENST00000487699 TOM1L2Q6ZVM7 507 aa13.39□□□□□ -0.27
SATB1-215ENST00000487699 KRT27Q7Z3Y8 459 aa13.39□□□□□ -0.27
SATB1-215ENST00000487699 EMILIN1Q9Y6C2 1016 aa13.39□□□□□ -0.27
SATB1-215ENST00000487699 HSP90AB2PQ58FF8 381 aa13.38□□□□□ -0.27
SATB1-215ENST00000487699 FAM182BQ5T319 152 aa13.38□□□□□ -0.27
SATB1-215ENST00000487699 POLKQ9UBT6 870 aa13.38□□□□□ -0.27
SATB1-215ENST00000487699 RTL1A6NKG5 1358 aa13.37□□□□□ -0.27
SATB1-215ENST00000487699 AMPHP49418 695 aa13.36□□□□□ -0.27
SATB1-215ENST00000487699 NSD2O96028 1365 aa13.35□□□□□ -0.27
SATB1-215ENST00000487699 INSRP06213 1382 aa13.35□□□□□ -0.27
SATB1-215ENST00000487699 KIF24Q5T7B8 1368 aa13.35□□□□□ -0.27
SATB1-215ENST00000487699 PARP4Q9UKK3 1724 aaKnown RBP13.34□□□□□ -0.27
SATB1-215ENST00000487699 ANKRD26Q9UPS8 1709 aa13.34□□□□□ -0.27
SATB1-215ENST00000487699 CSB-PGBD3P0DP91 1061 aa13.34□□□□□ -0.27
SATB1-215ENST00000487699 NBPF6Q5VWK0 638 aa13.34□□□□□ -0.27
SATB1-215ENST00000487699 LTV1Q96GA3 475 aaPredicted RBP13.34□□□□□ -0.27
SATB1-215ENST00000487699 NBPF4Q96M43 638 aa13.34□□□□□ -0.27
SATB1-215ENST00000487699 NLRP2Q9NX02 1062 aa13.34□□□□□ -0.27
SATB1-215ENST00000487699 KNSTRNQ9Y448 316 aa13.34□□□□□ -0.27
SATB1-215ENST00000487699 FLT4P35916 1363 aa13.33□□□□□ -0.27
SATB1-215ENST00000487699 SMG6Q86US8 1419 aaKnown RBP13.33□□□□□ -0.28
SATB1-215ENST00000487699 TNNT2P45379 298 aaPredicted RBP13.33□□□□□ -0.28
SATB1-215ENST00000487699 FAM208AQ9UK61 1670 aaKnown RBP13.33□□□□□ -0.28
SATB1-215ENST00000487699 NPC1L1Q9UHC9 1359 aa13.32□□□□□ -0.28
SATB1-215ENST00000487699 WNK3Q9BYP7 1800 aa13.32□□□□□ -0.28
SATB1-215ENST00000487699 LRRC37A3O60309 1634 aa13.32□□□□□ -0.28
SATB1-215ENST00000487699 A0A0G2JS52 829 aa13.32□□□□□ -0.28
SATB1-215ENST00000487699 MYT1Q01538 1121 aa13.32□□□□□ -0.28
SATB1-215ENST00000487699 MARCH10Q8NA82 808 aaPredicted RBP13.32□□□□□ -0.28
SATB1-215ENST00000487699 NCAPD2Q15021 1401 aa13.31□□□□□ -0.28
SATB1-215ENST00000487699 MORC1Q86VD1 984 aa13.31□□□□□ -0.28
SATB1-215ENST00000487699 CDCA7Q9BWT1 371 aaPredicted RBP13.31□□□□□ -0.28
SATB1-215ENST00000487699 RGPD2P0DJD1 1756 aa13.3□□□□□ -0.28
SATB1-215ENST00000487699 MAP2P11137 1827 aaKnown RBP13.3□□□□□ -0.28
SATB1-215ENST00000487699 DDB1Q16531 1140 aa13.3□□□□□ -0.28
SATB1-215ENST00000487699 CCDC125Q86Z20 511 aa13.3□□□□□ -0.28
SATB1-215ENST00000487699 IL2RBP14784 551 aa13.29□□□□□ -0.28
SATB1-215ENST00000487699 PDE3BQ13370 1112 aa13.29□□□□□ -0.28
SATB1-215ENST00000487699 EIF4A2Q14240 407 aaKnown RBP13.29□□□□□ -0.28
SATB1-215ENST00000487699 CC2D1BQ5T0F9 858 aaKnown RBP13.29□□□□□ -0.28
SATB1-215ENST00000487699 PTF1AQ7RTS3 328 aa13.29□□□□□ -0.28
SATB1-215ENST00000487699 USHBP1Q8N6Y0 703 aa13.29□□□□□ -0.28
SATB1-215ENST00000487699 BCL9O00512 1426 aa13.29□□□□□ -0.28
SATB1-215ENST00000487699 MEGF6O75095 1541 aa13.29□□□□□ -0.28
SATB1-215ENST00000487699 PPM1GO15355 546 aaPredicted RBP13.28□□□□□ -0.28
SATB1-215ENST00000487699 FAM196AQ6ZSG2 479 aa13.28□□□□□ -0.28
SATB1-215ENST00000487699 DEFB132Q7Z7B7 95 aa13.28□□□□□ -0.28
SATB1-215ENST00000487699 EYA1Q99502 592 aa13.28□□□□□ -0.28
SATB1-215ENST00000487699 TNS2Q63HR2 1409 aa13.28□□□□□ -0.28
SATB1-215ENST00000487699 EXOC5O00471 708 aa13.27□□□□□ -0.29
SATB1-215ENST00000487699 TRIM37O94972 964 aa13.26□□□□□ -0.29
SATB1-215ENST00000487699 ZEB1P37275 1124 aaPredicted RBP13.26□□□□□ -0.29
SATB1-215ENST00000487699 OVOS2A0A0G2JMS6 1433 aa13.25□□□□□ -0.29
SATB1-215ENST00000487699 IL13P35225 146 aa13.25□□□□□ -0.29
SATB1-215ENST00000487699 TNS1Q9HBL0 1735 aaKnown RBP13.25□□□□□ -0.29
SATB1-215ENST00000487699 IGSF1Q8N6C5 1336 aa13.24□□□□□ -0.29
SATB1-215ENST00000487699 MTHFSP49914 203 aa13.24□□□□□ -0.29
SATB1-215ENST00000487699 SHANK3Q9BYB0 1731 aa13.24□□□□□ -0.29
SATB1-215ENST00000487699 CAMKK2Q96RR4 588 aa13.23□□□□□ -0.29
SATB1-215ENST00000487699 KCNQ2O43526 872 aa13.22□□□□□ -0.29
SATB1-215ENST00000487699 EN1Q05925 392 aaPredicted RBP13.22□□□□□ -0.29
SATB1-215ENST00000487699 ZCRB1Q8TBF4 217 aaKnown RBP13.22□□□□□ -0.29
SATB1-215ENST00000487699 COL3A1P02461 1466 aaPredicted RBP13.22□□□□□ -0.29
SATB1-215ENST00000487699 SBF2Q86WG5 1849 aa13.21□□□□□ -0.29
SATB1-215ENST00000487699 CYP27B1O15528 508 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms