RNA–Protein interactions for RNA: ENST00000484141.5

PCGF3-211, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-211ENST00000484141 COL5A2P05997 1499 aaPredicted RBP23.62■■□□□ 1.37
PCGF3-211ENST00000484141 AXIN2Q9Y2T1 843 aa23.62■■□□□ 1.37
PCGF3-211ENST00000484141 PPP1R1BQ9UD71 204 aaPredicted RBP23.61■■□□□ 1.37
PCGF3-211ENST00000484141 NME9Q86XW9 330 aa23.6■■□□□ 1.37
PCGF3-211ENST00000484141 RREB1Q92766 1687 aa23.6■■□□□ 1.37
PCGF3-211ENST00000484141 TTC21AQ8NDW8 1320 aa23.59■■□□□ 1.37
PCGF3-211ENST00000484141 TCP11L2Q8N4U5 519 aa23.58■■□□□ 1.37
PCGF3-211ENST00000484141 SPON1Q9HCB6 807 aa23.58■■□□□ 1.37
PCGF3-211ENST00000484141 NUP188Q5SRE5 1749 aa23.58■■□□□ 1.37
PCGF3-211ENST00000484141 AATKQ6ZMQ8 1374 aa23.57■■□□□ 1.36
PCGF3-211ENST00000484141 DCAF8L1A6NGE4 600 aa23.57■■□□□ 1.36
PCGF3-211ENST00000484141 ARHGEF25Q86VW2 580 aa23.57■■□□□ 1.36
PCGF3-211ENST00000484141 NFAT5O94916 1531 aa23.57■■□□□ 1.36
PCGF3-211ENST00000484141 A0A1W2PP64 1363 aa23.56■■□□□ 1.36
PCGF3-211ENST00000484141 KCNQ2O43526 872 aa23.54■■□□□ 1.36
PCGF3-211ENST00000484141 USP47Q96K76 1375 aa23.53■■□□□ 1.36
PCGF3-211ENST00000484141 NINLQ9Y2I6 1382 aa23.52■■□□□ 1.36
PCGF3-211ENST00000484141 CRB1P82279 1406 aa23.52■■□□□ 1.36
PCGF3-211ENST00000484141 HDGFL2Q7Z4V5 671 aaPredicted RBP23.52■■□□□ 1.36
PCGF3-211ENST00000484141 THRAP3Q9Y2W1 955 aaKnown RBP23.52■■□□□ 1.36
PCGF3-211ENST00000484141 KCNH5Q8NCM2 988 aa23.51■■□□□ 1.35
PCGF3-211ENST00000484141 USP31Q70CQ4 1352 aa23.51■■□□□ 1.35
PCGF3-211ENST00000484141 USP54Q70EL1 1684 aa23.51■■□□□ 1.35
PCGF3-211ENST00000484141 TOM1L2Q6ZVM7 507 aa23.5■■□□□ 1.35
PCGF3-211ENST00000484141 PUS7Q96PZ0 661 aaKnown RBP23.49■■□□□ 1.35
PCGF3-211ENST00000484141 PARP4Q9UKK3 1724 aaKnown RBP23.49■■□□□ 1.35
PCGF3-211ENST00000484141 EDC4Q6P2E9 1401 aaKnown RBP23.49■■□□□ 1.35
PCGF3-211ENST00000484141 LTN1O94822 1766 aa23.48■■□□□ 1.35
PCGF3-211ENST00000484141 C11orf95C9JLR9 678 aaPredicted RBP23.48■■□□□ 1.35
PCGF3-211ENST00000484141 TERF2IPQ9NYB0 399 aa23.48■■□□□ 1.35
PCGF3-211ENST00000484141 WDR17Q8IZU2 1322 aa23.47■■□□□ 1.35
PCGF3-211ENST00000484141 WNK3Q9BYP7 1800 aa23.47■■□□□ 1.35
PCGF3-211ENST00000484141 FBLN1P23142 703 aa23.46■■□□□ 1.35
PCGF3-211ENST00000484141 LRRC37A3O60309 1634 aa23.45■■□□□ 1.34
PCGF3-211ENST00000484141 OVOS2A0A0G2JMS6 1433 aa23.45■■□□□ 1.34
PCGF3-211ENST00000484141 OVOS2A0A0J9YW53 1432 aa23.45■■□□□ 1.34
PCGF3-211ENST00000484141 OVOS2Q6IE36 1432 aa23.45■■□□□ 1.34
PCGF3-211ENST00000484141 CSB-PGBD3P0DP91 1061 aa23.43■■□□□ 1.34
PCGF3-211ENST00000484141 PLSCR1O15162 318 aa23.42■■□□□ 1.34
PCGF3-211ENST00000484141 TMF1P82094 1093 aa23.42■■□□□ 1.34
PCGF3-211ENST00000484141 ANO8Q9HCE9 1232 aaPredicted RBP23.42■■□□□ 1.34
PCGF3-211ENST00000484141 CLSPNQ9HAW4 1339 aa23.41■■□□□ 1.34
PCGF3-211ENST00000484141 PEAK1Q9H792 1746 aa23.41■■□□□ 1.34
PCGF3-211ENST00000484141 DDB1Q16531 1140 aa23.39■■□□□ 1.33
PCGF3-211ENST00000484141 PTF1AQ7RTS3 328 aa23.39■■□□□ 1.33
PCGF3-211ENST00000484141 CCER1Q8TC90 406 aaPredicted RBP23.39■■□□□ 1.33
PCGF3-211ENST00000484141 CARD10Q9BWT7 1032 aa23.39■■□□□ 1.33
PCGF3-211ENST00000484141 TIMELESSQ9UNS1 1208 aa23.39■■□□□ 1.33
PCGF3-211ENST00000484141 ANKRD36BQ8N2N9 1353 aa23.39■■□□□ 1.33
PCGF3-211ENST00000484141 BCL11BQ9C0K0 894 aaPredicted RBP23.38■■□□□ 1.33
PCGF3-211ENST00000484141 SBF2Q86WG5 1849 aa23.38■■□□□ 1.33
PCGF3-211ENST00000484141 ZBTB7AO95365 584 aa23.37■■□□□ 1.33
PCGF3-211ENST00000484141 MARCH10Q8NA82 808 aaPredicted RBP23.37■■□□□ 1.33
PCGF3-211ENST00000484141 PDGFDQ9GZP0 370 aaPredicted RBP23.37■■□□□ 1.33
PCGF3-211ENST00000484141 MYOM1P52179 1685 aa23.37■■□□□ 1.33
PCGF3-211ENST00000484141 ABCC6O95255 1503 aa23.36■■□□□ 1.33
PCGF3-211ENST00000484141 RGPD3A6NKT7 1758 aaPredicted RBP23.36■■□□□ 1.33
PCGF3-211ENST00000484141 RGPD4Q7Z3J3 1758 aa23.36■■□□□ 1.33
PCGF3-211ENST00000484141 ERBB3P21860 1342 aa23.35■■□□□ 1.33
PCGF3-211ENST00000484141 ANKRD24Q8TF21 1146 aa23.35■■□□□ 1.33
PCGF3-211ENST00000484141 SLC24A1O60721 1099 aa23.34■■□□□ 1.33
PCGF3-211ENST00000484141 GGNBP2Q9H3C7 697 aa23.34■■□□□ 1.33
PCGF3-211ENST00000484141 NLRP2Q9NX02 1062 aa23.34■■□□□ 1.33
PCGF3-211ENST00000484141 CASZ1Q86V15 1759 aa23.34■■□□□ 1.33
PCGF3-211ENST00000484141 FYB1O15117 783 aa23.33■■□□□ 1.33
PCGF3-211ENST00000484141 LTV1Q96GA3 475 aaPredicted RBP23.33■■□□□ 1.33
PCGF3-211ENST00000484141 COG3Q96JB2 828 aa23.33■■□□□ 1.33
PCGF3-211ENST00000484141 PROM2Q8N271 834 aa23.32■■□□□ 1.32
PCGF3-211ENST00000484141 ZNF784Q8NCA9 323 aaPredicted RBP23.32■■□□□ 1.32
PCGF3-211ENST00000484141 CARD14Q9BXL6 1004 aa23.32■■□□□ 1.32
PCGF3-211ENST00000484141 ATF5Q9Y2D1 282 aaPredicted RBP23.32■■□□□ 1.32
PCGF3-211ENST00000484141 MAP3K19Q56UN5 1328 aa23.32■■□□□ 1.32
PCGF3-211ENST00000484141 PTGER2P43116 358 aa23.31■■□□□ 1.32
PCGF3-211ENST00000484141 RGPD2P0DJD1 1756 aa23.31■■□□□ 1.32
PCGF3-211ENST00000484141 CCDC7Q96M83 1385 aa23.3■■□□□ 1.32
PCGF3-211ENST00000484141 IP6K1Q92551 441 aa23.3■■□□□ 1.32
PCGF3-211ENST00000484141 RRS1Q15050 365 aaKnown RBP23.29■■□□□ 1.32
PCGF3-211ENST00000484141 STK32BQ9NY57 414 aa23.29■■□□□ 1.32
PCGF3-211ENST00000484141 KIF20BQ96Q89 1820 aa23.29■■□□□ 1.32
PCGF3-211ENST00000484141 CDCA7Q9BWT1 371 aaPredicted RBP23.28■■□□□ 1.32
PCGF3-211ENST00000484141 BCL9O00512 1426 aa23.27■■□□□ 1.32
PCGF3-211ENST00000484141 EXOC5O00471 708 aa23.27■■□□□ 1.32
PCGF3-211ENST00000484141 HOXC9P31274 260 aa23.27■■□□□ 1.32
PCGF3-211ENST00000484141 TXNRD1Q16881 649 aa23.27■■□□□ 1.32
PCGF3-211ENST00000484141 POLR3GLQ9BT43 218 aa23.27■■□□□ 1.32
PCGF3-211ENST00000484141 HSPA5P11021 654 aaKnown RBP23.26■■□□□ 1.31
PCGF3-211ENST00000484141 CDCA8Q53HL2 280 aa23.26■■□□□ 1.31
PCGF3-211ENST00000484141 FHDC1Q9C0D6 1143 aaPredicted RBP23.26■■□□□ 1.31
PCGF3-211ENST00000484141 SLC15A2Q16348 729 aa23.25■■□□□ 1.31
PCGF3-211ENST00000484141 SYT17Q9BSW7 474 aa23.25■■□□□ 1.31
PCGF3-211ENST00000484141 TNS2Q63HR2 1409 aa23.25■■□□□ 1.31
PCGF3-211ENST00000484141 NSD3Q9BZ95 1437 aa23.25■■□□□ 1.31
PCGF3-211ENST00000484141 UTRNP46939 3433 aa23.24■■□□□ 1.31
PCGF3-211ENST00000484141 IL2RBP14784 551 aa23.24■■□□□ 1.31
PCGF3-211ENST00000484141 AMPHP49418 695 aa23.24■■□□□ 1.31
PCGF3-211ENST00000484141 MTFR1LQ9H019 292 aa23.23■■□□□ 1.31
PCGF3-211ENST00000484141 ACSBG1Q96GR2 724 aa23.22■■□□□ 1.31
PCGF3-211ENST00000484141 FAM208AQ9UK61 1670 aaKnown RBP23.22■■□□□ 1.31
PCGF3-211ENST00000484141 SENP3-EIF4A1A0A087X0R7 540 aa23.21■■□□□ 1.31
PCGF3-211ENST00000484141 EIF4G2P78344 907 aaKnown RBP eCLIP23.19■■□□□ 1.33e-6■■■■■ 28.1
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms