RNA–Protein interactions for RNA: ENST00000482598.1

PLXNA3-205, Transcript of plexin A3, humanhuman

TSL 3

Gene PLXNA3, Length 280 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-205ENST00000482598 GGNBP2Q9H3C7 697 aa24.73■■□□□ 1.55
PLXNA3-205ENST00000482598 RGPD5Q99666 1765 aa24.72■■□□□ 1.55
PLXNA3-205ENST00000482598 SOX12O15370 315 aa24.72■■□□□ 1.55
PLXNA3-205ENST00000482598 ONECUT3O60422 494 aaPredicted RBP24.71■■□□□ 1.55
PLXNA3-205ENST00000482598 NSD2O96028 1365 aa24.7■■□□□ 1.55
PLXNA3-205ENST00000482598 THSD7AQ9UPZ6 1657 aa24.7■■□□□ 1.54
PLXNA3-205ENST00000482598 AXIN2Q9Y2T1 843 aa24.7■■□□□ 1.54
PLXNA3-205ENST00000482598 SPATA31A1Q5TZJ5 1347 aa24.69■■□□□ 1.54
PLXNA3-205ENST00000482598 SOCS7O14512 581 aa24.69■■□□□ 1.54
PLXNA3-205ENST00000482598 BLMP54132 1417 aaPredicted RBP24.68■■□□□ 1.54
PLXNA3-205ENST00000482598 CRB1P82279 1406 aa24.68■■□□□ 1.54
PLXNA3-205ENST00000482598 ZBTB7CA1YPR0 619 aa24.67■■□□□ 1.54
PLXNA3-205ENST00000482598 STRN4Q9NRL3 753 aa24.67■■□□□ 1.54
PLXNA3-205ENST00000482598 RTL1A6NKG5 1358 aa24.67■■□□□ 1.54
PLXNA3-205ENST00000482598 LARP1Q6PKG0 1096 aaKnown RBP24.66■■□□□ 1.54
PLXNA3-205ENST00000482598 CCDC9Q9Y3X0 531 aaKnown RBP24.66■■□□□ 1.54
PLXNA3-205ENST00000482598 MAP3K19Q56UN5 1328 aa24.65■■□□□ 1.54
PLXNA3-205ENST00000482598 WDR17Q8IZU2 1322 aa24.65■■□□□ 1.54
PLXNA3-205ENST00000482598 EVA1CP58658 441 aa24.65■■□□□ 1.54
PLXNA3-205ENST00000482598 KIF24Q5T7B8 1368 aa24.65■■□□□ 1.54
PLXNA3-205ENST00000482598 PER1O15534 1290 aaPredicted RBP24.64■■□□□ 1.54
PLXNA3-205ENST00000482598 IP6K1Q92551 441 aa24.63■■□□□ 1.53
PLXNA3-205ENST00000482598 PEAK1Q9H792 1746 aa24.63■■□□□ 1.53
PLXNA3-205ENST00000482598 BRWD3Q6RI45 1802 aa24.63■■□□□ 1.53
PLXNA3-205ENST00000482598 FAM208AQ9UK61 1670 aaKnown RBP24.62■■□□□ 1.53
PLXNA3-205ENST00000482598 ERBB3P21860 1342 aa24.62■■□□□ 1.53
PLXNA3-205ENST00000482598 BARGINQ6ZT62 677 aa24.62■■□□□ 1.53
PLXNA3-205ENST00000482598 WNK3Q9BYP7 1800 aa24.62■■□□□ 1.53
PLXNA3-205ENST00000482598 FBLN1P23142 703 aa24.61■■□□□ 1.53
PLXNA3-205ENST00000482598 AMER1Q5JTC6 1135 aaPredicted RBP24.61■■□□□ 1.53
PLXNA3-205ENST00000482598 THRAP3Q9Y2W1 955 aaKnown RBP24.61■■□□□ 1.53
PLXNA3-205ENST00000482598 KNSTRNQ9Y448 316 aa24.61■■□□□ 1.53
PLXNA3-205ENST00000482598 FAM98CQ17RN3 349 aaKnown RBP24.6■■□□□ 1.53
PLXNA3-205ENST00000482598 SEPT12Q8IYM1 358 aa24.6■■□□□ 1.53
PLXNA3-205ENST00000482598 NPC1L1Q9UHC9 1359 aa24.59■■□□□ 1.53
PLXNA3-205ENST00000482598 HOXC9P31274 260 aa24.59■■□□□ 1.53
PLXNA3-205ENST00000482598 RRS1Q15050 365 aaKnown RBP24.59■■□□□ 1.53
PLXNA3-205ENST00000482598 TCP11L2Q8N4U5 519 aa24.59■■□□□ 1.53
PLXNA3-205ENST00000482598 PARP4Q9UKK3 1724 aaKnown RBP24.58■■□□□ 1.53
PLXNA3-205ENST00000482598 FLT4P35916 1363 aa24.57■■□□□ 1.52
PLXNA3-205ENST00000482598 MAP2P11137 1827 aaKnown RBP24.57■■□□□ 1.52
PLXNA3-205ENST00000482598 CARD10Q9BWT7 1032 aa24.57■■□□□ 1.52
PLXNA3-205ENST00000482598 SMG6Q86US8 1419 aaKnown RBP24.57■■□□□ 1.52
PLXNA3-205ENST00000482598 TOM1L2Q6ZVM7 507 aa24.56■■□□□ 1.52
PLXNA3-205ENST00000482598 DISP2A7MBM2 1401 aa24.55■■□□□ 1.52
PLXNA3-205ENST00000482598 AMPHP49418 695 aa24.55■■□□□ 1.52
PLXNA3-205ENST00000482598 ANKRD24Q8TF21 1146 aa24.55■■□□□ 1.52
PLXNA3-205ENST00000482598 INSRP06213 1382 aa24.54■■□□□ 1.52
PLXNA3-205ENST00000482598 CSB-PGBD3P0DP91 1061 aa24.53■■□□□ 1.52
PLXNA3-205ENST00000482598 USP35Q9P2H5 1018 aa24.53■■□□□ 1.52
PLXNA3-205ENST00000482598 LRRC37A3O60309 1634 aa24.53■■□□□ 1.52
PLXNA3-205ENST00000482598 EMILIN1Q9Y6C2 1016 aa24.52■■□□□ 1.52
PLXNA3-205ENST00000482598 POLKQ9UBT6 870 aa24.51■■□□□ 1.51
PLXNA3-205ENST00000482598 KRT27Q7Z3Y8 459 aa24.49■■□□□ 1.51
PLXNA3-205ENST00000482598 MORC1Q86VD1 984 aa24.49■■□□□ 1.51
PLXNA3-205ENST00000482598 CDCA7Q9BWT1 371 aaPredicted RBP24.49■■□□□ 1.51
PLXNA3-205ENST00000482598 RGPD2P0DJD1 1756 aa24.49■■□□□ 1.51
PLXNA3-205ENST00000482598 HSP90AB2PQ58FF8 381 aa24.48■■□□□ 1.51
PLXNA3-205ENST00000482598 A0A0G2JS52 829 aa24.47■■□□□ 1.51
PLXNA3-205ENST00000482598 MYT1Q01538 1121 aa24.47■■□□□ 1.51
PLXNA3-205ENST00000482598 EP400Q96L91 3159 aa24.47■■□□□ 1.51
PLXNA3-205ENST00000482598 UPF1Q92900 1129 aaKnown RBP eCLIP24.46■■□□□ 1.51
PLXNA3-205ENST00000482598 NLRP2Q9NX02 1062 aa24.46■■□□□ 1.51
PLXNA3-205ENST00000482598 NCAPD2Q15021 1401 aa24.45■■□□□ 1.51
PLXNA3-205ENST00000482598 TNNT2P45379 298 aaPredicted RBP24.44■■□□□ 1.5
PLXNA3-205ENST00000482598 LTV1Q96GA3 475 aaPredicted RBP24.43■■□□□ 1.5
PLXNA3-205ENST00000482598 TNS2Q63HR2 1409 aa24.43■■□□□ 1.5
PLXNA3-205ENST00000482598 CC2D1BQ5T0F9 858 aaKnown RBP24.42■■□□□ 1.5
PLXNA3-205ENST00000482598 NBPF6Q5VWK0 638 aa24.4■■□□□ 1.5
PLXNA3-205ENST00000482598 NBPF4Q96M43 638 aa24.4■■□□□ 1.5
PLXNA3-205ENST00000482598 PPM1GO15355 546 aaPredicted RBP24.39■■□□□ 1.49
PLXNA3-205ENST00000482598 IL2RBP14784 551 aa24.39■■□□□ 1.49
PLXNA3-205ENST00000482598 DDB1Q16531 1140 aa24.39■■□□□ 1.49
PLXNA3-205ENST00000482598 BCL9O00512 1426 aa24.38■■□□□ 1.49
PLXNA3-205ENST00000482598 PDE3BQ13370 1112 aa24.37■■□□□ 1.49
PLXNA3-205ENST00000482598 MEGF6O75095 1541 aa24.36■■□□□ 1.49
PLXNA3-205ENST00000482598 CCDC125Q86Z20 511 aa24.36■■□□□ 1.49
PLXNA3-205ENST00000482598 OVOS2A0A0G2JMS6 1433 aa24.35■■□□□ 1.49
PLXNA3-205ENST00000482598 RGPD1P0DJD0 1748 aa24.35■■□□□ 1.49
PLXNA3-205ENST00000482598 EIF4A2Q14240 407 aaKnown RBP24.35■■□□□ 1.49
PLXNA3-205ENST00000482598 SHANK3Q9BYB0 1731 aa24.35■■□□□ 1.49
PLXNA3-205ENST00000482598 FAM196AQ6ZSG2 479 aa24.34■■□□□ 1.49
PLXNA3-205ENST00000482598 TNS1Q9HBL0 1735 aaKnown RBP24.33■■□□□ 1.49
PLXNA3-205ENST00000482598 EXOC5O00471 708 aa24.33■■□□□ 1.49
PLXNA3-205ENST00000482598 PLEKHG2Q9H7P9 1386 aa24.32■■□□□ 1.48
PLXNA3-205ENST00000482598 FAM182BQ5T319 152 aa24.32■■□□□ 1.48
PLXNA3-205ENST00000482598 IGSF1Q8N6C5 1336 aa24.32■■□□□ 1.48
PLXNA3-205ENST00000482598 COL3A1P02461 1466 aaPredicted RBP24.32■■□□□ 1.48
PLXNA3-205ENST00000482598 SBF2Q86WG5 1849 aa24.31■■□□□ 1.48
PLXNA3-205ENST00000482598 MTHFSP49914 203 aa24.31■■□□□ 1.48
PLXNA3-205ENST00000482598 PKD1L3Q7Z443 1732 aa24.31■■□□□ 1.48
PLXNA3-205ENST00000482598 USHBP1Q8N6Y0 703 aa24.31■■□□□ 1.48
PLXNA3-205ENST00000482598 MARCH10Q8NA82 808 aaPredicted RBP24.31■■□□□ 1.48
PLXNA3-205ENST00000482598 EYA1Q99502 592 aa24.31■■□□□ 1.48
PLXNA3-205ENST00000482598 PARD3Q8TEW0 1356 aa24.3■■□□□ 1.48
PLXNA3-205ENST00000482598 DDX10Q13206 875 aaKnown RBP24.28■■□□□ 1.48
PLXNA3-205ENST00000482598 IL13P35225 146 aa24.27■■□□□ 1.48
PLXNA3-205ENST00000482598 RAPGEF4Q8WZA2 1011 aa24.26■■□□□ 1.47
PLXNA3-205ENST00000482598 KDRP35968 1356 aa24.26■■□□□ 1.47
PLXNA3-205ENST00000482598 TATP17735 454 aaPredicted RBP24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms