RNA–Protein interactions for RNA: ENST00000486983.1

SMARCAL1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 793 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-212ENST00000486983 DENND4BO75064 1496 aaPredicted RBP10.06□□□□□ -0.8
SMARCAL1-212ENST00000486983 SHANK2Q9UPX8 1470 aa10.06□□□□□ -0.8
SMARCAL1-212ENST00000486983 MRGPRX2Q96LB1 330 aa10.06□□□□□ -0.8
SMARCAL1-212ENST00000486983 SIN3AQ96ST3 1273 aa10.06□□□□□ -0.8
SMARCAL1-212ENST00000486983 SHROOM2Q13796 1616 aa10.05□□□□□ -0.8
SMARCAL1-212ENST00000486983 J3QL48 77 aa10.05□□□□□ -0.8
SMARCAL1-212ENST00000486983 INSM1Q01101 510 aaPredicted RBP10.05□□□□□ -0.8
SMARCAL1-212ENST00000486983 TRIM47Q96LD4 638 aa10.05□□□□□ -0.8
SMARCAL1-212ENST00000486983 PRG4Q92954 1404 aaPredicted RBP10.05□□□□□ -0.8
SMARCAL1-212ENST00000486983 ABCC10Q5T3U5 1492 aa10.04□□□□□ -0.8
SMARCAL1-212ENST00000486983 KDM6BO15054 1643 aa10.04□□□□□ -0.8
SMARCAL1-212ENST00000486983 MMP16P51512 607 aa10.03□□□□□ -0.8
SMARCAL1-212ENST00000486983 TERTO14746 1132 aaKnown RBP10.02□□□□□ -0.81
SMARCAL1-212ENST00000486983 HPS1Q92902 700 aa10.02□□□□□ -0.81
SMARCAL1-212ENST00000486983 ATP10BO94823 1461 aa10.02□□□□□ -0.81
SMARCAL1-212ENST00000486983 ARHGEF5Q12774 1597 aa10.01□□□□□ -0.81
SMARCAL1-212ENST00000486983 NCOA1Q15788 1441 aa10□□□□□ -0.81
SMARCAL1-212ENST00000486983 RPRD2Q5VT52 1461 aaKnown RBP10□□□□□ -0.81
SMARCAL1-212ENST00000486983 GRIPAP1Q4V328 841 aa10□□□□□ -0.81
SMARCAL1-212ENST00000486983 SENP2Q9HC62 589 aa10□□□□□ -0.81
SMARCAL1-212ENST00000486983 RRP7BPQ9NSQ0 103 aa10□□□□□ -0.81
SMARCAL1-212ENST00000486983 CDC42BPAQ5VT25 1732 aa9.99□□□□□ -0.81
SMARCAL1-212ENST00000486983 DXOO77932 396 aaKnown RBP9.99□□□□□ -0.81
SMARCAL1-212ENST00000486983 Q3C1V9 767 aa9.99□□□□□ -0.81
SMARCAL1-212ENST00000486983 SMYD5Q6GMV2 418 aa9.99□□□□□ -0.81
SMARCAL1-212ENST00000486983 CFDP1Q9UEE9 299 aaPredicted RBP9.99□□□□□ -0.81
SMARCAL1-212ENST00000486983 PTPRGP23470 1445 aa9.99□□□□□ -0.81
SMARCAL1-212ENST00000486983 KDM5DQ9BY66 1539 aa9.98□□□□□ -0.81
SMARCAL1-212ENST00000486983 MPHOSPH9Q99550 1183 aa9.98□□□□□ -0.81
SMARCAL1-212ENST00000486983 REPIN1Q9BWE0 567 aaKnown RBP9.98□□□□□ -0.81
SMARCAL1-212ENST00000486983 CHIC2Q9UKJ5 165 aa9.98□□□□□ -0.81
SMARCAL1-212ENST00000486983 GTF3C3Q9Y5Q9 886 aa9.98□□□□□ -0.81
SMARCAL1-212ENST00000486983 ANKRD30BQ9BXX2 1392 aa9.98□□□□□ -0.81
SMARCAL1-212ENST00000486983 ANKRD30AQ9BXX3 1397 aa9.98□□□□□ -0.81
SMARCAL1-212ENST00000486983 PREX2Q70Z35 1606 aa9.97□□□□□ -0.81
SMARCAL1-212ENST00000486983 PLEKHD1A6NEE1 506 aa9.97□□□□□ -0.81
SMARCAL1-212ENST00000486983 ARID3CA6NKF2 412 aa9.97□□□□□ -0.81
SMARCAL1-212ENST00000486983 PZPP20742 1482 aa9.97□□□□□ -0.81
SMARCAL1-212ENST00000486983 TEX14Q8IWB6 1497 aa9.97□□□□□ -0.81
SMARCAL1-212ENST00000486983 CD46P15529 392 aa9.96□□□□□ -0.82
SMARCAL1-212ENST00000486983 SKOR1P84550 965 aa9.96□□□□□ -0.82
SMARCAL1-212ENST00000486983 USB1Q9BQ65 265 aaKnown RBP9.96□□□□□ -0.82
SMARCAL1-212ENST00000486983 ZNF644Q9H582 1327 aaPredicted RBP9.96□□□□□ -0.82
SMARCAL1-212ENST00000486983 ABCC2Q92887 1545 aa9.96□□□□□ -0.82
SMARCAL1-212ENST00000486983 RC3H1Q5TC82 1133 aaKnown RBP9.95□□□□□ -0.82
SMARCAL1-212ENST00000486983 HLA-CQ95604 372 aa9.95□□□□□ -0.82
SMARCAL1-212ENST00000486983 TRIM52Q96A61 297 aa9.95□□□□□ -0.82
SMARCAL1-212ENST00000486983 KIFC2Q96AC6 838 aa9.95□□□□□ -0.82
SMARCAL1-212ENST00000486983 YTHDC1Q96MU7 727 aaKnown RBP9.95□□□□□ -0.82
SMARCAL1-212ENST00000486983 CLASP1Q7Z460 1538 aa9.95□□□□□ -0.82
SMARCAL1-212ENST00000486983 MAST1Q9Y2H9 1570 aa9.94□□□□□ -0.82
SMARCAL1-212ENST00000486983 C9orf84Q5VXU9 1444 aa9.94□□□□□ -0.82
SMARCAL1-212ENST00000486983 UHRF1BP1LA0JNW5 1464 aa9.93□□□□□ -0.82
SMARCAL1-212ENST00000486983 CCDC141Q6ZP82 1450 aa9.93□□□□□ -0.82
SMARCAL1-212ENST00000486983 MBD5Q9P267 1494 aa9.93□□□□□ -0.82
SMARCAL1-212ENST00000486983 ANKRD50Q9ULJ7 1429 aa9.93□□□□□ -0.82
SMARCAL1-212ENST00000486983 KIAA1107Q9UPP5 1409 aa9.93□□□□□ -0.82
SMARCAL1-212ENST00000486983 CCER2I3L3R5 266 aa9.93□□□□□ -0.82
SMARCAL1-212ENST00000486983 CCDC24Q8N4L8 307 aa9.93□□□□□ -0.82
SMARCAL1-212ENST00000486983 PLEKHH2Q8IVE3 1493 aa9.92□□□□□ -0.82
SMARCAL1-212ENST00000486983 KDM4AO75164 1064 aa9.92□□□□□ -0.82
SMARCAL1-212ENST00000486983 WNT7BP56706 349 aa9.92□□□□□ -0.82
SMARCAL1-212ENST00000486983 GPIHBP1Q8IV16 184 aa9.92□□□□□ -0.82
SMARCAL1-212ENST00000486983 SAMD9LQ8IVG5 1584 aa9.92□□□□□ -0.82
SMARCAL1-212ENST00000486983 ARHGEF12Q9NZN5 1544 aa9.9□□□□□ -0.82
SMARCAL1-212ENST00000486983 PLXNC1O60486 1568 aa9.89□□□□□ -0.83
SMARCAL1-212ENST00000486983 ALDH1A1P00352 501 aa9.89□□□□□ -0.83
SMARCAL1-212ENST00000486983 DDX10Q13206 875 aaKnown RBP9.89□□□□□ -0.83
SMARCAL1-212ENST00000486983 CDC42BPBQ9Y5S2 1711 aa9.89□□□□□ -0.83
SMARCAL1-212ENST00000486983 ERCC6L2Q5T890 1561 aa9.88□□□□□ -0.83
SMARCAL1-212ENST00000486983 TTC37Q6PGP7 1564 aa9.88□□□□□ -0.83
SMARCAL1-212ENST00000486983 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.88□□□□□ -0.83
SMARCAL1-212ENST00000486983 BMP1P13497 986 aa9.88□□□□□ -0.83
SMARCAL1-212ENST00000486983 KIF15Q9NS87 1388 aa9.88□□□□□ -0.83
SMARCAL1-212ENST00000486983 ARAP3Q8WWN8 1544 aa9.87□□□□□ -0.83
SMARCAL1-212ENST00000486983 HOXA2O43364 376 aa9.87□□□□□ -0.83
SMARCAL1-212ENST00000486983 ANP32CO43423 234 aa9.87□□□□□ -0.83
SMARCAL1-212ENST00000486983 TSPY4P0CV99 314 aa9.87□□□□□ -0.83
SMARCAL1-212ENST00000486983 TSPY10P0CW01 314 aa9.87□□□□□ -0.83
SMARCAL1-212ENST00000486983 EIF4G2P78344 907 aaKnown RBP eCLIP9.87□□□□□ -0.83
SMARCAL1-212ENST00000486983 L3MBTL2Q969R5 705 aa9.87□□□□□ -0.83
SMARCAL1-212ENST00000486983 UHRF1BP1Q6BDS2 1440 aa9.87□□□□□ -0.83
SMARCAL1-212ENST00000486983 SPATA31E1Q6ZUB1 1445 aa9.87□□□□□ -0.83
SMARCAL1-212ENST00000486983 UNC13BO14795 1591 aa9.87□□□□□ -0.83
SMARCAL1-212ENST00000486983 USP46P62068 366 aa9.86□□□□□ -0.83
SMARCAL1-212ENST00000486983 GUCA2AQ02747 115 aa9.86□□□□□ -0.83
SMARCAL1-212ENST00000486983 TRIM46Q7Z4K8 759 aa9.86□□□□□ -0.83
SMARCAL1-212ENST00000486983 MYO5CQ9NQX4 1742 aa9.86□□□□□ -0.83
SMARCAL1-212ENST00000486983 NXF1Q9UBU9 619 aaKnown RBP9.86□□□□□ -0.83
SMARCAL1-212ENST00000486983 POLR1AO95602 1720 aaPredicted RBP9.85□□□□□ -0.83
SMARCAL1-212ENST00000486983 CNTLNQ9NXG0 1405 aa9.85□□□□□ -0.83
SMARCAL1-212ENST00000486983 HSPA5P11021 654 aaKnown RBP9.85□□□□□ -0.83
SMARCAL1-212ENST00000486983 JUNDP17535 347 aa9.85□□□□□ -0.83
SMARCAL1-212ENST00000486983 LORP23490 312 aaPredicted RBP9.85□□□□□ -0.83
SMARCAL1-212ENST00000486983 GMPRP36959 345 aa9.85□□□□□ -0.83
SMARCAL1-212ENST00000486983 SLC16A10Q8TF71 515 aa9.85□□□□□ -0.83
SMARCAL1-212ENST00000486983 ZNF777Q9ULD5 760 aaPredicted RBP9.85□□□□□ -0.83
SMARCAL1-212ENST00000486983 ARHGAP5Q13017 1502 aa9.85□□□□□ -0.83
SMARCAL1-212ENST00000486983 SYCP2Q9BX26 1530 aa9.85□□□□□ -0.83
SMARCAL1-212ENST00000486983 ZCCHC11Q5TAX3 1644 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms