RNA–Protein interactions for RNA: ENST00000482935.5

DNMT3A-212, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 519 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-212ENST00000482935 GGNBP2Q9H3C7 697 aa11.42□□□□□ -0.58
DNMT3A-212ENST00000482935 USP54Q70EL1 1684 aa11.42□□□□□ -0.58
DNMT3A-212ENST00000482935 LMO7Q8WWI1 1683 aa11.42□□□□□ -0.58
DNMT3A-212ENST00000482935 CGNL1Q0VF96 1302 aa11.41□□□□□ -0.58
DNMT3A-212ENST00000482935 KIF7Q2M1P5 1343 aa11.41□□□□□ -0.58
DNMT3A-212ENST00000482935 SPATA31A1Q5TZJ5 1347 aa11.41□□□□□ -0.58
DNMT3A-212ENST00000482935 COL5A2P05997 1499 aaPredicted RBP11.41□□□□□ -0.58
DNMT3A-212ENST00000482935 CSB-PGBD3P0DP91 1061 aa11.41□□□□□ -0.58
DNMT3A-212ENST00000482935 PANK3Q9H999 370 aa11.41□□□□□ -0.58
DNMT3A-212ENST00000482935 ONECUT3O60422 494 aaPredicted RBP11.4□□□□□ -0.58
DNMT3A-212ENST00000482935 TOM1L2Q6ZVM7 507 aa11.4□□□□□ -0.58
DNMT3A-212ENST00000482935 TCP11L2Q8N4U5 519 aa11.4□□□□□ -0.58
DNMT3A-212ENST00000482935 AXIN2Q9Y2T1 843 aa11.4□□□□□ -0.58
DNMT3A-212ENST00000482935 ABCC6O95255 1503 aa11.39□□□□□ -0.59
DNMT3A-212ENST00000482935 WDR17Q8IZU2 1322 aa11.38□□□□□ -0.59
DNMT3A-212ENST00000482935 CRB1P82279 1406 aa11.38□□□□□ -0.59
DNMT3A-212ENST00000482935 KIF20BQ96Q89 1820 aa11.38□□□□□ -0.59
DNMT3A-212ENST00000482935 AMPHP49418 695 aa11.38□□□□□ -0.59
DNMT3A-212ENST00000482935 KRT27Q7Z3Y8 459 aa11.38□□□□□ -0.59
DNMT3A-212ENST00000482935 COL18A1P39060 1754 aa11.37□□□□□ -0.59
DNMT3A-212ENST00000482935 DIEXFQ68CQ4 756 aaKnown RBP11.37□□□□□ -0.59
DNMT3A-212ENST00000482935 BARGINQ6ZT62 677 aa11.37□□□□□ -0.59
DNMT3A-212ENST00000482935 UPF1Q92900 1129 aaKnown RBP eCLIP11.37□□□□□ -0.59
DNMT3A-212ENST00000482935 THRAP3Q9Y2W1 955 aaKnown RBP11.37□□□□□ -0.59
DNMT3A-212ENST00000482935 KNSTRNQ9Y448 316 aa11.37□□□□□ -0.59
DNMT3A-212ENST00000482935 MAP3K19Q56UN5 1328 aa11.36□□□□□ -0.59
DNMT3A-212ENST00000482935 LTN1O94822 1766 aa11.36□□□□□ -0.59
DNMT3A-212ENST00000482935 FBLN1P23142 703 aa11.36□□□□□ -0.59
DNMT3A-212ENST00000482935 RRS1Q15050 365 aaKnown RBP11.36□□□□□ -0.59
DNMT3A-212ENST00000482935 ANKRD24Q8TF21 1146 aa11.36□□□□□ -0.59
DNMT3A-212ENST00000482935 IP6K1Q92551 441 aa11.36□□□□□ -0.59
DNMT3A-212ENST00000482935 NLRP2Q9NX02 1062 aa11.36□□□□□ -0.59
DNMT3A-212ENST00000482935 CCDC7Q96M83 1385 aa11.36□□□□□ -0.59
DNMT3A-212ENST00000482935 ERBB3P21860 1342 aa11.35□□□□□ -0.59
DNMT3A-212ENST00000482935 BLMP54132 1417 aaPredicted RBP11.35□□□□□ -0.59
DNMT3A-212ENST00000482935 HOXC9P31274 260 aa11.35□□□□□ -0.59
DNMT3A-212ENST00000482935 LTV1Q96GA3 475 aaPredicted RBP11.35□□□□□ -0.59
DNMT3A-212ENST00000482935 RTL1A6NKG5 1358 aa11.35□□□□□ -0.59
DNMT3A-212ENST00000482935 WASHC2AQ641Q2 1341 aa11.35□□□□□ -0.59
DNMT3A-212ENST00000482935 EP400Q96L91 3159 aa11.34□□□□□ -0.59
DNMT3A-212ENST00000482935 THSD7AQ9UPZ6 1657 aa11.34□□□□□ -0.59
DNMT3A-212ENST00000482935 NSD2O96028 1365 aa11.34□□□□□ -0.59
DNMT3A-212ENST00000482935 PDE3BQ13370 1112 aa11.34□□□□□ -0.59
DNMT3A-212ENST00000482935 CARD10Q9BWT7 1032 aa11.34□□□□□ -0.59
DNMT3A-212ENST00000482935 RGPD5Q99666 1765 aa11.33□□□□□ -0.59
DNMT3A-212ENST00000482935 BRWD3Q6RI45 1802 aa11.33□□□□□ -0.6
DNMT3A-212ENST00000482935 PPM1GO15355 546 aaPredicted RBP11.33□□□□□ -0.6
DNMT3A-212ENST00000482935 TNNT2P45379 298 aaPredicted RBP11.33□□□□□ -0.6
DNMT3A-212ENST00000482935 CDCA7Q9BWT1 371 aaPredicted RBP11.33□□□□□ -0.6
DNMT3A-212ENST00000482935 FLT4P35916 1363 aa11.32□□□□□ -0.6
DNMT3A-212ENST00000482935 MORC1Q86VD1 984 aa11.32□□□□□ -0.6
DNMT3A-212ENST00000482935 SMG6Q86US8 1419 aaKnown RBP11.32□□□□□ -0.6
DNMT3A-212ENST00000482935 KIF24Q5T7B8 1368 aa11.31□□□□□ -0.6
DNMT3A-212ENST00000482935 SF3B2Q13435 895 aaKnown RBP11.31□□□□□ -0.6
DNMT3A-212ENST00000482935 DDB1Q16531 1140 aa11.31□□□□□ -0.6
DNMT3A-212ENST00000482935 FAM182BQ5T319 152 aa11.31□□□□□ -0.6
DNMT3A-212ENST00000482935 CCDC125Q86Z20 511 aa11.31□□□□□ -0.6
DNMT3A-212ENST00000482935 EMILIN1Q9Y6C2 1016 aa11.31□□□□□ -0.6
DNMT3A-212ENST00000482935 HSP90AB2PQ58FF8 381 aa11.3□□□□□ -0.6
DNMT3A-212ENST00000482935 FAM196AQ6ZSG2 479 aa11.3□□□□□ -0.6
DNMT3A-212ENST00000482935 INSRP06213 1382 aa11.29□□□□□ -0.6
DNMT3A-212ENST00000482935 ANKRD26Q9UPS8 1709 aa11.29□□□□□ -0.6
DNMT3A-212ENST00000482935 IL2RBP14784 551 aa11.29□□□□□ -0.6
DNMT3A-212ENST00000482935 AMER1Q5JTC6 1135 aaPredicted RBP11.29□□□□□ -0.6
DNMT3A-212ENST00000482935 FAM208AQ9UK61 1670 aaKnown RBP11.28□□□□□ -0.6
DNMT3A-212ENST00000482935 EXOC5O00471 708 aa11.28□□□□□ -0.6
DNMT3A-212ENST00000482935 CC2D1BQ5T0F9 858 aaKnown RBP11.28□□□□□ -0.6
DNMT3A-212ENST00000482935 POLKQ9UBT6 870 aa11.28□□□□□ -0.6
DNMT3A-212ENST00000482935 PARP4Q9UKK3 1724 aaKnown RBP11.28□□□□□ -0.6
DNMT3A-212ENST00000482935 DISP2A7MBM2 1401 aa11.27□□□□□ -0.6
DNMT3A-212ENST00000482935 PEAK1Q9H792 1746 aa11.27□□□□□ -0.61
DNMT3A-212ENST00000482935 PER1O15534 1290 aaPredicted RBP11.27□□□□□ -0.61
DNMT3A-212ENST00000482935 CNGB1Q14028 1251 aaPredicted RBP11.27□□□□□ -0.61
DNMT3A-212ENST00000482935 NBPF6Q5VWK0 638 aa11.27□□□□□ -0.61
DNMT3A-212ENST00000482935 NBPF4Q96M43 638 aa11.27□□□□□ -0.61
DNMT3A-212ENST00000482935 LRRC37A3O60309 1634 aa11.27□□□□□ -0.61
DNMT3A-212ENST00000482935 WNK3Q9BYP7 1800 aa11.26□□□□□ -0.61
DNMT3A-212ENST00000482935 USHBP1Q8N6Y0 703 aa11.26□□□□□ -0.61
DNMT3A-212ENST00000482935 OVOS2A0A0G2JMS6 1433 aa11.26□□□□□ -0.61
DNMT3A-212ENST00000482935 TNS2Q63HR2 1409 aa11.26□□□□□ -0.61
DNMT3A-212ENST00000482935 TRIM37O94972 964 aa11.25□□□□□ -0.61
DNMT3A-212ENST00000482935 RAPGEF4Q8WZA2 1011 aa11.25□□□□□ -0.61
DNMT3A-212ENST00000482935 MAP2P11137 1827 aaKnown RBP11.25□□□□□ -0.61
DNMT3A-212ENST00000482935 BAG6P46379 1132 aa11.24□□□□□ -0.61
DNMT3A-212ENST00000482935 MARCH10Q8NA82 808 aaPredicted RBP11.24□□□□□ -0.61
DNMT3A-212ENST00000482935 NPC1L1Q9UHC9 1359 aa11.24□□□□□ -0.61
DNMT3A-212ENST00000482935 TATP17735 454 aaPredicted RBP11.23□□□□□ -0.61
DNMT3A-212ENST00000482935 EIF4A2Q14240 407 aaKnown RBP11.23□□□□□ -0.61
DNMT3A-212ENST00000482935 DEFB132Q7Z7B7 95 aa11.23□□□□□ -0.61
DNMT3A-212ENST00000482935 MEGF6O75095 1541 aa11.22□□□□□ -0.61
DNMT3A-212ENST00000482935 RGPD1P0DJD0 1748 aa11.22□□□□□ -0.61
DNMT3A-212ENST00000482935 RGPD2P0DJD1 1756 aa11.22□□□□□ -0.61
DNMT3A-212ENST00000482935 ZCRB1Q8TBF4 217 aaKnown RBP11.22□□□□□ -0.61
DNMT3A-212ENST00000482935 DDX54Q8TDD1 881 aaKnown RBP11.22□□□□□ -0.61
DNMT3A-212ENST00000482935 APBA3O96018 575 aa11.21□□□□□ -0.61
DNMT3A-212ENST00000482935 MTHFSP49914 203 aa11.21□□□□□ -0.61
DNMT3A-212ENST00000482935 EYA1Q99502 592 aa11.21□□□□□ -0.61
DNMT3A-212ENST00000482935 BCL9O00512 1426 aa11.2□□□□□ -0.62
DNMT3A-212ENST00000482935 EN1Q05925 392 aaPredicted RBP11.2□□□□□ -0.62
DNMT3A-212ENST00000482935 BCL11BQ9C0K0 894 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms