RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 ZC3H6P61129 1189 aaKnown RBP17.56■□□□□ 0.4
VTI1BP1-201ENST00000486325 CABLES1Q8TDN4 633 aa17.56■□□□□ 0.4
VTI1BP1-201ENST00000486325 BLMP54132 1417 aaPredicted RBP17.55■□□□□ 0.4
VTI1BP1-201ENST00000486325 MED1Q15648 1581 aaPredicted RBP17.55■□□□□ 0.4
VTI1BP1-201ENST00000486325 ZBTB7CA1YPR0 619 aa17.55■□□□□ 0.4
VTI1BP1-201ENST00000486325 CPDO75976 1380 aa17.54■□□□□ 0.4
VTI1BP1-201ENST00000486325 NCBP3Q53F19 620 aaKnown RBP17.54■□□□□ 0.4
VTI1BP1-201ENST00000486325 ZBED9Q6R2W3 1325 aa17.53■□□□□ 0.4
VTI1BP1-201ENST00000486325 SHPRHQ149N8 1683 aa17.53■□□□□ 0.4
VTI1BP1-201ENST00000486325 PEAK1Q9H792 1746 aa17.52■□□□□ 0.39
VTI1BP1-201ENST00000486325 MAPK8IP3Q9UPT6 1336 aa17.51■□□□□ 0.39
VTI1BP1-201ENST00000486325 PHRF1Q9P1Y6 1649 aaKnown RBP17.51■□□□□ 0.39
VTI1BP1-201ENST00000486325 CCDC146Q8IYE0 955 aa17.51■□□□□ 0.39
VTI1BP1-201ENST00000486325 PHLPP1O60346 1717 aa17.5■□□□□ 0.39
VTI1BP1-201ENST00000486325 APAF1O14727 1248 aa17.5■□□□□ 0.39
VTI1BP1-201ENST00000486325 PLEKHF1Q96S99 279 aa17.5■□□□□ 0.39
VTI1BP1-201ENST00000486325 EYA1Q99502 592 aa17.5■□□□□ 0.39
VTI1BP1-201ENST00000486325 RSPH6AQ9H0K4 717 aa17.5■□□□□ 0.39
VTI1BP1-201ENST00000486325 PRDM11Q9NQV5 511 aa17.5■□□□□ 0.39
VTI1BP1-201ENST00000486325 LTN1O94822 1766 aa17.5■□□□□ 0.39
VTI1BP1-201ENST00000486325 ABCC6O95255 1503 aa17.49■□□□□ 0.39
VTI1BP1-201ENST00000486325 SULT6B1Q6IMI4 303 aa17.49■□□□□ 0.39
VTI1BP1-201ENST00000486325 TCP11L2Q8N4U5 519 aa17.49■□□□□ 0.39
VTI1BP1-201ENST00000486325 LTV1Q96GA3 475 aaPredicted RBP17.49■□□□□ 0.39
VTI1BP1-201ENST00000486325 KIAA0232Q92628 1395 aa17.49■□□□□ 0.39
VTI1BP1-201ENST00000486325 HMOX1P09601 288 aa17.48■□□□□ 0.39
VTI1BP1-201ENST00000486325 PRKAR2BP31323 418 aa17.48■□□□□ 0.39
VTI1BP1-201ENST00000486325 PDE3BQ13370 1112 aa17.48■□□□□ 0.39
VTI1BP1-201ENST00000486325 ANKRD24Q8TF21 1146 aa17.48■□□□□ 0.39
VTI1BP1-201ENST00000486325 AXIN2Q9Y2T1 843 aa17.48■□□□□ 0.39
VTI1BP1-201ENST00000486325 IGSF1Q8N6C5 1336 aa17.47■□□□□ 0.39
VTI1BP1-201ENST00000486325 CRYBG1Q9Y4K1 1723 aa17.47■□□□□ 0.39
VTI1BP1-201ENST00000486325 COL16A1Q07092 1604 aaPredicted RBP17.47■□□□□ 0.39
VTI1BP1-201ENST00000486325 CHRNA2Q15822 529 aa17.46■□□□□ 0.39
VTI1BP1-201ENST00000486325 JCADQ9P266 1359 aa17.45■□□□□ 0.38
VTI1BP1-201ENST00000486325 CCDC27Q2M243 656 aa17.45■□□□□ 0.38
VTI1BP1-201ENST00000486325 COL22A1Q8NFW1 1626 aaPredicted RBP17.45■□□□□ 0.38
VTI1BP1-201ENST00000486325 KDRP35968 1356 aa17.44■□□□□ 0.38
VTI1BP1-201ENST00000486325 CSB-PGBD3P0DP91 1061 aa17.44■□□□□ 0.38
VTI1BP1-201ENST00000486325 NBPF6Q5VWK0 638 aa17.44■□□□□ 0.38
VTI1BP1-201ENST00000486325 NBPF4Q96M43 638 aa17.44■□□□□ 0.38
VTI1BP1-201ENST00000486325 SALL2Q9Y467 1007 aaPredicted RBP17.44■□□□□ 0.38
VTI1BP1-201ENST00000486325 ERBB3P21860 1342 aa17.44■□□□□ 0.38
VTI1BP1-201ENST00000486325 FAM83GA6ND36 823 aa17.43■□□□□ 0.38
VTI1BP1-201ENST00000486325 TMPOP42166 694 aaKnown RBP17.43■□□□□ 0.38
VTI1BP1-201ENST00000486325 EVA1CP58658 441 aa17.42■□□□□ 0.38
VTI1BP1-201ENST00000486325 NFE2L2Q16236 605 aa17.42■□□□□ 0.38
VTI1BP1-201ENST00000486325 AEBP1Q8IUX7 1158 aa17.42■□□□□ 0.38
VTI1BP1-201ENST00000486325 COL18A1P39060 1754 aa17.41■□□□□ 0.38
VTI1BP1-201ENST00000486325 RIPK4P57078 832 aa17.41■□□□□ 0.38
VTI1BP1-201ENST00000486325 NEUROD2Q15784 382 aa17.41■□□□□ 0.38
VTI1BP1-201ENST00000486325 PHACTR3Q96KR7 559 aa17.41■□□□□ 0.38
VTI1BP1-201ENST00000486325 NLRP2Q9NX02 1062 aa17.41■□□□□ 0.38
VTI1BP1-201ENST00000486325 SPATA31A6Q5VVP1 1343 aa17.41■□□□□ 0.38
VTI1BP1-201ENST00000486325 RGPD1P0DJD0 1748 aa17.41■□□□□ 0.38
VTI1BP1-201ENST00000486325 LMOD3Q0VAK6 560 aa17.4■□□□□ 0.38
VTI1BP1-201ENST00000486325 WDR63Q8IWG1 891 aa17.4■□□□□ 0.38
VTI1BP1-201ENST00000486325 HSPA1LP34931 641 aa17.39■□□□□ 0.37
VTI1BP1-201ENST00000486325 GOLGA2Q08379 1002 aa17.39■□□□□ 0.37
VTI1BP1-201ENST00000486325 WWC1Q8IX03 1113 aa17.39■□□□□ 0.37
VTI1BP1-201ENST00000486325 GAS2L2Q8NHY3 880 aa17.39■□□□□ 0.37
VTI1BP1-201ENST00000486325 PHF23Q9BUL5 403 aaPredicted RBP17.39■□□□□ 0.37
VTI1BP1-201ENST00000486325 WDR17Q8IZU2 1322 aa17.39■□□□□ 0.37
VTI1BP1-201ENST00000486325 ABCA3Q99758 1704 aa17.38■□□□□ 0.37
VTI1BP1-201ENST00000486325 SENP3-EIF4A1A0A087X0R7 540 aa17.38■□□□□ 0.37
VTI1BP1-201ENST00000486325 NUTM2BA6NNL0 878 aaPredicted RBP17.38■□□□□ 0.37
VTI1BP1-201ENST00000486325 NUTM2EB1AL46 878 aaPredicted RBP17.38■□□□□ 0.37
VTI1BP1-201ENST00000486325 AMOTQ4VCS5 1084 aa17.38■□□□□ 0.37
VTI1BP1-201ENST00000486325 NUTM2AQ8IVF1 878 aaPredicted RBP17.38■□□□□ 0.37
VTI1BP1-201ENST00000486325 RRP7AQ9Y3A4 280 aaKnown RBP17.38■□□□□ 0.37
VTI1BP1-201ENST00000486325 ZNF521Q96K83 1311 aa17.38■□□□□ 0.37
VTI1BP1-201ENST00000486325 ADAMTS2O95450 1211 aa17.37■□□□□ 0.37
VTI1BP1-201ENST00000486325 CALD1Q05682 793 aaKnown RBP17.37■□□□□ 0.37
VTI1BP1-201ENST00000486325 PLEKHO1Q53GL0 409 aaPredicted RBP17.37■□□□□ 0.37
VTI1BP1-201ENST00000486325 TOM1L2Q6ZVM7 507 aa17.37■□□□□ 0.37
VTI1BP1-201ENST00000486325 CARD10Q9BWT7 1032 aa17.37■□□□□ 0.37
VTI1BP1-201ENST00000486325 BTG4Q9NY30 223 aa17.37■□□□□ 0.37
VTI1BP1-201ENST00000486325 NCAPD2Q15021 1401 aa17.37■□□□□ 0.37
VTI1BP1-201ENST00000486325 CAMTA1Q9Y6Y1 1673 aa17.36■□□□□ 0.37
VTI1BP1-201ENST00000486325 HTATSF1O43719 755 aaKnown RBP17.36■□□□□ 0.37
VTI1BP1-201ENST00000486325 USHBP1Q8N6Y0 703 aa17.36■□□□□ 0.37
VTI1BP1-201ENST00000486325 RAPGEF4Q8WZA2 1011 aa17.36■□□□□ 0.37
VTI1BP1-201ENST00000486325 PLEKHG2Q9H7P9 1386 aa17.36■□□□□ 0.37
VTI1BP1-201ENST00000486325 RGPD5Q99666 1765 aa17.35■□□□□ 0.37
VTI1BP1-201ENST00000486325 COL14A1Q05707 1796 aaKnown RBP17.35■□□□□ 0.37
VTI1BP1-201ENST00000486325 E9PSI1 815 aa17.34■□□□□ 0.37
VTI1BP1-201ENST00000486325 TATP17735 454 aaPredicted RBP17.34■□□□□ 0.37
VTI1BP1-201ENST00000486325 MTHFSDQ2M296 383 aaKnown RBP17.34■□□□□ 0.37
VTI1BP1-201ENST00000486325 LMO7Q8WWI1 1683 aa17.34■□□□□ 0.37
VTI1BP1-201ENST00000486325 STRN4Q9NRL3 753 aa17.34■□□□□ 0.37
VTI1BP1-201ENST00000486325 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.34■□□□□ 0.37
VTI1BP1-201ENST00000486325 TRIM35Q9UPQ4 493 aa17.34■□□□□ 0.37
VTI1BP1-201ENST00000486325 FAM208AQ9UK61 1670 aaKnown RBP17.33■□□□□ 0.37
VTI1BP1-201ENST00000486325 COL5A2P05997 1499 aaPredicted RBP17.33■□□□□ 0.37
VTI1BP1-201ENST00000486325 IL16Q14005 1332 aa17.33■□□□□ 0.36
VTI1BP1-201ENST00000486325 RTF1Q92541 710 aaKnown RBP17.33■□□□□ 0.36
VTI1BP1-201ENST00000486325 SLFN5Q08AF3 891 aa17.32■□□□□ 0.36
VTI1BP1-201ENST00000486325 GNAT3A8MTJ3 354 aa17.31■□□□□ 0.36
VTI1BP1-201ENST00000486325 LARP1Q6PKG0 1096 aaKnown RBP17.31■□□□□ 0.36
VTI1BP1-201ENST00000486325 NGLY1Q96IV0 654 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms