RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 KAT6BQ8WYB5 2073 aa19■□□□□ 0.63
UBA3-210ENST00000485424 CASZ1Q86V15 1759 aa18.99■□□□□ 0.63
UBA3-210ENST00000485424 L3MBTL2Q969R5 705 aa18.99■□□□□ 0.63
UBA3-210ENST00000485424 PDE3BQ13370 1112 aa18.98■□□□□ 0.63
UBA3-210ENST00000485424 APBA3O96018 575 aa18.97■□□□□ 0.63
UBA3-210ENST00000485424 SIN3AQ96ST3 1273 aa18.97■□□□□ 0.63
UBA3-210ENST00000485424 THRAP3Q9Y2W1 955 aaKnown RBP18.97■□□□□ 0.63
UBA3-210ENST00000485424 NFAT5O94916 1531 aa18.96■□□□□ 0.63
UBA3-210ENST00000485424 OVOS2A0A0G2JMS6 1433 aa18.96■□□□□ 0.63
UBA3-210ENST00000485424 OVOS2A0A0J9YW53 1432 aa18.96■□□□□ 0.63
UBA3-210ENST00000485424 OVOS2Q6IE36 1432 aa18.96■□□□□ 0.63
UBA3-210ENST00000485424 ROCK2O75116 1388 aaKnown RBP18.95■□□□□ 0.62
UBA3-210ENST00000485424 AATKQ6ZMQ8 1374 aa18.95■□□□□ 0.62
UBA3-210ENST00000485424 CPSF1Q10570 1443 aaKnown RBP18.95■□□□□ 0.62
UBA3-210ENST00000485424 CABP1Q9NZU7 370 aa18.95■□□□□ 0.62
UBA3-210ENST00000485424 ABCC6O95255 1503 aa18.95■□□□□ 0.62
UBA3-210ENST00000485424 EVC2Q86UK5 1308 aa18.94■□□□□ 0.62
UBA3-210ENST00000485424 NLRP6P59044 892 aa18.93■□□□□ 0.62
UBA3-210ENST00000485424 NHSQ6T4R5 1651 aa18.92■□□□□ 0.62
UBA3-210ENST00000485424 ZBTB7CA1YPR0 619 aa18.92■□□□□ 0.62
UBA3-210ENST00000485424 BTAF1O14981 1849 aa18.9■□□□□ 0.62
UBA3-210ENST00000485424 FAM208AQ9UK61 1670 aaKnown RBP18.89■□□□□ 0.61
UBA3-210ENST00000485424 WDR17Q8IZU2 1322 aa18.88■□□□□ 0.61
UBA3-210ENST00000485424 RGPD2P0DJD1 1756 aa18.87■□□□□ 0.61
UBA3-210ENST00000485424 MYOM1P52179 1685 aa18.87■□□□□ 0.61
UBA3-210ENST00000485424 TTC21BQ7Z4L5 1316 aa18.87■□□□□ 0.61
UBA3-210ENST00000485424 AXIN2Q9Y2T1 843 aa18.87■□□□□ 0.61
UBA3-210ENST00000485424 C11orf95C9JLR9 678 aaPredicted RBP18.86■□□□□ 0.61
UBA3-210ENST00000485424 TOM1L2Q6ZVM7 507 aa18.86■□□□□ 0.61
UBA3-210ENST00000485424 TONSLQ96HA7 1378 aa18.85■□□□□ 0.61
UBA3-210ENST00000485424 DDB1Q16531 1140 aa18.85■□□□□ 0.61
UBA3-210ENST00000485424 NBPF14Q5TI25 921 aa18.85■□□□□ 0.61
UBA3-210ENST00000485424 CHD4Q14839 1912 aa18.84■□□□□ 0.61
UBA3-210ENST00000485424 BCL9O00512 1426 aa18.84■□□□□ 0.61
UBA3-210ENST00000485424 TTC21AQ8NDW8 1320 aa18.84■□□□□ 0.61
UBA3-210ENST00000485424 CD163L1Q9NR16 1453 aa18.84■□□□□ 0.61
UBA3-210ENST00000485424 KTN1Q86UP2 1357 aaKnown RBP18.83■□□□□ 0.61
UBA3-210ENST00000485424 SBNO2Q9Y2G9 1366 aa18.83■□□□□ 0.61
UBA3-210ENST00000485424 ARHGEF25Q86VW2 580 aa18.83■□□□□ 0.6
UBA3-210ENST00000485424 ZNF692Q9BU19 519 aaPredicted RBP18.83■□□□□ 0.6
UBA3-210ENST00000485424 TUBGCP6Q96RT7 1819 aa18.83■□□□□ 0.6
UBA3-210ENST00000485424 TNS2Q63HR2 1409 aa18.83■□□□□ 0.6
UBA3-210ENST00000485424 KCNH5Q8NCM2 988 aa18.82■□□□□ 0.6
UBA3-210ENST00000485424 QSER1Q2KHR3 1735 aa18.82■□□□□ 0.6
UBA3-210ENST00000485424 SHANK3Q9BYB0 1731 aa18.82■□□□□ 0.6
UBA3-210ENST00000485424 PAPPAQ13219 1627 aa18.82■□□□□ 0.6
UBA3-210ENST00000485424 SOX12O15370 315 aa18.81■□□□□ 0.6
UBA3-210ENST00000485424 CARD11Q9BXL7 1154 aa18.81■□□□□ 0.6
UBA3-210ENST00000485424 PLSCR1O15162 318 aa18.8■□□□□ 0.6
UBA3-210ENST00000485424 PTF1AQ7RTS3 328 aa18.8■□□□□ 0.6
UBA3-210ENST00000485424 MARCH10Q8NA82 808 aaPredicted RBP18.8■□□□□ 0.6
UBA3-210ENST00000485424 CDCA7Q9BWT1 371 aaPredicted RBP18.79■□□□□ 0.6
UBA3-210ENST00000485424 CARD10Q9BWT7 1032 aa18.79■□□□□ 0.6
UBA3-210ENST00000485424 DOT1LQ8TEK3 1739 aa18.79■□□□□ 0.6
UBA3-210ENST00000485424 BCL11BQ9C0K0 894 aaPredicted RBP18.78■□□□□ 0.6
UBA3-210ENST00000485424 ANO8Q9HCE9 1232 aaPredicted RBP18.78■□□□□ 0.6
UBA3-210ENST00000485424 CCDC7Q96M83 1385 aa18.78■□□□□ 0.6
UBA3-210ENST00000485424 CSB-PGBD3P0DP91 1061 aa18.77■□□□□ 0.6
UBA3-210ENST00000485424 SPON1Q9HCB6 807 aa18.77■□□□□ 0.6
UBA3-210ENST00000485424 USP31Q70CQ4 1352 aa18.77■□□□□ 0.6
UBA3-210ENST00000485424 KCNQ2O43526 872 aa18.76■□□□□ 0.59
UBA3-210ENST00000485424 NINLQ9Y2I6 1382 aa18.76■□□□□ 0.59
UBA3-210ENST00000485424 KIF20BQ96Q89 1820 aa18.76■□□□□ 0.59
UBA3-210ENST00000485424 LY75O60449 1722 aa18.75■□□□□ 0.59
UBA3-210ENST00000485424 UTRNP46939 3433 aa18.75■□□□□ 0.59
UBA3-210ENST00000485424 COL24A1Q17RW2 1714 aa18.74■□□□□ 0.59
UBA3-210ENST00000485424 TMC1Q8TDI8 760 aa18.74■□□□□ 0.59
UBA3-210ENST00000485424 PPP1R1BQ9UD71 204 aaPredicted RBP18.74■□□□□ 0.59
UBA3-210ENST00000485424 EDC4Q6P2E9 1401 aaKnown RBP18.74■□□□□ 0.59
UBA3-210ENST00000485424 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.73■□□□□ 0.59
UBA3-210ENST00000485424 PROM2Q8N271 834 aa18.73■□□□□ 0.59
UBA3-210ENST00000485424 ERBB3P21860 1342 aa18.73■□□□□ 0.59
UBA3-210ENST00000485424 HDGFL2Q7Z4V5 671 aaPredicted RBP18.72■□□□□ 0.59
UBA3-210ENST00000485424 TRIM26Q12899 539 aaPredicted RBP18.71■□□□□ 0.59
UBA3-210ENST00000485424 NME9Q86XW9 330 aa18.71■□□□□ 0.59
UBA3-210ENST00000485424 PDGFDQ9GZP0 370 aaPredicted RBP18.71■□□□□ 0.59
UBA3-210ENST00000485424 A0A1W2PP64 1363 aa18.7■□□□□ 0.58
UBA3-210ENST00000485424 EXOC5O00471 708 aa18.7■□□□□ 0.58
UBA3-210ENST00000485424 TXNRD1Q16881 649 aa18.68■□□□□ 0.58
UBA3-210ENST00000485424 TERF2IPQ9NYB0 399 aa18.67■□□□□ 0.58
UBA3-210ENST00000485424 TAF1LQ8IZX4 1826 aa18.66■□□□□ 0.58
UBA3-210ENST00000485424 YY1P25490 414 aa18.66■□□□□ 0.58
UBA3-210ENST00000485424 SLC12A5Q9H2X9 1139 aa18.66■□□□□ 0.58
UBA3-210ENST00000485424 NLRP2Q9NX02 1062 aa18.66■□□□□ 0.58
UBA3-210ENST00000485424 SLC24A1O60721 1099 aa18.65■□□□□ 0.58
UBA3-210ENST00000485424 ZBTB7AO95365 584 aa18.65■□□□□ 0.58
UBA3-210ENST00000485424 ITGB4P16144 1822 aa18.65■□□□□ 0.58
UBA3-210ENST00000485424 IL2RBP14784 551 aa18.64■□□□□ 0.57
UBA3-210ENST00000485424 ANKRD24Q8TF21 1146 aa18.64■□□□□ 0.57
UBA3-210ENST00000485424 STK32BQ9NY57 414 aa18.64■□□□□ 0.57
UBA3-210ENST00000485424 PTGER2P43116 358 aa18.63■□□□□ 0.57
UBA3-210ENST00000485424 SLC15A2Q16348 729 aa18.63■□□□□ 0.57
UBA3-210ENST00000485424 ACSBG1Q96GR2 724 aa18.63■□□□□ 0.57
UBA3-210ENST00000485424 GOLGB1Q14789 3259 aaKnown RBP18.63■□□□□ 0.57
UBA3-210ENST00000485424 PUS7Q96PZ0 661 aaKnown RBP18.62■□□□□ 0.57
UBA3-210ENST00000485424 C5P01031 1676 aa18.62■□□□□ 0.57
UBA3-210ENST00000485424 MAP2P11137 1827 aaKnown RBP18.6■□□□□ 0.57
UBA3-210ENST00000485424 ST20-MTHFSA0A0A6YYL1 179 aa18.6■□□□□ 0.57
UBA3-210ENST00000485424 ATF5Q9Y2D1 282 aaPredicted RBP18.6■□□□□ 0.57
UBA3-210ENST00000485424 ANKRD26Q9UPS8 1709 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms