RNA–Protein interactions for RNA: ENST00000483564.5

GABRE-208, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 3

Gene GABRE, Length 2,747 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-208ENST00000483564 MYRIPQ8NFW9 859 aa11.33□□□□□ -0.6
GABRE-208ENST00000483564 BMP2KLQ5H9B9 411 aa11.32□□□□□ -0.6
GABRE-208ENST00000483564 C1orf115Q9H7X2 142 aa11.32□□□□□ -0.6
GABRE-208ENST00000483564 POLR3AO14802 1390 aaPredicted RBP11.32□□□□□ -0.6
GABRE-208ENST00000483564 KIF16BQ96L93 1317 aa11.32□□□□□ -0.6
GABRE-208ENST00000483564 U2AF2P26368 475 aaKnown RBP eCLIP11.32□□□□□ -0.61e-6■■■■□ 22.4
GABRE-208ENST00000483564 MTHFSP49914 203 aa11.32□□□□□ -0.6
GABRE-208ENST00000483564 CCDC39Q9UFE4 941 aa11.32□□□□□ -0.6
GABRE-208ENST00000483564 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.32□□□□□ -0.6
GABRE-208ENST00000483564 EIF2AK4Q9P2K8 1649 aaKnown RBP11.31□□□□□ -0.6
GABRE-208ENST00000483564 PTMAP06454 111 aaKnown RBP11.31□□□□□ -0.6
GABRE-208ENST00000483564 ZDHHC9Q9Y397 364 aa11.31□□□□□ -0.6
GABRE-208ENST00000483564 POGZQ7Z3K3 1410 aa11.31□□□□□ -0.6
GABRE-208ENST00000483564 DIP2BQ9P265 1576 aa11.31□□□□□ -0.6
GABRE-208ENST00000483564 CYP2E1P05181 493 aaPredicted RBP11.31□□□□□ -0.6
GABRE-208ENST00000483564 CHRM1P11229 460 aaPredicted RBP11.31□□□□□ -0.6
GABRE-208ENST00000483564 MLH3Q9UHC1 1453 aa11.3□□□□□ -0.6
GABRE-208ENST00000483564 MCM5P33992 734 aa11.3□□□□□ -0.6
GABRE-208ENST00000483564 LRSAM1Q6UWE0 723 aa11.3□□□□□ -0.6
GABRE-208ENST00000483564 CHMP4CQ96CF2 233 aa11.3□□□□□ -0.6
GABRE-208ENST00000483564 LAMC1P11047 1609 aa11.3□□□□□ -0.6
GABRE-208ENST00000483564 U2AF1L5P0DN76 240 aaPredicted RBP11.3□□□□□ -0.6
GABRE-208ENST00000483564 U2AF1Q01081 240 aaKnown RBP eCLIP11.3□□□□□ -0.6
GABRE-208ENST00000483564 KIDINS220Q9ULH0 1771 aa11.3□□□□□ -0.6
GABRE-208ENST00000483564 AK9Q5TCS8 1911 aa11.3□□□□□ -0.6
GABRE-208ENST00000483564 SYNMO15061 1565 aa11.29□□□□□ -0.6
GABRE-208ENST00000483564 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.29□□□□□ -0.6
GABRE-208ENST00000483564 NUCB2P80303 420 aa11.29□□□□□ -0.6
GABRE-208ENST00000483564 KIAA2012Q0VF49 1180 aa11.29□□□□□ -0.6
GABRE-208ENST00000483564 PDCL2Q8N4E4 241 aa11.29□□□□□ -0.6
GABRE-208ENST00000483564 DEPDC5O75140 1603 aa11.29□□□□□ -0.6
GABRE-208ENST00000483564 CFAP70Q5T0N1 1121 aa11.29□□□□□ -0.6
GABRE-208ENST00000483564 SLC12A5Q9H2X9 1139 aa11.29□□□□□ -0.6
GABRE-208ENST00000483564 HECW2Q9P2P5 1572 aa11.28□□□□□ -0.6
GABRE-208ENST00000483564 CCDC27Q2M243 656 aa11.28□□□□□ -0.6
GABRE-208ENST00000483564 DNAJC2Q99543 621 aaKnown RBP11.28□□□□□ -0.6
GABRE-208ENST00000483564 SCAF11Q99590 1463 aaKnown RBP11.28□□□□□ -0.6
GABRE-208ENST00000483564 TTC12Q9H892 705 aaPredicted RBP11.28□□□□□ -0.6
GABRE-208ENST00000483564 TRIM6-TRIM34B2RNG4 842 aa11.27□□□□□ -0.61
GABRE-208ENST00000483564 FAM69CQ0P6D2 419 aa11.27□□□□□ -0.61
GABRE-208ENST00000483564 TRIM34Q9BYJ4 488 aa11.27□□□□□ -0.61
GABRE-208ENST00000483564 BCL2L12Q9HB09 334 aa11.27□□□□□ -0.61
GABRE-208ENST00000483564 FOXD4L6Q3SYB3 417 aaPredicted RBP11.27□□□□□ -0.61
GABRE-208ENST00000483564 FOXD4L3Q6VB84 417 aaPredicted RBP11.27□□□□□ -0.61
GABRE-208ENST00000483564 KIF3AQ9Y496 699 aa11.27□□□□□ -0.61
GABRE-208ENST00000483564 GSPT1P15170 499 aaKnown RBP11.26□□□□□ -0.61
GABRE-208ENST00000483564 NOLC1Q14978 699 aaKnown RBP eCLIP11.26□□□□□ -0.612e-7■■■□□ 15.8
GABRE-208ENST00000483564 TRERF1Q96PN7 1200 aa11.26□□□□□ -0.61
GABRE-208ENST00000483564 IQSEC2Q5JU85 1478 aa11.26□□□□□ -0.61
GABRE-208ENST00000483564 KANK1Q14678 1352 aa11.26□□□□□ -0.61
GABRE-208ENST00000483564 TPRNQ4KMQ1 711 aa11.26□□□□□ -0.61
GABRE-208ENST00000483564 RICTORQ6R327 1708 aa11.25□□□□□ -0.61
GABRE-208ENST00000483564 SIRT2Q8IXJ6 389 aa11.25□□□□□ -0.61
GABRE-208ENST00000483564 ARHGAP31Q2M1Z3 1444 aa11.25□□□□□ -0.61
GABRE-208ENST00000483564 ATP10AO60312 1499 aa11.24□□□□□ -0.61
GABRE-208ENST00000483564 RABEP1Q15276 862 aa11.24□□□□□ -0.61
GABRE-208ENST00000483564 C16orf71Q8IYS4 520 aaPredicted RBP11.24□□□□□ -0.61
GABRE-208ENST00000483564 TRIM35Q9UPQ4 493 aa11.24□□□□□ -0.61
GABRE-208ENST00000483564 CDC45O75419 566 aa11.24□□□□□ -0.61
GABRE-208ENST00000483564 MYOM1P52179 1685 aa11.24□□□□□ -0.61
GABRE-208ENST00000483564 NSD3Q9BZ95 1437 aa11.24□□□□□ -0.61
GABRE-208ENST00000483564 VWDEQ8N2E2 1590 aa11.23□□□□□ -0.61
GABRE-208ENST00000483564 PIBF1Q8WXW3 757 aa11.23□□□□□ -0.61
GABRE-208ENST00000483564 PRIMPOLQ96LW4 560 aa11.23□□□□□ -0.61
GABRE-208ENST00000483564 USP26Q9BXU7 913 aa11.23□□□□□ -0.61
GABRE-208ENST00000483564 GDPD2Q9HCC8 539 aa11.23□□□□□ -0.61
GABRE-208ENST00000483564 PPIP5K1Q6PFW1 1433 aa11.23□□□□□ -0.61
GABRE-208ENST00000483564 ERVK-7P63135 1459 aa11.23□□□□□ -0.61
GABRE-208ENST00000483564 TET3O43151 1660 aa11.23□□□□□ -0.61
GABRE-208ENST00000483564 U2SURPO15042 1029 aaKnown RBP11.23□□□□□ -0.61
GABRE-208ENST00000483564 ZBTB7BO15156 539 aaPredicted RBP11.23□□□□□ -0.61
GABRE-208ENST00000483564 CAPN2P17655 700 aa11.23□□□□□ -0.61
GABRE-208ENST00000483564 HMGN5P82970 282 aaKnown RBP11.23□□□□□ -0.61
GABRE-208ENST00000483564 USP25Q9UHP3 1055 aa11.23□□□□□ -0.61
GABRE-208ENST00000483564 PPRC1Q5VV67 1664 aaKnown RBP11.23□□□□□ -0.61
GABRE-208ENST00000483564 ERICH4A6NGS2 130 aa11.22□□□□□ -0.61
GABRE-208ENST00000483564 GTF2F1P35269 517 aaKnown RBP eCLIP11.22□□□□□ -0.61
GABRE-208ENST00000483564 TIGD1Q96MW7 591 aa11.22□□□□□ -0.61
GABRE-208ENST00000483564 RNF216Q9NWF9 866 aaPredicted RBP11.22□□□□□ -0.61
GABRE-208ENST00000483564 RNF17Q9BXT8 1623 aaKnown RBP11.22□□□□□ -0.61
GABRE-208ENST00000483564 KIF3BO15066 747 aa11.22□□□□□ -0.61
GABRE-208ENST00000483564 VGFO15240 615 aaPredicted RBP11.22□□□□□ -0.61
GABRE-208ENST00000483564 TSPY26PQ9H489 355 aa11.22□□□□□ -0.61
GABRE-208ENST00000483564 TMPOP42166 694 aaKnown RBP11.22□□□□□ -0.61
GABRE-208ENST00000483564 KIF13AQ9H1H9 1805 aa11.22□□□□□ -0.61
GABRE-208ENST00000483564 ABCA6Q8N139 1617 aa11.21□□□□□ -0.61
GABRE-208ENST00000483564 GADD45BO75293 160 aaPredicted RBP11.21□□□□□ -0.61
GABRE-208ENST00000483564 SLC20A2Q08357 652 aa11.21□□□□□ -0.61
GABRE-208ENST00000483564 OTUD7AQ8TE49 926 aaPredicted RBP11.21□□□□□ -0.61
GABRE-208ENST00000483564 CFAP53Q96M91 514 aa11.21□□□□□ -0.61
GABRE-208ENST00000483564 SLC52A1Q9NWF4 448 aa11.21□□□□□ -0.61
GABRE-208ENST00000483564 TSPOAP1O95153 1857 aa11.21□□□□□ -0.62
GABRE-208ENST00000483564 CCDC66A2RUB6 948 aa11.21□□□□□ -0.62
GABRE-208ENST00000483564 IPO8O15397 1037 aaKnown RBP11.21□□□□□ -0.62
GABRE-208ENST00000483564 CT47B1P0C2W7 299 aaPredicted RBP11.21□□□□□ -0.62
GABRE-208ENST00000483564 GCC1Q96CN9 775 aa11.21□□□□□ -0.62
GABRE-208ENST00000483564 CWC22Q9HCG8 908 aaKnown RBP11.21□□□□□ -0.62
GABRE-208ENST00000483564 NOS1P29475 1434 aa11.2□□□□□ -0.62
GABRE-208ENST00000483564 ATAD2Q6PL18 1390 aa11.2□□□□□ -0.62
GABRE-208ENST00000483564 ADGRF5Q8IZF2 1346 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms