RNA–Protein interactions for RNA: ENST00000483955.1

SHROOM4-204, Transcript of shroom family member 4, humanhuman

TSL 2

Gene SHROOM4, Length 882 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-204ENST00000483955 JCADQ9P266 1359 aa12.15□□□□□ -0.46
SHROOM4-204ENST00000483955 GCP02774 474 aa12.14□□□□□ -0.47
SHROOM4-204ENST00000483955 HAP1P54257 671 aaPredicted RBP12.14□□□□□ -0.47
SHROOM4-204ENST00000483955 CFAP53Q96M91 514 aa12.14□□□□□ -0.47
SHROOM4-204ENST00000483955 MTHFSP49914 203 aa12.13□□□□□ -0.47
SHROOM4-204ENST00000483955 CPDO75976 1380 aa12.13□□□□□ -0.47
SHROOM4-204ENST00000483955 FLT4P35916 1363 aa12.13□□□□□ -0.47
SHROOM4-204ENST00000483955 LTN1O94822 1766 aa12.13□□□□□ -0.47
SHROOM4-204ENST00000483955 MAP2P11137 1827 aaKnown RBP12.12□□□□□ -0.47
SHROOM4-204ENST00000483955 SOX12O15370 315 aa12.12□□□□□ -0.47
SHROOM4-204ENST00000483955 RRS1Q15050 365 aaKnown RBP12.12□□□□□ -0.47
SHROOM4-204ENST00000483955 MRS2Q9HD23 443 aa12.12□□□□□ -0.47
SHROOM4-204ENST00000483955 POLKQ9UBT6 870 aa12.12□□□□□ -0.47
SHROOM4-204ENST00000483955 MAP3K19Q56UN5 1328 aa12.11□□□□□ -0.47
SHROOM4-204ENST00000483955 INSRP06213 1382 aa12.11□□□□□ -0.47
SHROOM4-204ENST00000483955 EMILIN1Q9Y6C2 1016 aa12.11□□□□□ -0.47
SHROOM4-204ENST00000483955 BLMP54132 1417 aaPredicted RBP12.11□□□□□ -0.47
SHROOM4-204ENST00000483955 AMPHP49418 695 aa12.1□□□□□ -0.47
SHROOM4-204ENST00000483955 ARHGEF25Q86VW2 580 aa12.1□□□□□ -0.47
SHROOM4-204ENST00000483955 SPATA31A6Q5VVP1 1343 aa12.1□□□□□ -0.47
SHROOM4-204ENST00000483955 COL3A1P02461 1466 aaPredicted RBP12.09□□□□□ -0.47
SHROOM4-204ENST00000483955 PEAK1Q9H792 1746 aa12.09□□□□□ -0.47
SHROOM4-204ENST00000483955 PPM1GO15355 546 aaPredicted RBP12.09□□□□□ -0.47
SHROOM4-204ENST00000483955 PLEKHG5O94827 1062 aa12.09□□□□□ -0.47
SHROOM4-204ENST00000483955 HSPA1LP34931 641 aa12.09□□□□□ -0.47
SHROOM4-204ENST00000483955 CABLES1Q8TDN4 633 aa12.09□□□□□ -0.47
SHROOM4-204ENST00000483955 FBXO41Q8TF61 875 aa12.09□□□□□ -0.47
SHROOM4-204ENST00000483955 KIAA0232Q92628 1395 aa12.08□□□□□ -0.48
SHROOM4-204ENST00000483955 FBLN1P23142 703 aa12.08□□□□□ -0.48
SHROOM4-204ENST00000483955 HOXC9P31274 260 aa12.08□□□□□ -0.48
SHROOM4-204ENST00000483955 IP6K1Q92551 441 aa12.08□□□□□ -0.48
SHROOM4-204ENST00000483955 ARXQ96QS3 562 aa12.08□□□□□ -0.48
SHROOM4-204ENST00000483955 PRDM11Q9NQV5 511 aa12.08□□□□□ -0.48
SHROOM4-204ENST00000483955 TAOK2Q9UL54 1235 aa12.08□□□□□ -0.48
SHROOM4-204ENST00000483955 DIAPH1O60610 1272 aaKnown RBP12.07□□□□□ -0.48
SHROOM4-204ENST00000483955 ZC3H6P61129 1189 aaKnown RBP12.07□□□□□ -0.48
SHROOM4-204ENST00000483955 NUDCQ9Y266 331 aa12.07□□□□□ -0.48
SHROOM4-204ENST00000483955 COL14A1Q05707 1796 aaKnown RBP12.07□□□□□ -0.48
SHROOM4-204ENST00000483955 ZBTB7CA1YPR0 619 aa12.06□□□□□ -0.48
SHROOM4-204ENST00000483955 WDR43Q15061 677 aaKnown RBP eCLIP12.06□□□□□ -0.48
SHROOM4-204ENST00000483955 LMO7Q8WWI1 1683 aa12.06□□□□□ -0.48
SHROOM4-204ENST00000483955 COL18A1P39060 1754 aa12.05□□□□□ -0.48
SHROOM4-204ENST00000483955 CCDC184Q52MB2 194 aa12.05□□□□□ -0.48
SHROOM4-204ENST00000483955 FAM208AQ9UK61 1670 aaKnown RBP12.05□□□□□ -0.48
SHROOM4-204ENST00000483955 HSP90AB2PQ58FF8 381 aa12.04□□□□□ -0.48
SHROOM4-204ENST00000483955 IL13P35225 146 aa12.03□□□□□ -0.48
SHROOM4-204ENST00000483955 POLA2Q14181 598 aa12.03□□□□□ -0.48
SHROOM4-204ENST00000483955 EIF4A2Q14240 407 aaKnown RBP12.03□□□□□ -0.48
SHROOM4-204ENST00000483955 PNISRQ8TF01 805 aaKnown RBP12.03□□□□□ -0.48
SHROOM4-204ENST00000483955 ERBB3P21860 1342 aa12.03□□□□□ -0.48
SHROOM4-204ENST00000483955 RGPD1P0DJD0 1748 aa12.03□□□□□ -0.48
SHROOM4-204ENST00000483955 COL5A2P05997 1499 aaPredicted RBP12.02□□□□□ -0.48
SHROOM4-204ENST00000483955 NUTM2BA6NNL0 878 aaPredicted RBP12.02□□□□□ -0.49
SHROOM4-204ENST00000483955 NUTM2EB1AL46 878 aaPredicted RBP12.02□□□□□ -0.49
SHROOM4-204ENST00000483955 PLCB2Q00722 1185 aa12.02□□□□□ -0.49
SHROOM4-204ENST00000483955 CHRNA2Q15822 529 aa12.02□□□□□ -0.49
SHROOM4-204ENST00000483955 NUTM2AQ8IVF1 878 aaPredicted RBP12.02□□□□□ -0.49
SHROOM4-204ENST00000483955 PLCH1Q4KWH8 1693 aa12.02□□□□□ -0.49
SHROOM4-204ENST00000483955 NWD2Q9ULI1 1742 aa12.02□□□□□ -0.49
SHROOM4-204ENST00000483955 LRP6O75581 1613 aa12.01□□□□□ -0.49
SHROOM4-204ENST00000483955 CAMTA1Q9Y6Y1 1673 aa12.01□□□□□ -0.49
SHROOM4-204ENST00000483955 U2SURPO15042 1029 aaKnown RBP12.01□□□□□ -0.49
SHROOM4-204ENST00000483955 ADAMTS2O95450 1211 aa12.01□□□□□ -0.49
SHROOM4-204ENST00000483955 FAM9BQ8IZU0 186 aa12.01□□□□□ -0.49
SHROOM4-204ENST00000483955 ANKRD24Q8TF21 1146 aa12.01□□□□□ -0.49
SHROOM4-204ENST00000483955 PNNQ9H307 717 aaKnown RBP12.01□□□□□ -0.49
SHROOM4-204ENST00000483955 U2AF1L5P0DN76 240 aaPredicted RBP12□□□□□ -0.49
SHROOM4-204ENST00000483955 U2AF1Q01081 240 aaKnown RBP eCLIP12□□□□□ -0.49
SHROOM4-204ENST00000483955 IGSF1Q8N6C5 1336 aa12□□□□□ -0.49
SHROOM4-204ENST00000483955 RGPD5Q99666 1765 aa12□□□□□ -0.49
SHROOM4-204ENST00000483955 FAM83GA6ND36 823 aa11.99□□□□□ -0.49
SHROOM4-204ENST00000483955 CSB-PGBD3P0DP91 1061 aa11.99□□□□□ -0.49
SHROOM4-204ENST00000483955 MEX3CQ5U5Q3 659 aaKnown RBP11.99□□□□□ -0.49
SHROOM4-204ENST00000483955 LTV1Q96GA3 475 aaPredicted RBP11.99□□□□□ -0.49
SHROOM4-204ENST00000483955 AXIN2Q9Y2T1 843 aa11.99□□□□□ -0.49
SHROOM4-204ENST00000483955 WDR17Q8IZU2 1322 aa11.99□□□□□ -0.49
SHROOM4-204ENST00000483955 NCAPD2Q15021 1401 aa11.99□□□□□ -0.49
SHROOM4-204ENST00000483955 SLIT2O94813 1529 aa11.99□□□□□ -0.49
SHROOM4-204ENST00000483955 NRAPQ86VF7 1730 aa11.99□□□□□ -0.49
SHROOM4-204ENST00000483955 KDRP35968 1356 aa11.98□□□□□ -0.49
SHROOM4-204ENST00000483955 PLEKHG2Q9H7P9 1386 aa11.98□□□□□ -0.49
SHROOM4-204ENST00000483955 NEFMP07197 916 aa11.98□□□□□ -0.49
SHROOM4-204ENST00000483955 EVA1CP58658 441 aa11.98□□□□□ -0.49
SHROOM4-204ENST00000483955 BTG4Q9NY30 223 aa11.98□□□□□ -0.49
SHROOM4-204ENST00000483955 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.97□□□□□ -0.49
SHROOM4-204ENST00000483955 FCHSD2O94868 740 aa11.97□□□□□ -0.49
SHROOM4-204ENST00000483955 C8orf37Q96NL8 207 aa11.97□□□□□ -0.49
SHROOM4-204ENST00000483955 EYA1Q99502 592 aa11.97□□□□□ -0.49
SHROOM4-204ENST00000483955 ADAMTS8Q9UP79 889 aa11.97□□□□□ -0.49
SHROOM4-204ENST00000483955 CRB1P82279 1406 aa11.96□□□□□ -0.49
SHROOM4-204ENST00000483955 MAPK8IP3Q9UPT6 1336 aa11.96□□□□□ -0.49
SHROOM4-204ENST00000483955 SULT6B1Q6IMI4 303 aa11.96□□□□□ -0.49
SHROOM4-204ENST00000483955 TOM1L2Q6ZVM7 507 aa11.96□□□□□ -0.49
SHROOM4-204ENST00000483955 STRN4Q9NRL3 753 aa11.96□□□□□ -0.49
SHROOM4-204ENST00000483955 FNBP4Q8N3X1 1017 aaPredicted RBP11.95□□□□□ -0.5
SHROOM4-204ENST00000483955 RUNDC1Q96C34 613 aa11.95□□□□□ -0.5
SHROOM4-204ENST00000483955 NGLY1Q96IV0 654 aa11.95□□□□□ -0.5
SHROOM4-204ENST00000483955 RSPH6AQ9H0K4 717 aa11.95□□□□□ -0.5
SHROOM4-204ENST00000483955 NLRP2Q9NX02 1062 aa11.95□□□□□ -0.5
SHROOM4-204ENST00000483955 HMOX1P09601 288 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms