RNA–Protein interactions for RNA: ENST00000482050.1

DDR1-243, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-243ENST00000482050 LTN1O94822 1766 aa23.83■■□□□ 1.4
DDR1-243ENST00000482050 VPS72Q15906 364 aa23.82■■□□□ 1.4
DDR1-243ENST00000482050 AMER1Q5JTC6 1135 aaPredicted RBP23.82■■□□□ 1.4
DDR1-243ENST00000482050 COL18A1P39060 1754 aa23.82■■□□□ 1.4
DDR1-243ENST00000482050 MAP3K19Q56UN5 1328 aa23.82■■□□□ 1.4
DDR1-243ENST00000482050 RBM6P78332 1123 aaKnown RBP23.81■■□□□ 1.4
DDR1-243ENST00000482050 GJD4Q96KN9 370 aaPredicted RBP23.81■■□□□ 1.4
DDR1-243ENST00000482050 CC2D1BQ5T0F9 858 aaKnown RBP23.8■■□□□ 1.4
DDR1-243ENST00000482050 LARP1Q6PKG0 1096 aaKnown RBP23.8■■□□□ 1.4
DDR1-243ENST00000482050 COL5A2P05997 1499 aaPredicted RBP23.8■■□□□ 1.4
DDR1-243ENST00000482050 NSD2O96028 1365 aa23.79■■□□□ 1.4
DDR1-243ENST00000482050 AMPHP49418 695 aa23.79■■□□□ 1.4
DDR1-243ENST00000482050 MORC1Q86VD1 984 aa23.79■■□□□ 1.4
DDR1-243ENST00000482050 ANKRD26Q9UPS8 1709 aa23.79■■□□□ 1.4
DDR1-243ENST00000482050 RGPD5Q99666 1765 aa23.78■■□□□ 1.4
DDR1-243ENST00000482050 USP35Q9P2H5 1018 aa23.78■■□□□ 1.4
DDR1-243ENST00000482050 DDX10Q13206 875 aaKnown RBP23.77■■□□□ 1.4
DDR1-243ENST00000482050 GLI3P10071 1580 aa23.77■■□□□ 1.4
DDR1-243ENST00000482050 CSB-PGBD3P0DP91 1061 aa23.76■■□□□ 1.39
DDR1-243ENST00000482050 IP6K1Q92551 441 aa23.76■■□□□ 1.39
DDR1-243ENST00000482050 EMILIN1Q9Y6C2 1016 aa23.76■■□□□ 1.39
DDR1-243ENST00000482050 PPM1GO15355 546 aaPredicted RBP23.75■■□□□ 1.39
DDR1-243ENST00000482050 HOXC9P31274 260 aa23.75■■□□□ 1.39
DDR1-243ENST00000482050 LTV1Q96GA3 475 aaPredicted RBP23.75■■□□□ 1.39
DDR1-243ENST00000482050 SPATA31A5Q5VU36 1347 aa23.75■■□□□ 1.39
DDR1-243ENST00000482050 SPATA31A7Q8IWB4 1347 aa23.75■■□□□ 1.39
DDR1-243ENST00000482050 ABCC6O95255 1503 aa23.74■■□□□ 1.39
DDR1-243ENST00000482050 TOM1L2Q6ZVM7 507 aa23.74■■□□□ 1.39
DDR1-243ENST00000482050 ANKRD24Q8TF21 1146 aa23.73■■□□□ 1.39
DDR1-243ENST00000482050 SPATA31A1Q5TZJ5 1347 aa23.73■■□□□ 1.39
DDR1-243ENST00000482050 FAM98CQ17RN3 349 aaKnown RBP23.72■■□□□ 1.39
DDR1-243ENST00000482050 WDR17Q8IZU2 1322 aa23.72■■□□□ 1.39
DDR1-243ENST00000482050 RGS12O14924 1447 aa23.72■■□□□ 1.39
DDR1-243ENST00000482050 PEAK1Q9H792 1746 aa23.71■■□□□ 1.39
DDR1-243ENST00000482050 BLMP54132 1417 aaPredicted RBP23.71■■□□□ 1.39
DDR1-243ENST00000482050 RTL1A6NKG5 1358 aa23.71■■□□□ 1.39
DDR1-243ENST00000482050 ERBB3P21860 1342 aa23.71■■□□□ 1.39
DDR1-243ENST00000482050 A0A0G2JS52 829 aa23.71■■□□□ 1.39
DDR1-243ENST00000482050 ZNF316A6NFI3 1004 aaPredicted RBP23.71■■□□□ 1.39
DDR1-243ENST00000482050 MYT1Q01538 1121 aa23.71■■□□□ 1.39
DDR1-243ENST00000482050 POLKQ9UBT6 870 aa23.71■■□□□ 1.39
DDR1-243ENST00000482050 CRB1P82279 1406 aa23.7■■□□□ 1.38
DDR1-243ENST00000482050 FLT4P35916 1363 aa23.69■■□□□ 1.38
DDR1-243ENST00000482050 HSP90AB2PQ58FF8 381 aa23.69■■□□□ 1.38
DDR1-243ENST00000482050 CDK12Q9NYV4 1490 aaPredicted RBP23.68■■□□□ 1.38
DDR1-243ENST00000482050 NPC1L1Q9UHC9 1359 aa23.68■■□□□ 1.38
DDR1-243ENST00000482050 NLRP2Q9NX02 1062 aa23.68■■□□□ 1.38
DDR1-243ENST00000482050 MAP2P11137 1827 aaKnown RBP23.68■■□□□ 1.38
DDR1-243ENST00000482050 SEPT12Q8IYM1 358 aa23.67■■□□□ 1.38
DDR1-243ENST00000482050 TCP11L2Q8N4U5 519 aa23.67■■□□□ 1.38
DDR1-243ENST00000482050 INSRP06213 1382 aa23.65■■□□□ 1.38
DDR1-243ENST00000482050 KIF24Q5T7B8 1368 aa23.65■■□□□ 1.38
DDR1-243ENST00000482050 CARD10Q9BWT7 1032 aa23.64■■□□□ 1.37
DDR1-243ENST00000482050 ONECUT3O60422 494 aaPredicted RBP23.62■■□□□ 1.37
DDR1-243ENST00000482050 SMG6Q86US8 1419 aaKnown RBP23.61■■□□□ 1.37
DDR1-243ENST00000482050 BARGINQ6ZT62 677 aa23.61■■□□□ 1.37
DDR1-243ENST00000482050 THRAP3Q9Y2W1 955 aaKnown RBP23.61■■□□□ 1.37
DDR1-243ENST00000482050 MTHFSP49914 203 aa23.59■■□□□ 1.37
DDR1-243ENST00000482050 USHBP1Q8N6Y0 703 aa23.59■■□□□ 1.37
DDR1-243ENST00000482050 RGPD2P0DJD1 1756 aa23.58■■□□□ 1.37
DDR1-243ENST00000482050 THSD7AQ9UPZ6 1657 aa23.58■■□□□ 1.37
DDR1-243ENST00000482050 NBPF6Q5VWK0 638 aa23.58■■□□□ 1.37
DDR1-243ENST00000482050 NBPF4Q96M43 638 aa23.58■■□□□ 1.37
DDR1-243ENST00000482050 FAM208AQ9UK61 1670 aaKnown RBP23.57■■□□□ 1.36
DDR1-243ENST00000482050 BRWD3Q6RI45 1802 aa23.56■■□□□ 1.36
DDR1-243ENST00000482050 EIF4A2Q14240 407 aaKnown RBP23.56■■□□□ 1.36
DDR1-243ENST00000482050 KRT27Q7Z3Y8 459 aa23.55■■□□□ 1.36
DDR1-243ENST00000482050 DISP2A7MBM2 1401 aa23.53■■□□□ 1.36
DDR1-243ENST00000482050 PPP2R1AP30153 589 aa23.53■■□□□ 1.36
DDR1-243ENST00000482050 FAM182BQ5T319 152 aa23.53■■□□□ 1.36
DDR1-243ENST00000482050 WNK3Q9BYP7 1800 aa23.52■■□□□ 1.36
DDR1-243ENST00000482050 IL2RBP14784 551 aa23.52■■□□□ 1.36
DDR1-243ENST00000482050 PARD3Q8TEW0 1356 aa23.52■■□□□ 1.36
DDR1-243ENST00000482050 PDE3BQ13370 1112 aa23.51■■□□□ 1.35
DDR1-243ENST00000482050 DDB1Q16531 1140 aa23.51■■□□□ 1.35
DDR1-243ENST00000482050 EYA1Q99502 592 aa23.51■■□□□ 1.35
DDR1-243ENST00000482050 CDCA7Q9BWT1 371 aaPredicted RBP23.51■■□□□ 1.35
DDR1-243ENST00000482050 PARP4Q9UKK3 1724 aaKnown RBP23.5■■□□□ 1.35
DDR1-243ENST00000482050 LRRC37A3O60309 1634 aa23.49■■□□□ 1.35
DDR1-243ENST00000482050 SOCS7O14512 581 aa23.47■■□□□ 1.35
DDR1-243ENST00000482050 IL13P35225 146 aa23.47■■□□□ 1.35
DDR1-243ENST00000482050 MEGF6O75095 1541 aa23.47■■□□□ 1.35
DDR1-243ENST00000482050 EXOC5O00471 708 aa23.46■■□□□ 1.35
DDR1-243ENST00000482050 RALBP1Q15311 655 aa23.46■■□□□ 1.35
DDR1-243ENST00000482050 RAPGEF4Q8WZA2 1011 aa23.46■■□□□ 1.35
DDR1-243ENST00000482050 DIAPH1O60610 1272 aaKnown RBP23.45■■□□□ 1.34
DDR1-243ENST00000482050 IGSF1Q8N6C5 1336 aa23.44■■□□□ 1.34
DDR1-243ENST00000482050 TATP17735 454 aaPredicted RBP23.44■■□□□ 1.34
DDR1-243ENST00000482050 CFAP53Q96M91 514 aa23.44■■□□□ 1.34
DDR1-243ENST00000482050 COL3A1P02461 1466 aaPredicted RBP23.43■■□□□ 1.34
DDR1-243ENST00000482050 TNS2Q63HR2 1409 aa23.43■■□□□ 1.34
DDR1-243ENST00000482050 NCAPD2Q15021 1401 aa23.42■■□□□ 1.34
DDR1-243ENST00000482050 AEBP1Q8IUX7 1158 aa23.42■■□□□ 1.34
DDR1-243ENST00000482050 MARCH10Q8NA82 808 aaPredicted RBP23.42■■□□□ 1.34
DDR1-243ENST00000482050 OVOS2A0A0G2JMS6 1433 aa23.42■■□□□ 1.34
DDR1-243ENST00000482050 DDX54Q8TDD1 881 aaKnown RBP23.41■■□□□ 1.34
DDR1-243ENST00000482050 U2SURPO15042 1029 aaKnown RBP23.4■■□□□ 1.34
DDR1-243ENST00000482050 SULT6B1Q6IMI4 303 aa23.4■■□□□ 1.34
DDR1-243ENST00000482050 UPF1Q92900 1129 aaKnown RBP eCLIP23.4■■□□□ 1.34
DDR1-243ENST00000482050 PRKRIP1Q9H875 184 aaPredicted RBP23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms