RNA–Protein interactions for RNA: ENST00000484790.5

FXR1-218, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 4

Gene FXR1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-218ENST00000484790 NCOA4Q13772 614 aa11.49□□□□□ -0.57
FXR1-218ENST00000484790 TSGA10IPQ3SY00 556 aa11.49□□□□□ -0.57
FXR1-218ENST00000484790 ANKLE1Q8NAG6 615 aa11.49□□□□□ -0.57
FXR1-218ENST00000484790 SLC10A4Q96EP9 437 aa11.49□□□□□ -0.57
FXR1-218ENST00000484790 GIGYF1O75420 1035 aaPredicted RBP11.48□□□□□ -0.57
FXR1-218ENST00000484790 GGCXP38435 758 aa11.48□□□□□ -0.57
FXR1-218ENST00000484790 TRIM32Q13049 653 aa11.48□□□□□ -0.57
FXR1-218ENST00000484790 USTQ9Y2C2 406 aa11.48□□□□□ -0.57
FXR1-218ENST00000484790 PDE4CQ08493 712 aa11.47□□□□□ -0.57
FXR1-218ENST00000484790 PPP1R18Q6NYC8 613 aa11.47□□□□□ -0.57
FXR1-218ENST00000484790 CCDC85AQ96PX6 553 aaPredicted RBP11.47□□□□□ -0.57
FXR1-218ENST00000484790 C1QTNF2Q9BXJ5 285 aa11.47□□□□□ -0.57
FXR1-218ENST00000484790 MKRN1Q9UHC7 482 aaKnown RBP11.47□□□□□ -0.57
FXR1-218ENST00000484790 CHIC2Q9UKJ5 165 aa11.46□□□□□ -0.57
FXR1-218ENST00000484790 SKOR1P84550 965 aa11.45□□□□□ -0.58
FXR1-218ENST00000484790 TRAF7Q6Q0C0 670 aa11.45□□□□□ -0.58
FXR1-218ENST00000484790 KCTD17Q8N5Z5 321 aa11.45□□□□□ -0.58
FXR1-218ENST00000484790 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.45□□□□□ -0.58
FXR1-218ENST00000484790 EML3Q32P44 896 aa11.44□□□□□ -0.58
FXR1-218ENST00000484790 MAP7D1Q3KQU3 841 aa11.44□□□□□ -0.58
FXR1-218ENST00000484790 ZMIZ1Q9ULJ6 1067 aa11.44□□□□□ -0.58
FXR1-218ENST00000484790 DOLKQ9UPQ8 538 aa11.44□□□□□ -0.58
FXR1-218ENST00000484790 TMEM88BA6NKF7 163 aa11.43□□□□□ -0.58
FXR1-218ENST00000484790 CRTC2Q53ET0 693 aaPredicted RBP11.43□□□□□ -0.58
FXR1-218ENST00000484790 OXLD1Q5BKU9 147 aa11.43□□□□□ -0.58
FXR1-218ENST00000484790 STK32AQ8WU08 396 aa11.43□□□□□ -0.58
FXR1-218ENST00000484790 NOVA2Q9UNW9 492 aaKnown RBP11.43□□□□□ -0.58
FXR1-218ENST00000484790 USP17L15C9J2P7 530 aa11.42□□□□□ -0.58
FXR1-218ENST00000484790 USP17L10C9JJH3 530 aa11.42□□□□□ -0.58
FXR1-218ENST00000484790 USP17L13C9JLJ4 530 aa11.42□□□□□ -0.58
FXR1-218ENST00000484790 USP17L12C9JPN9 530 aa11.42□□□□□ -0.58
FXR1-218ENST00000484790 USP17L11C9JVI0 530 aa11.42□□□□□ -0.58
FXR1-218ENST00000484790 USP17L21D6R901 530 aa11.42□□□□□ -0.58
FXR1-218ENST00000484790 USP17L18D6R9N7 530 aa11.42□□□□□ -0.58
FXR1-218ENST00000484790 USP17L22D6RA61 530 aa11.42□□□□□ -0.58
FXR1-218ENST00000484790 USP17L17D6RBQ6 530 aa11.42□□□□□ -0.58
FXR1-218ENST00000484790 USP17L19D6RCP7 530 aa11.42□□□□□ -0.58
FXR1-218ENST00000484790 USP17L20D6RJB6 530 aa11.42□□□□□ -0.58
FXR1-218ENST00000484790 RASA1P20936 1047 aa11.42□□□□□ -0.58
FXR1-218ENST00000484790 USP17L24Q0WX57 530 aa11.42□□□□□ -0.58
FXR1-218ENST00000484790 TRMT44Q8IYL2 757 aaKnown RBP11.42□□□□□ -0.58
FXR1-218ENST00000484790 ATP5J2-PTCD1G3V325 749 aa11.41□□□□□ -0.58
FXR1-218ENST00000484790 LZTS3O60299 673 aaPredicted RBP11.41□□□□□ -0.58
FXR1-218ENST00000484790 RAB15P59190 212 aa11.41□□□□□ -0.58
FXR1-218ENST00000484790 MMRN1Q13201 1228 aa11.41□□□□□ -0.58
FXR1-218ENST00000484790 ELOAQ14241 798 aaKnown RBP11.41□□□□□ -0.58
FXR1-218ENST00000484790 NBPF20Q3BBV1 942 aa11.41□□□□□ -0.58
FXR1-218ENST00000484790 FAM196BA6NMK8 535 aa11.4□□□□□ -0.58
FXR1-218ENST00000484790 WNT7BP56706 349 aa11.4□□□□□ -0.58
FXR1-218ENST00000484790 TMEM164Q5U3C3 297 aa11.4□□□□□ -0.58
FXR1-218ENST00000484790 RNF20Q5VTR2 975 aa11.4□□□□□ -0.58
FXR1-218ENST00000484790 LARP1Q6PKG0 1096 aaKnown RBP11.4□□□□□ -0.58
FXR1-218ENST00000484790 CDCA7Q9BWT1 371 aaPredicted RBP11.4□□□□□ -0.58
FXR1-218ENST00000484790 ESPNB1AK53 854 aa11.39□□□□□ -0.59
FXR1-218ENST00000484790 VARSP26640 1264 aaKnown RBP11.39□□□□□ -0.59
FXR1-218ENST00000484790 RPIAP49247 311 aa11.39□□□□□ -0.59
FXR1-218ENST00000484790 PTK7Q13308 1070 aa11.39□□□□□ -0.59
FXR1-218ENST00000484790 CDV3Q9UKY7 258 aaKnown RBP11.39□□□□□ -0.59
FXR1-218ENST00000484790 NOD1Q9Y239 953 aa11.39□□□□□ -0.59
FXR1-218ENST00000484790 PCDHB11Q9Y5F2 797 aa11.39□□□□□ -0.59
FXR1-218ENST00000484790 OGFOD1Q8N543 542 aa11.38□□□□□ -0.59
FXR1-218ENST00000484790 EHBP1Q8NDI1 1231 aa11.38□□□□□ -0.59
FXR1-218ENST00000484790 KCTD15Q96SI1 283 aaPredicted RBP11.38□□□□□ -0.59
FXR1-218ENST00000484790 CLDN10P78369 228 aa11.37□□□□□ -0.59
FXR1-218ENST00000484790 LIAT1Q6ZQX7 453 aa11.37□□□□□ -0.59
FXR1-218ENST00000484790 ZNF594Q96JF6 807 aaPredicted RBP11.37□□□□□ -0.59
FXR1-218ENST00000484790 BRD1O95696 1058 aa11.36□□□□□ -0.59
FXR1-218ENST00000484790 RC3H1Q5TC82 1133 aaKnown RBP11.36□□□□□ -0.59
FXR1-218ENST00000484790 VASH1Q7L8A9 365 aaPredicted RBP11.36□□□□□ -0.59
FXR1-218ENST00000484790 EMID1Q96A84 441 aaPredicted RBP11.36□□□□□ -0.59
FXR1-218ENST00000484790 CD2BP2O95400 341 aaKnown RBP11.35□□□□□ -0.59
FXR1-218ENST00000484790 ARID5BQ14865 1188 aa11.35□□□□□ -0.59
FXR1-218ENST00000484790 TRIM50Q86XT4 487 aa11.35□□□□□ -0.59
FXR1-218ENST00000484790 DNAAF2Q9NVR5 837 aaKnown RBP11.35□□□□□ -0.59
FXR1-218ENST00000484790 GTF2IP78347 998 aa11.34□□□□□ -0.59
FXR1-218ENST00000484790 DPYDQ12882 1025 aa11.34□□□□□ -0.59
FXR1-218ENST00000484790 ANKMY2Q8IV38 441 aa11.34□□□□□ -0.59
FXR1-218ENST00000484790 SEPT12Q8IYM1 358 aa11.34□□□□□ -0.59
FXR1-218ENST00000484790 FAM200AQ8TCP9 573 aa11.34□□□□□ -0.59
FXR1-218ENST00000484790 KIAA1024Q9UPX6 916 aa11.34□□□□□ -0.59
FXR1-218ENST00000484790 ATP1A2P50993 1020 aa11.33□□□□□ -0.6
FXR1-218ENST00000484790 INTS6LQ5JSJ4 861 aaKnown RBP11.33□□□□□ -0.6
FXR1-218ENST00000484790 MAP4K5Q9Y4K4 846 aa11.33□□□□□ -0.6
FXR1-218ENST00000484790 TLL2Q9Y6L7 1015 aa11.33□□□□□ -0.6
FXR1-218ENST00000484790 ERVH48-1M5A8F1 160 aa11.31□□□□□ -0.6
FXR1-218ENST00000484790 ZBTB7BO15156 539 aaPredicted RBP11.31□□□□□ -0.6
FXR1-218ENST00000484790 KCNA1Q09470 495 aa11.31□□□□□ -0.6
FXR1-218ENST00000484790 FSHRP23945 695 aa11.3□□□□□ -0.6
FXR1-218ENST00000484790 USP4Q13107 963 aa11.3□□□□□ -0.6
FXR1-218ENST00000484790 LARGE2Q8N3Y3 721 aa11.3□□□□□ -0.6
FXR1-218ENST00000484790 GZF1Q9H116 711 aaPredicted RBP11.3□□□□□ -0.6
FXR1-218ENST00000484790 DKK1O94907 266 aa11.29□□□□□ -0.6
FXR1-218ENST00000484790 SCTRP47872 440 aa11.29□□□□□ -0.6
FXR1-218ENST00000484790 PSME1Q06323 249 aa11.29□□□□□ -0.6
FXR1-218ENST00000484790 FAM69CQ0P6D2 419 aa11.29□□□□□ -0.6
FXR1-218ENST00000484790 SLAIN2Q9P270 581 aa11.29□□□□□ -0.6
FXR1-218ENST00000484790 PCDHGA11Q9Y5H2 935 aa11.29□□□□□ -0.6
FXR1-218ENST00000484790 SLC19A1P41440 591 aa11.28□□□□□ -0.6
FXR1-218ENST00000484790 CCDC102BQ68D86 513 aa11.28□□□□□ -0.6
FXR1-218ENST00000484790 CCDC125Q86Z20 511 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms