RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 FYB1O15117 783 aa25.18■■□□□ 1.62
COL1A1-207ENST00000486572 FAM98CQ17RN3 349 aaKnown RBP25.17■■□□□ 1.62
COL1A1-207ENST00000486572 LARP1Q6PKG0 1096 aaKnown RBP25.17■■□□□ 1.62
COL1A1-207ENST00000486572 SEPT12Q8IYM1 358 aa25.17■■□□□ 1.62
COL1A1-207ENST00000486572 GGNBP2Q9H3C7 697 aa25.16■■□□□ 1.62
COL1A1-207ENST00000486572 AXIN2Q9Y2T1 843 aa25.16■■□□□ 1.62
COL1A1-207ENST00000486572 CRB1P82279 1406 aa25.15■■□□□ 1.62
COL1A1-207ENST00000486572 THSD7AQ9UPZ6 1657 aa25.15■■□□□ 1.62
COL1A1-207ENST00000486572 KIF7Q2M1P5 1343 aa25.14■■□□□ 1.62
COL1A1-207ENST00000486572 A0A0G2JS52 829 aa25.14■■□□□ 1.62
COL1A1-207ENST00000486572 MYT1Q01538 1121 aa25.14■■□□□ 1.62
COL1A1-207ENST00000486572 RGPD5Q99666 1765 aa25.13■■□□□ 1.61
COL1A1-207ENST00000486572 USP35Q9P2H5 1018 aa25.13■■□□□ 1.61
COL1A1-207ENST00000486572 BRWD3Q6RI45 1802 aa25.13■■□□□ 1.61
COL1A1-207ENST00000486572 CGNL1Q0VF96 1302 aa25.12■■□□□ 1.61
COL1A1-207ENST00000486572 WDR17Q8IZU2 1322 aa25.12■■□□□ 1.61
COL1A1-207ENST00000486572 BARGINQ6ZT62 677 aa25.1■■□□□ 1.61
COL1A1-207ENST00000486572 TCP11L2Q8N4U5 519 aa25.1■■□□□ 1.61
COL1A1-207ENST00000486572 PANK3Q9H999 370 aa25.1■■□□□ 1.61
COL1A1-207ENST00000486572 TOM1L2Q6ZVM7 507 aa25.09■■□□□ 1.61
COL1A1-207ENST00000486572 UPF1Q92900 1129 aaKnown RBP eCLIP25.09■■□□□ 1.61
COL1A1-207ENST00000486572 THRAP3Q9Y2W1 955 aaKnown RBP25.09■■□□□ 1.61
COL1A1-207ENST00000486572 BLMP54132 1417 aaPredicted RBP25.09■■□□□ 1.61
COL1A1-207ENST00000486572 CSB-PGBD3P0DP91 1061 aa25.08■■□□□ 1.61
COL1A1-207ENST00000486572 MAP3K19Q56UN5 1328 aa25.08■■□□□ 1.6
COL1A1-207ENST00000486572 KRT27Q7Z3Y8 459 aa25.07■■□□□ 1.6
COL1A1-207ENST00000486572 ERBB3P21860 1342 aa25.06■■□□□ 1.6
COL1A1-207ENST00000486572 FBLN1P23142 703 aa25.05■■□□□ 1.6
COL1A1-207ENST00000486572 IP6K1Q92551 441 aa25.05■■□□□ 1.6
COL1A1-207ENST00000486572 ANKRD26Q9UPS8 1709 aa25.05■■□□□ 1.6
COL1A1-207ENST00000486572 RTL1A6NKG5 1358 aa25.05■■□□□ 1.6
COL1A1-207ENST00000486572 CCDC7Q96M83 1385 aa25.05■■□□□ 1.6
COL1A1-207ENST00000486572 WNK3Q9BYP7 1800 aa25.02■■□□□ 1.6
COL1A1-207ENST00000486572 HOXC9P31274 260 aa25.02■■□□□ 1.6
COL1A1-207ENST00000486572 AMPHP49418 695 aa25.02■■□□□ 1.6
COL1A1-207ENST00000486572 RRS1Q15050 365 aaKnown RBP25.02■■□□□ 1.6
COL1A1-207ENST00000486572 ANKRD24Q8TF21 1146 aa25.02■■□□□ 1.6
COL1A1-207ENST00000486572 CARD10Q9BWT7 1032 aa25.02■■□□□ 1.6
COL1A1-207ENST00000486572 PARP4Q9UKK3 1724 aaKnown RBP25.02■■□□□ 1.6
COL1A1-207ENST00000486572 WASHC2AQ641Q2 1341 aa25.02■■□□□ 1.6
COL1A1-207ENST00000486572 NSD2O96028 1365 aa25.01■■□□□ 1.59
COL1A1-207ENST00000486572 FAM208AQ9UK61 1670 aaKnown RBP25.01■■□□□ 1.59
COL1A1-207ENST00000486572 KIF24Q5T7B8 1368 aa24.99■■□□□ 1.59
COL1A1-207ENST00000486572 KNSTRNQ9Y448 316 aa24.99■■□□□ 1.59
COL1A1-207ENST00000486572 EP400Q96L91 3159 aa24.98■■□□□ 1.59
COL1A1-207ENST00000486572 NLRP2Q9NX02 1062 aa24.98■■□□□ 1.59
COL1A1-207ENST00000486572 PEAK1Q9H792 1746 aa24.98■■□□□ 1.59
COL1A1-207ENST00000486572 LRRC37A3O60309 1634 aa24.97■■□□□ 1.59
COL1A1-207ENST00000486572 FLT4P35916 1363 aa24.96■■□□□ 1.59
COL1A1-207ENST00000486572 CDCA7Q9BWT1 371 aaPredicted RBP24.96■■□□□ 1.59
COL1A1-207ENST00000486572 DISP2A7MBM2 1401 aa24.95■■□□□ 1.59
COL1A1-207ENST00000486572 LTV1Q96GA3 475 aaPredicted RBP24.95■■□□□ 1.58
COL1A1-207ENST00000486572 PDE3BQ13370 1112 aa24.94■■□□□ 1.58
COL1A1-207ENST00000486572 SMG6Q86US8 1419 aaKnown RBP24.94■■□□□ 1.58
COL1A1-207ENST00000486572 FAM182BQ5T319 152 aa24.93■■□□□ 1.58
COL1A1-207ENST00000486572 CCDC125Q86Z20 511 aa24.93■■□□□ 1.58
COL1A1-207ENST00000486572 EMILIN1Q9Y6C2 1016 aa24.93■■□□□ 1.58
COL1A1-207ENST00000486572 INSRP06213 1382 aa24.93■■□□□ 1.58
COL1A1-207ENST00000486572 DDB1Q16531 1140 aa24.91■■□□□ 1.58
COL1A1-207ENST00000486572 TNNT2P45379 298 aaPredicted RBP24.9■■□□□ 1.58
COL1A1-207ENST00000486572 HSP90AB2PQ58FF8 381 aa24.9■■□□□ 1.58
COL1A1-207ENST00000486572 AMER1Q5JTC6 1135 aaPredicted RBP24.9■■□□□ 1.58
COL1A1-207ENST00000486572 MAP2P11137 1827 aaKnown RBP24.89■■□□□ 1.58
COL1A1-207ENST00000486572 PPM1GO15355 546 aaPredicted RBP24.89■■□□□ 1.58
COL1A1-207ENST00000486572 PER1O15534 1290 aaPredicted RBP24.89■■□□□ 1.58
COL1A1-207ENST00000486572 MORC1Q86VD1 984 aa24.89■■□□□ 1.58
COL1A1-207ENST00000486572 FAM196AQ6ZSG2 479 aa24.88■■□□□ 1.57
COL1A1-207ENST00000486572 POLKQ9UBT6 870 aa24.88■■□□□ 1.57
COL1A1-207ENST00000486572 TNS2Q63HR2 1409 aa24.87■■□□□ 1.57
COL1A1-207ENST00000486572 IL2RBP14784 551 aa24.87■■□□□ 1.57
COL1A1-207ENST00000486572 RGPD2P0DJD1 1756 aa24.87■■□□□ 1.57
COL1A1-207ENST00000486572 OVOS2A0A0G2JMS6 1433 aa24.86■■□□□ 1.57
COL1A1-207ENST00000486572 RGPD1P0DJD0 1748 aa24.86■■□□□ 1.57
COL1A1-207ENST00000486572 ZEB1P37275 1124 aaPredicted RBP24.85■■□□□ 1.57
COL1A1-207ENST00000486572 SF3B2Q13435 895 aaKnown RBP24.85■■□□□ 1.57
COL1A1-207ENST00000486572 EXOC5O00471 708 aa24.84■■□□□ 1.57
COL1A1-207ENST00000486572 NBPF6Q5VWK0 638 aa24.83■■□□□ 1.57
COL1A1-207ENST00000486572 NBPF4Q96M43 638 aa24.83■■□□□ 1.57
COL1A1-207ENST00000486572 NPC1L1Q9UHC9 1359 aa24.82■■□□□ 1.56
COL1A1-207ENST00000486572 TNS1Q9HBL0 1735 aaKnown RBP24.82■■□□□ 1.56
COL1A1-207ENST00000486572 CC2D1BQ5T0F9 858 aaKnown RBP24.8■■□□□ 1.56
COL1A1-207ENST00000486572 MARCH10Q8NA82 808 aaPredicted RBP24.8■■□□□ 1.56
COL1A1-207ENST00000486572 USHBP1Q8N6Y0 703 aa24.79■■□□□ 1.56
COL1A1-207ENST00000486572 MEGF6O75095 1541 aa24.79■■□□□ 1.56
COL1A1-207ENST00000486572 BCL9O00512 1426 aa24.78■■□□□ 1.56
COL1A1-207ENST00000486572 TRIM37O94972 964 aa24.78■■□□□ 1.56
COL1A1-207ENST00000486572 BAG6P46379 1132 aa24.76■■□□□ 1.55
COL1A1-207ENST00000486572 DEFB132Q7Z7B7 95 aa24.76■■□□□ 1.55
COL1A1-207ENST00000486572 NCAPD2Q15021 1401 aa24.76■■□□□ 1.55
COL1A1-207ENST00000486572 RAPGEF4Q8WZA2 1011 aa24.75■■□□□ 1.55
COL1A1-207ENST00000486572 EIF4A2Q14240 407 aaKnown RBP24.74■■□□□ 1.55
COL1A1-207ENST00000486572 SBF2Q86WG5 1849 aa24.73■■□□□ 1.55
COL1A1-207ENST00000486572 EYA1Q99502 592 aa24.72■■□□□ 1.55
COL1A1-207ENST00000486572 TATP17735 454 aaPredicted RBP24.71■■□□□ 1.55
COL1A1-207ENST00000486572 CNGB1Q14028 1251 aaPredicted RBP24.71■■□□□ 1.55
COL1A1-207ENST00000486572 SHANK3Q9BYB0 1731 aa24.71■■□□□ 1.55
COL1A1-207ENST00000486572 ZCRB1Q8TBF4 217 aaKnown RBP24.7■■□□□ 1.54
COL1A1-207ENST00000486572 APBA3O96018 575 aa24.69■■□□□ 1.54
COL1A1-207ENST00000486572 MTHFSP49914 203 aa24.68■■□□□ 1.54
COL1A1-207ENST00000486572 EN1Q05925 392 aaPredicted RBP24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms