RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 SBF2Q86WG5 1849 aa16.86■□□□□ 0.29
HLA-DOA-204ENST00000485901 SPON1Q9HCB6 807 aa16.86■□□□□ 0.29
HLA-DOA-204ENST00000485901 QRICH2Q9H0J4 1663 aa16.85■□□□□ 0.29
HLA-DOA-204ENST00000485901 ST20-MTHFSA0A0A6YYL1 179 aa16.85■□□□□ 0.29
HLA-DOA-204ENST00000485901 NLRP6P59044 892 aa16.85■□□□□ 0.29
HLA-DOA-204ENST00000485901 KCNH5Q8NCM2 988 aa16.85■□□□□ 0.29
HLA-DOA-204ENST00000485901 SBNO2Q9Y2G9 1366 aa16.85■□□□□ 0.29
HLA-DOA-204ENST00000485901 PEAK1Q9H792 1746 aa16.84■□□□□ 0.29
HLA-DOA-204ENST00000485901 DCAF8L1A6NGE4 600 aa16.84■□□□□ 0.29
HLA-DOA-204ENST00000485901 KCNQ2O43526 872 aa16.84■□□□□ 0.29
HLA-DOA-204ENST00000485901 DDB1Q16531 1140 aa16.84■□□□□ 0.29
HLA-DOA-204ENST00000485901 NINLQ9Y2I6 1382 aa16.84■□□□□ 0.29
HLA-DOA-204ENST00000485901 COL18A1P39060 1754 aa16.83■□□□□ 0.28
HLA-DOA-204ENST00000485901 BCL11BQ9C0K0 894 aaPredicted RBP16.83■□□□□ 0.28
HLA-DOA-204ENST00000485901 CABP1Q9NZU7 370 aa16.83■□□□□ 0.28
HLA-DOA-204ENST00000485901 WDR17Q8IZU2 1322 aa16.82■□□□□ 0.28
HLA-DOA-204ENST00000485901 TTC21AQ8NDW8 1320 aa16.81■□□□□ 0.28
HLA-DOA-204ENST00000485901 TOM1L2Q6ZVM7 507 aa16.81■□□□□ 0.28
HLA-DOA-204ENST00000485901 PUS7Q96PZ0 661 aaKnown RBP16.81■□□□□ 0.28
HLA-DOA-204ENST00000485901 ABCC6O95255 1503 aa16.8■□□□□ 0.28
HLA-DOA-204ENST00000485901 USP47Q96K76 1375 aa16.8■□□□□ 0.28
HLA-DOA-204ENST00000485901 ARHGEF25Q86VW2 580 aa16.8■□□□□ 0.28
HLA-DOA-204ENST00000485901 TESK2Q96S53 571 aa16.8■□□□□ 0.28
HLA-DOA-204ENST00000485901 LRRC37A3O60309 1634 aa16.79■□□□□ 0.28
HLA-DOA-204ENST00000485901 CARD10Q9BWT7 1032 aa16.79■□□□□ 0.28
HLA-DOA-204ENST00000485901 PPP1R1BQ9UD71 204 aaPredicted RBP16.79■□□□□ 0.28
HLA-DOA-204ENST00000485901 WNK3Q9BYP7 1800 aa16.79■□□□□ 0.28
HLA-DOA-204ENST00000485901 AKAP12Q02952 1782 aa16.78■□□□□ 0.28
HLA-DOA-204ENST00000485901 PIK3C2AO00443 1686 aa16.78■□□□□ 0.28
HLA-DOA-204ENST00000485901 CPSF1Q10570 1443 aaKnown RBP16.78■□□□□ 0.28
HLA-DOA-204ENST00000485901 CCDC7Q96M83 1385 aa16.77■□□□□ 0.27
HLA-DOA-204ENST00000485901 TTC21BQ7Z4L5 1316 aa16.76■□□□□ 0.27
HLA-DOA-204ENST00000485901 YY1P25490 414 aa16.76■□□□□ 0.27
HLA-DOA-204ENST00000485901 TMF1P82094 1093 aa16.76■□□□□ 0.27
HLA-DOA-204ENST00000485901 EXOC5O00471 708 aa16.75■□□□□ 0.27
HLA-DOA-204ENST00000485901 TMC1Q8TDI8 760 aa16.75■□□□□ 0.27
HLA-DOA-204ENST00000485901 AXIN2Q9Y2T1 843 aa16.75■□□□□ 0.27
HLA-DOA-204ENST00000485901 CDCA8Q53HL2 280 aa16.74■□□□□ 0.27
HLA-DOA-204ENST00000485901 MARCH10Q8NA82 808 aaPredicted RBP16.74■□□□□ 0.27
HLA-DOA-204ENST00000485901 CASZ1Q86V15 1759 aa16.74■□□□□ 0.27
HLA-DOA-204ENST00000485901 EIF4G2P78344 907 aaKnown RBP eCLIP16.73■□□□□ 0.27
HLA-DOA-204ENST00000485901 RGPD5Q99666 1765 aa16.72■□□□□ 0.27
HLA-DOA-204ENST00000485901 SLC12A5Q9H2X9 1139 aa16.72■□□□□ 0.27
HLA-DOA-204ENST00000485901 HDGFL2Q7Z4V5 671 aaPredicted RBP16.71■□□□□ 0.27
HLA-DOA-204ENST00000485901 PROM2Q8N271 834 aa16.71■□□□□ 0.27
HLA-DOA-204ENST00000485901 USP31Q70CQ4 1352 aa16.71■□□□□ 0.27
HLA-DOA-204ENST00000485901 USP54Q70EL1 1684 aa16.71■□□□□ 0.27
HLA-DOA-204ENST00000485901 ZBTB7CA1YPR0 619 aa16.7■□□□□ 0.26
HLA-DOA-204ENST00000485901 CSB-PGBD3P0DP91 1061 aa16.7■□□□□ 0.26
HLA-DOA-204ENST00000485901 TERF2IPQ9NYB0 399 aa16.7■□□□□ 0.26
HLA-DOA-204ENST00000485901 NFAT5O94916 1531 aa16.7■□□□□ 0.26
HLA-DOA-204ENST00000485901 KTN1Q86UP2 1357 aaKnown RBP16.69■□□□□ 0.26
HLA-DOA-204ENST00000485901 TXNRD1Q16881 649 aa16.69■□□□□ 0.26
HLA-DOA-204ENST00000485901 STK32BQ9NY57 414 aa16.69■□□□□ 0.26
HLA-DOA-204ENST00000485901 TNS2Q63HR2 1409 aa16.69■□□□□ 0.26
HLA-DOA-204ENST00000485901 HSPA5P11021 654 aaKnown RBP16.68■□□□□ 0.26
HLA-DOA-204ENST00000485901 SLC15A2Q16348 729 aa16.68■□□□□ 0.26
HLA-DOA-204ENST00000485901 ANO8Q9HCE9 1232 aaPredicted RBP16.68■□□□□ 0.26
HLA-DOA-204ENST00000485901 MON2Q7Z3U7 1717 aa16.67■□□□□ 0.26
HLA-DOA-204ENST00000485901 KAT6BQ8WYB5 2073 aa16.67■□□□□ 0.26
HLA-DOA-204ENST00000485901 UTRNP46939 3433 aa16.66■□□□□ 0.26
HLA-DOA-204ENST00000485901 MTFR1LQ9H019 292 aa16.66■□□□□ 0.26
HLA-DOA-204ENST00000485901 NHSQ6T4R5 1651 aa16.65■□□□□ 0.26
HLA-DOA-204ENST00000485901 CHD4Q14839 1912 aa16.65■□□□□ 0.26
HLA-DOA-204ENST00000485901 PTGER2P43116 358 aa16.65■□□□□ 0.26
HLA-DOA-204ENST00000485901 ERBB3P21860 1342 aa16.65■□□□□ 0.26
HLA-DOA-204ENST00000485901 IL2RBP14784 551 aa16.63■□□□□ 0.25
HLA-DOA-204ENST00000485901 PTF1AQ7RTS3 328 aa16.63■□□□□ 0.25
HLA-DOA-204ENST00000485901 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.63■□□□□ 0.25
HLA-DOA-204ENST00000485901 MAP3K5Q99683 1374 aa16.63■□□□□ 0.25
HLA-DOA-204ENST00000485901 CD163L1Q9NR16 1453 aa16.62■□□□□ 0.25
HLA-DOA-204ENST00000485901 SLC16A10Q8TF71 515 aa16.61■□□□□ 0.25
HLA-DOA-204ENST00000485901 SGIP1Q9BQI5 828 aa16.61■□□□□ 0.25
HLA-DOA-204ENST00000485901 SYT17Q9BSW7 474 aa16.61■□□□□ 0.25
HLA-DOA-204ENST00000485901 A0A1W2PP64 1363 aa16.61■□□□□ 0.25
HLA-DOA-204ENST00000485901 LTN1O94822 1766 aa16.61■□□□□ 0.25
HLA-DOA-204ENST00000485901 EDC4Q6P2E9 1401 aaKnown RBP16.61■□□□□ 0.25
HLA-DOA-204ENST00000485901 ZBTB7AO95365 584 aa16.6■□□□□ 0.25
HLA-DOA-204ENST00000485901 HMGB2P26583 209 aaKnown RBP16.6■□□□□ 0.25
HLA-DOA-204ENST00000485901 ANKRD36BQ8N2N9 1353 aa16.6■□□□□ 0.25
HLA-DOA-204ENST00000485901 MYOM1P52179 1685 aa16.59■□□□□ 0.25
HLA-DOA-204ENST00000485901 FAM208AQ9UK61 1670 aaKnown RBP16.59■□□□□ 0.25
HLA-DOA-204ENST00000485901 SLC27A3Q5K4L6 730 aa16.59■□□□□ 0.25
HLA-DOA-204ENST00000485901 POLR3GLQ9BT43 218 aa16.59■□□□□ 0.25
HLA-DOA-204ENST00000485901 NLRP2Q9NX02 1062 aa16.59■□□□□ 0.25
HLA-DOA-204ENST00000485901 QSER1Q2KHR3 1735 aa16.59■□□□□ 0.25
HLA-DOA-204ENST00000485901 SOX12O15370 315 aa16.58■□□□□ 0.24
HLA-DOA-204ENST00000485901 PDGFDQ9GZP0 370 aaPredicted RBP16.58■□□□□ 0.24
HLA-DOA-204ENST00000485901 PAPPAQ13219 1627 aa16.58■□□□□ 0.24
HLA-DOA-204ENST00000485901 BTAF1O14981 1849 aa16.57■□□□□ 0.24
HLA-DOA-204ENST00000485901 NME9Q86XW9 330 aa16.57■□□□□ 0.24
HLA-DOA-204ENST00000485901 FHDC1Q9C0D6 1143 aaPredicted RBP16.57■□□□□ 0.24
HLA-DOA-204ENST00000485901 ATF5Q9Y2D1 282 aaPredicted RBP16.57■□□□□ 0.24
HLA-DOA-204ENST00000485901 ANKRD24Q8TF21 1146 aa16.56■□□□□ 0.24
HLA-DOA-204ENST00000485901 IP6K1Q92551 441 aa16.56■□□□□ 0.24
HLA-DOA-204ENST00000485901 ARXQ96QS3 562 aa16.56■□□□□ 0.24
HLA-DOA-204ENST00000485901 COL24A1Q17RW2 1714 aa16.54■□□□□ 0.24
HLA-DOA-204ENST00000485901 ZNF784Q8NCA9 323 aaPredicted RBP16.53■□□□□ 0.24
HLA-DOA-204ENST00000485901 COG3Q96JB2 828 aa16.53■□□□□ 0.24
HLA-DOA-204ENST00000485901 ACSBG1Q96GR2 724 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms