RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 U2AF1Q01081 240 aaKnown RBP eCLIP22.74■■□□□ 1.23
MRPL28-210ENST00000483764 ARHGEF25Q86VW2 580 aa22.74■■□□□ 1.23
MRPL28-210ENST00000483764 HOXC9P31274 260 aa22.73■■□□□ 1.23
MRPL28-210ENST00000483764 PEAK1Q9H792 1746 aa22.73■■□□□ 1.23
MRPL28-210ENST00000483764 RTL1A6NKG5 1358 aa22.72■■□□□ 1.23
MRPL28-210ENST00000483764 BLMP54132 1417 aaPredicted RBP22.72■■□□□ 1.23
MRPL28-210ENST00000483764 EIF4A2Q14240 407 aaKnown RBP22.72■■□□□ 1.23
MRPL28-210ENST00000483764 IP6K1Q92551 441 aa22.72■■□□□ 1.23
MRPL28-210ENST00000483764 ZBTB7CA1YPR0 619 aa22.71■■□□□ 1.23
MRPL28-210ENST00000483764 ZC3H6P61129 1189 aaKnown RBP22.71■■□□□ 1.23
MRPL28-210ENST00000483764 CCDC146Q8IYE0 955 aa22.68■■□□□ 1.22
MRPL28-210ENST00000483764 HAP1P54257 671 aaPredicted RBP22.67■■□□□ 1.22
MRPL28-210ENST00000483764 PHRF1Q9P1Y6 1649 aaKnown RBP22.66■■□□□ 1.22
MRPL28-210ENST00000483764 LTN1O94822 1766 aa22.66■■□□□ 1.22
MRPL28-210ENST00000483764 FCHSD2O94868 740 aa22.66■■□□□ 1.22
MRPL28-210ENST00000483764 RUNDC1Q96C34 613 aa22.66■■□□□ 1.22
MRPL28-210ENST00000483764 SENP3-EIF4A1A0A087X0R7 540 aa22.65■■□□□ 1.22
MRPL28-210ENST00000483764 PNNQ9H307 717 aaKnown RBP22.65■■□□□ 1.22
MRPL28-210ENST00000483764 PHLPP1O60346 1717 aa22.65■■□□□ 1.22
MRPL28-210ENST00000483764 CRYBG1Q9Y4K1 1723 aa22.65■■□□□ 1.22
MRPL28-210ENST00000483764 CPDO75976 1380 aa22.65■■□□□ 1.22
MRPL28-210ENST00000483764 LTV1Q96GA3 475 aaPredicted RBP22.63■■□□□ 1.21
MRPL28-210ENST00000483764 COL16A1Q07092 1604 aaPredicted RBP22.63■■□□□ 1.21
MRPL28-210ENST00000483764 KIAA0232Q92628 1395 aa22.63■■□□□ 1.21
MRPL28-210ENST00000483764 HMOX1P09601 288 aa22.62■■□□□ 1.21
MRPL28-210ENST00000483764 AXIN2Q9Y2T1 843 aa22.62■■□□□ 1.21
MRPL28-210ENST00000483764 APAF1O14727 1248 aa22.62■■□□□ 1.21
MRPL28-210ENST00000483764 PLEKHF1Q96S99 279 aa22.62■■□□□ 1.21
MRPL28-210ENST00000483764 RSPH6AQ9H0K4 717 aa22.62■■□□□ 1.21
MRPL28-210ENST00000483764 EYA1Q99502 592 aa22.61■■□□□ 1.21
MRPL28-210ENST00000483764 CHRNA2Q15822 529 aa22.6■■□□□ 1.21
MRPL28-210ENST00000483764 SULT6B1Q6IMI4 303 aa22.6■■□□□ 1.21
MRPL28-210ENST00000483764 PRDM11Q9NQV5 511 aa22.6■■□□□ 1.21
MRPL28-210ENST00000483764 PRKAR2BP31323 418 aa22.59■■□□□ 1.21
MRPL28-210ENST00000483764 SALL2Q9Y467 1007 aaPredicted RBP22.59■■□□□ 1.21
MRPL28-210ENST00000483764 IGSF1Q8N6C5 1336 aa22.58■■□□□ 1.21
MRPL28-210ENST00000483764 TCP11L2Q8N4U5 519 aa22.58■■□□□ 1.21
MRPL28-210ENST00000483764 ANKRD24Q8TF21 1146 aa22.58■■□□□ 1.21
MRPL28-210ENST00000483764 MAPK8IP3Q9UPT6 1336 aa22.57■■□□□ 1.2
MRPL28-210ENST00000483764 AEBP1Q8IUX7 1158 aa22.57■■□□□ 1.2
MRPL28-210ENST00000483764 COL22A1Q8NFW1 1626 aaPredicted RBP22.57■■□□□ 1.2
MRPL28-210ENST00000483764 NEFMP07197 916 aa22.57■■□□□ 1.2
MRPL28-210ENST00000483764 NGEFQ8N5V2 710 aa22.57■■□□□ 1.2
MRPL28-210ENST00000483764 ABCC6O95255 1503 aa22.56■■□□□ 1.2
MRPL28-210ENST00000483764 ABCA3Q99758 1704 aa22.56■■□□□ 1.2
MRPL28-210ENST00000483764 RGPD1P0DJD0 1748 aa22.56■■□□□ 1.2
MRPL28-210ENST00000483764 ERBB3P21860 1342 aa22.54■■□□□ 1.2
MRPL28-210ENST00000483764 NBPF6Q5VWK0 638 aa22.54■■□□□ 1.2
MRPL28-210ENST00000483764 NBPF4Q96M43 638 aa22.54■■□□□ 1.2
MRPL28-210ENST00000483764 COL18A1P39060 1754 aa22.54■■□□□ 1.2
MRPL28-210ENST00000483764 KDRP35968 1356 aa22.54■■□□□ 1.2
MRPL28-210ENST00000483764 FAM83GA6ND36 823 aa22.53■■□□□ 1.2
MRPL28-210ENST00000483764 PHACTR3Q96KR7 559 aa22.53■■□□□ 1.2
MRPL28-210ENST00000483764 RRP7AQ9Y3A4 280 aaKnown RBP22.52■■□□□ 1.2
MRPL28-210ENST00000483764 PDE3BQ13370 1112 aa22.52■■□□□ 1.19
MRPL28-210ENST00000483764 NEUROD2Q15784 382 aa22.52■■□□□ 1.19
MRPL28-210ENST00000483764 NCBP3Q53F19 620 aaKnown RBP22.52■■□□□ 1.19
MRPL28-210ENST00000483764 JCADQ9P266 1359 aa22.51■■□□□ 1.19
MRPL28-210ENST00000483764 TMPOP42166 694 aaKnown RBP22.51■■□□□ 1.19
MRPL28-210ENST00000483764 CSB-PGBD3P0DP91 1061 aa22.5■■□□□ 1.19
MRPL28-210ENST00000483764 USHBP1Q8N6Y0 703 aa22.5■■□□□ 1.19
MRPL28-210ENST00000483764 HSPA1LP34931 641 aa22.49■■□□□ 1.19
MRPL28-210ENST00000483764 PPP4R2Q9NY27 417 aa22.49■■□□□ 1.19
MRPL28-210ENST00000483764 CAMTA1Q9Y6Y1 1673 aa22.48■■□□□ 1.19
MRPL28-210ENST00000483764 NUTM2BA6NNL0 878 aaPredicted RBP22.47■■□□□ 1.19
MRPL28-210ENST00000483764 NUTM2EB1AL46 878 aaPredicted RBP22.47■■□□□ 1.19
MRPL28-210ENST00000483764 NFE2L2Q16236 605 aa22.47■■□□□ 1.19
MRPL28-210ENST00000483764 CCDC27Q2M243 656 aa22.47■■□□□ 1.19
MRPL28-210ENST00000483764 NUTM2AQ8IVF1 878 aaPredicted RBP22.47■■□□□ 1.19
MRPL28-210ENST00000483764 NLRP2Q9NX02 1062 aa22.47■■□□□ 1.19
MRPL28-210ENST00000483764 RGPD5Q99666 1765 aa22.47■■□□□ 1.19
MRPL28-210ENST00000483764 ZNF521Q96K83 1311 aa22.47■■□□□ 1.19
MRPL28-210ENST00000483764 LMO7Q8WWI1 1683 aa22.47■■□□□ 1.19
MRPL28-210ENST00000483764 ADAMTS2O95450 1211 aa22.47■■□□□ 1.19
MRPL28-210ENST00000483764 RIPK4P57078 832 aa22.47■■□□□ 1.19
MRPL28-210ENST00000483764 WWC1Q8IX03 1113 aa22.46■■□□□ 1.19
MRPL28-210ENST00000483764 PHF23Q9BUL5 403 aaPredicted RBP22.46■■□□□ 1.19
MRPL28-210ENST00000483764 RNF123Q5XPI4 1314 aa22.45■■□□□ 1.19
MRPL28-210ENST00000483764 NCAPD2Q15021 1401 aa22.45■■□□□ 1.18
MRPL28-210ENST00000483764 EVA1CP58658 441 aa22.45■■□□□ 1.18
MRPL28-210ENST00000483764 WDR17Q8IZU2 1322 aa22.45■■□□□ 1.18
MRPL28-210ENST00000483764 BTG4Q9NY30 223 aa22.44■■□□□ 1.18
MRPL28-210ENST00000483764 COL5A2P05997 1499 aaPredicted RBP22.44■■□□□ 1.18
MRPL28-210ENST00000483764 GOLGA2Q08379 1002 aa22.42■■□□□ 1.18
MRPL28-210ENST00000483764 STRN4Q9NRL3 753 aa22.42■■□□□ 1.18
MRPL28-210ENST00000483764 TRIM35Q9UPQ4 493 aa22.42■■□□□ 1.18
MRPL28-210ENST00000483764 SPATA31A6Q5VVP1 1343 aa22.42■■□□□ 1.18
MRPL28-210ENST00000483764 TOM1L2Q6ZVM7 507 aa22.41■■□□□ 1.18
MRPL28-210ENST00000483764 TSHZ2Q9NRE2 1034 aa22.41■■□□□ 1.18
MRPL28-210ENST00000483764 COL14A1Q05707 1796 aaKnown RBP22.41■■□□□ 1.18
MRPL28-210ENST00000483764 RGPD2P0DJD1 1756 aa22.41■■□□□ 1.18
MRPL28-210ENST00000483764 MTHFSDQ2M296 383 aaKnown RBP22.41■■□□□ 1.18
MRPL28-210ENST00000483764 WDR63Q8IWG1 891 aa22.41■■□□□ 1.18
MRPL28-210ENST00000483764 CDCA7LQ96GN5 454 aa22.41■■□□□ 1.18
MRPL28-210ENST00000483764 GAS2L2Q8NHY3 880 aa22.4■■□□□ 1.18
MRPL28-210ENST00000483764 LARP1Q6PKG0 1096 aaKnown RBP22.39■■□□□ 1.17
MRPL28-210ENST00000483764 FAM208AQ9UK61 1670 aaKnown RBP22.39■■□□□ 1.17
MRPL28-210ENST00000483764 LMOD3Q0VAK6 560 aa22.38■■□□□ 1.17
MRPL28-210ENST00000483764 CARD10Q9BWT7 1032 aa22.38■■□□□ 1.17
MRPL28-210ENST00000483764 RAPGEF4Q8WZA2 1011 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms