RNA–Protein interactions for RNA: ENST00000485515.5

SDHB-207, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 5

Gene SDHB, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-207ENST00000485515 COL5A2P05997 1499 aaPredicted RBP17.4■□□□□ 0.38
SDHB-207ENST00000485515 TCP11L2Q8N4U5 519 aa17.4■□□□□ 0.38
SDHB-207ENST00000485515 NSD3Q9BZ95 1437 aa17.39■□□□□ 0.38
SDHB-207ENST00000485515 USP54Q70EL1 1684 aa17.39■□□□□ 0.37
SDHB-207ENST00000485515 LMO7Q8WWI1 1683 aa17.39■□□□□ 0.37
SDHB-207ENST00000485515 NFAT5O94916 1531 aa17.39■□□□□ 0.37
SDHB-207ENST00000485515 KRT27Q7Z3Y8 459 aa17.39■□□□□ 0.37
SDHB-207ENST00000485515 CARD14Q9BXL6 1004 aa17.39■□□□□ 0.37
SDHB-207ENST00000485515 BARGINQ6ZT62 677 aa17.38■□□□□ 0.37
SDHB-207ENST00000485515 UPF1Q92900 1129 aaKnown RBP eCLIP17.38■□□□□ 0.37
SDHB-207ENST00000485515 AXIN2Q9Y2T1 843 aa17.38■□□□□ 0.37
SDHB-207ENST00000485515 WDR17Q8IZU2 1322 aa17.38■□□□□ 0.37
SDHB-207ENST00000485515 CRB1P82279 1406 aa17.38■□□□□ 0.37
SDHB-207ENST00000485515 ABCC6O95255 1503 aa17.37■□□□□ 0.37
SDHB-207ENST00000485515 MYOM1P52179 1685 aa17.37■□□□□ 0.37
SDHB-207ENST00000485515 AMPHP49418 695 aa17.37■□□□□ 0.37
SDHB-207ENST00000485515 PANK3Q9H999 370 aa17.37■□□□□ 0.37
SDHB-207ENST00000485515 CCDC125Q86Z20 511 aa17.35■□□□□ 0.37
SDHB-207ENST00000485515 C11orf95C9JLR9 678 aaPredicted RBP17.34■□□□□ 0.37
SDHB-207ENST00000485515 PDE3BQ13370 1112 aa17.34■□□□□ 0.37
SDHB-207ENST00000485515 KIF7Q2M1P5 1343 aa17.34■□□□□ 0.37
SDHB-207ENST00000485515 IP6K1Q92551 441 aa17.34■□□□□ 0.37
SDHB-207ENST00000485515 CDCA7Q9BWT1 371 aaPredicted RBP17.34■□□□□ 0.37
SDHB-207ENST00000485515 KNSTRNQ9Y448 316 aa17.34■□□□□ 0.37
SDHB-207ENST00000485515 BLMP54132 1417 aaPredicted RBP17.33■□□□□ 0.36
SDHB-207ENST00000485515 SF3B2Q13435 895 aaKnown RBP17.33■□□□□ 0.36
SDHB-207ENST00000485515 CARD10Q9BWT7 1032 aa17.33■□□□□ 0.36
SDHB-207ENST00000485515 COL18A1P39060 1754 aa17.33■□□□□ 0.36
SDHB-207ENST00000485515 MAP3K19Q56UN5 1328 aa17.32■□□□□ 0.36
SDHB-207ENST00000485515 ANKRD24Q8TF21 1146 aa17.32■□□□□ 0.36
SDHB-207ENST00000485515 NLRP2Q9NX02 1062 aa17.32■□□□□ 0.36
SDHB-207ENST00000485515 KIF20BQ96Q89 1820 aa17.32■□□□□ 0.36
SDHB-207ENST00000485515 LTN1O94822 1766 aa17.32■□□□□ 0.36
SDHB-207ENST00000485515 CCDC7Q96M83 1385 aa17.31■□□□□ 0.36
SDHB-207ENST00000485515 ERBB3P21860 1342 aa17.31■□□□□ 0.36
SDHB-207ENST00000485515 HOXC9P31274 260 aa17.3■□□□□ 0.36
SDHB-207ENST00000485515 RRS1Q15050 365 aaKnown RBP17.3■□□□□ 0.36
SDHB-207ENST00000485515 RTL1A6NKG5 1358 aa17.29■□□□□ 0.36
SDHB-207ENST00000485515 NSD2O96028 1365 aa17.29■□□□□ 0.36
SDHB-207ENST00000485515 FBLN1P23142 703 aa17.29■□□□□ 0.36
SDHB-207ENST00000485515 DDB1Q16531 1140 aa17.29■□□□□ 0.36
SDHB-207ENST00000485515 LTV1Q96GA3 475 aaPredicted RBP17.29■□□□□ 0.36
SDHB-207ENST00000485515 BRWD3Q6RI45 1802 aa17.28■□□□□ 0.36
SDHB-207ENST00000485515 RGPD5Q99666 1765 aa17.28■□□□□ 0.36
SDHB-207ENST00000485515 FAM196AQ6ZSG2 479 aa17.28■□□□□ 0.36
SDHB-207ENST00000485515 THSD7AQ9UPZ6 1657 aa17.28■□□□□ 0.36
SDHB-207ENST00000485515 SMG6Q86US8 1419 aaKnown RBP17.28■□□□□ 0.36
SDHB-207ENST00000485515 KIF24Q5T7B8 1368 aa17.28■□□□□ 0.36
SDHB-207ENST00000485515 PPM1GO15355 546 aaPredicted RBP17.27■□□□□ 0.36
SDHB-207ENST00000485515 EXOC5O00471 708 aa17.26■□□□□ 0.35
SDHB-207ENST00000485515 ZEB1P37275 1124 aaPredicted RBP17.26■□□□□ 0.35
SDHB-207ENST00000485515 MORC1Q86VD1 984 aa17.26■□□□□ 0.35
SDHB-207ENST00000485515 FLT4P35916 1363 aa17.26■□□□□ 0.35
SDHB-207ENST00000485515 TNNT2P45379 298 aaPredicted RBP17.25■□□□□ 0.35
SDHB-207ENST00000485515 EP400Q96L91 3159 aa17.25■□□□□ 0.35
SDHB-207ENST00000485515 WASHC2AQ641Q2 1341 aa17.24■□□□□ 0.35
SDHB-207ENST00000485515 IL2RBP14784 551 aa17.24■□□□□ 0.35
SDHB-207ENST00000485515 FAM182BQ5T319 152 aa17.24■□□□□ 0.35
SDHB-207ENST00000485515 INSRP06213 1382 aa17.23■□□□□ 0.35
SDHB-207ENST00000485515 HSP90AB2PQ58FF8 381 aa17.22■□□□□ 0.35
SDHB-207ENST00000485515 EMILIN1Q9Y6C2 1016 aa17.22■□□□□ 0.35
SDHB-207ENST00000485515 FAM208AQ9UK61 1670 aaKnown RBP17.21■□□□□ 0.35
SDHB-207ENST00000485515 BAG6P46379 1132 aa17.21■□□□□ 0.35
SDHB-207ENST00000485515 PARP4Q9UKK3 1724 aaKnown RBP17.21■□□□□ 0.35
SDHB-207ENST00000485515 POLKQ9UBT6 870 aa17.2■□□□□ 0.34
SDHB-207ENST00000485515 OVOS2A0A0G2JMS6 1433 aa17.19■□□□□ 0.34
SDHB-207ENST00000485515 ANKRD26Q9UPS8 1709 aa17.18■□□□□ 0.34
SDHB-207ENST00000485515 TRIM37O94972 964 aa17.18■□□□□ 0.34
SDHB-207ENST00000485515 AMER1Q5JTC6 1135 aaPredicted RBP17.18■□□□□ 0.34
SDHB-207ENST00000485515 RAPGEF4Q8WZA2 1011 aa17.18■□□□□ 0.34
SDHB-207ENST00000485515 DISP2A7MBM2 1401 aa17.18■□□□□ 0.34
SDHB-207ENST00000485515 PER1O15534 1290 aaPredicted RBP17.17■□□□□ 0.34
SDHB-207ENST00000485515 CC2D1BQ5T0F9 858 aaKnown RBP17.17■□□□□ 0.34
SDHB-207ENST00000485515 NBPF6Q5VWK0 638 aa17.16■□□□□ 0.34
SDHB-207ENST00000485515 NBPF4Q96M43 638 aa17.16■□□□□ 0.34
SDHB-207ENST00000485515 LRRC37A3O60309 1634 aa17.16■□□□□ 0.34
SDHB-207ENST00000485515 MAP2P11137 1827 aaKnown RBP17.16■□□□□ 0.34
SDHB-207ENST00000485515 TNS2Q63HR2 1409 aa17.15■□□□□ 0.34
SDHB-207ENST00000485515 WNK3Q9BYP7 1800 aa17.15■□□□□ 0.34
SDHB-207ENST00000485515 MARCH10Q8NA82 808 aaPredicted RBP17.15■□□□□ 0.34
SDHB-207ENST00000485515 APBA3O96018 575 aa17.14■□□□□ 0.33
SDHB-207ENST00000485515 TATP17735 454 aaPredicted RBP17.14■□□□□ 0.33
SDHB-207ENST00000485515 DEFB132Q7Z7B7 95 aa17.14■□□□□ 0.33
SDHB-207ENST00000485515 RGPD1P0DJD0 1748 aa17.13■□□□□ 0.33
SDHB-207ENST00000485515 PEAK1Q9H792 1746 aa17.13■□□□□ 0.33
SDHB-207ENST00000485515 CNGB1Q14028 1251 aaPredicted RBP17.13■□□□□ 0.33
SDHB-207ENST00000485515 USHBP1Q8N6Y0 703 aa17.13■□□□□ 0.33
SDHB-207ENST00000485515 NPC1L1Q9UHC9 1359 aa17.13■□□□□ 0.33
SDHB-207ENST00000485515 ZCRB1Q8TBF4 217 aaKnown RBP17.12■□□□□ 0.33
SDHB-207ENST00000485515 DDX54Q8TDD1 881 aaKnown RBP17.12■□□□□ 0.33
SDHB-207ENST00000485515 BCL11BQ9C0K0 894 aaPredicted RBP17.11■□□□□ 0.33
SDHB-207ENST00000485515 BCL9O00512 1426 aa17.11■□□□□ 0.33
SDHB-207ENST00000485515 EN1Q05925 392 aaPredicted RBP17.1■□□□□ 0.33
SDHB-207ENST00000485515 EIF4A2Q14240 407 aaKnown RBP17.1■□□□□ 0.33
SDHB-207ENST00000485515 EYA1Q99502 592 aa17.09■□□□□ 0.33
SDHB-207ENST00000485515 PARD3Q8TEW0 1356 aa17.08■□□□□ 0.32
SDHB-207ENST00000485515 MTHFSP49914 203 aa17.08■□□□□ 0.32
SDHB-207ENST00000485515 SPG7Q9UQ90 795 aa17.08■□□□□ 0.32
SDHB-207ENST00000485515 RGPD2P0DJD1 1756 aa17.07■□□□□ 0.32
SDHB-207ENST00000485515 PCDH11XQ9BZA7 1347 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms