RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 RSPH6AQ9H0K4 717 aa6.75□□□□□ -1.33
KDM1A-204ENST00000481879 IRS1P35568 1242 aa6.74□□□□□ -1.33
KDM1A-204ENST00000481879 SH3BP5LQ7L8J4 393 aa6.74□□□□□ -1.33
KDM1A-204ENST00000481879 TRMT44Q8IYL2 757 aaKnown RBP6.74□□□□□ -1.33
KDM1A-204ENST00000481879 POLR3EQ9NVU0 708 aa6.74□□□□□ -1.33
KDM1A-204ENST00000481879 MAP4K5Q9Y4K4 846 aa6.74□□□□□ -1.33
KDM1A-204ENST00000481879 MAGEB6P1A0A0J9YX57 407 aa6.73□□□□□ -1.33
KDM1A-204ENST00000481879 FSHRP23945 695 aa6.73□□□□□ -1.33
KDM1A-204ENST00000481879 LINC00528Q8N1L1 170 aa6.73□□□□□ -1.33
KDM1A-204ENST00000481879 MEIOBQ8N635 442 aa6.73□□□□□ -1.33
KDM1A-204ENST00000481879 GPKOWQ92917 476 aaPredicted RBP eCLIP6.73□□□□□ -1.332e-9■■□□□ 14.4
KDM1A-204ENST00000481879 EMILIN1Q9Y6C2 1016 aa6.72□□□□□ -1.33
KDM1A-204ENST00000481879 SOS2Q07890 1332 aaPredicted RBP6.72□□□□□ -1.33
KDM1A-204ENST00000481879 PPFIA3O75145 1194 aa6.71□□□□□ -1.34
KDM1A-204ENST00000481879 CTDSPL2Q05D32 466 aa6.71□□□□□ -1.34
KDM1A-204ENST00000481879 CCDC116Q8IYX3 515 aa6.71□□□□□ -1.34
KDM1A-204ENST00000481879 TSEN34Q9BSV6 310 aaKnown RBP6.71□□□□□ -1.34
KDM1A-204ENST00000481879 CARD14Q9BXL6 1004 aa6.71□□□□□ -1.34
KDM1A-204ENST00000481879 KRT76Q01546 638 aa6.7□□□□□ -1.34
KDM1A-204ENST00000481879 LCE3BQ5TA77 95 aa6.7□□□□□ -1.34
KDM1A-204ENST00000481879 KANK3Q6NY19 840 aa6.7□□□□□ -1.34
KDM1A-204ENST00000481879 ERFEQ4G0M1 354 aa6.69□□□□□ -1.34
KDM1A-204ENST00000481879 PDXDC2PQ6P474 469 aa6.69□□□□□ -1.34
KDM1A-204ENST00000481879 DNMT3LQ9UJW3 386 aa6.69□□□□□ -1.34
KDM1A-204ENST00000481879 Q8N3U1 123 aa6.68□□□□□ -1.34
KDM1A-204ENST00000481879 ARHGAP9Q9BRR9 750 aa6.68□□□□□ -1.34
KDM1A-204ENST00000481879 PGPEP1Q9NXJ5 209 aa6.68□□□□□ -1.34
KDM1A-204ENST00000481879 FKBPLQ9UIM3 349 aa6.68□□□□□ -1.34
KDM1A-204ENST00000481879 TTLL8A6PVC2 850 aa6.67□□□□□ -1.34
KDM1A-204ENST00000481879 SKIV2LQ15477 1246 aaKnown RBP6.67□□□□□ -1.34
KDM1A-204ENST00000481879 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.67□□□□□ -1.343e-18■■■■□ 20
KDM1A-204ENST00000481879 PPP1R26Q5T8A7 1209 aaPredicted RBP6.67□□□□□ -1.34
KDM1A-204ENST00000481879 LRRN4Q8WUT4 740 aa6.67□□□□□ -1.34
KDM1A-204ENST00000481879 ZNF385CQ66K41 422 aaPredicted RBP6.66□□□□□ -1.34
KDM1A-204ENST00000481879 Q6ZVU0 165 aa6.66□□□□□ -1.34
KDM1A-204ENST00000481879 ZBTB33Q86T24 672 aa6.66□□□□□ -1.34
KDM1A-204ENST00000481879 CNTNAP3BQ96NU0 1288 aa6.66□□□□□ -1.34
KDM1A-204ENST00000481879 KCTD15Q96SI1 283 aaPredicted RBP6.66□□□□□ -1.34
KDM1A-204ENST00000481879 CNTNAP3Q9BZ76 1288 aa6.66□□□□□ -1.34
KDM1A-204ENST00000481879 CDV3Q9UKY7 258 aaKnown RBP6.66□□□□□ -1.34
KDM1A-204ENST00000481879 FIGNL2A6NMB9 653 aa6.65□□□□□ -1.34
KDM1A-204ENST00000481879 MSTNO14793 375 aa6.65□□□□□ -1.34
KDM1A-204ENST00000481879 DHX9Q08211 1270 aaKnown RBP6.65□□□□□ -1.34
KDM1A-204ENST00000481879 CBLBQ13191 982 aa6.65□□□□□ -1.34
KDM1A-204ENST00000481879 NR6A1Q15406 480 aa6.65□□□□□ -1.34
KDM1A-204ENST00000481879 SLC10A4Q96EP9 437 aa6.65□□□□□ -1.34
KDM1A-204ENST00000481879 ATP1B4Q9UN42 357 aaPredicted RBP6.65□□□□□ -1.34
KDM1A-204ENST00000481879 SPINT1O43278 529 aa6.64□□□□□ -1.35
KDM1A-204ENST00000481879 PTSQ03393 145 aa6.64□□□□□ -1.35
KDM1A-204ENST00000481879 PTK2Q05397 1052 aa6.64□□□□□ -1.35
KDM1A-204ENST00000481879 SVOPQ8N4V2 548 aa6.64□□□□□ -1.35
KDM1A-204ENST00000481879 PROCA1Q8NCQ7 364 aaPredicted RBP6.64□□□□□ -1.35
KDM1A-204ENST00000481879 ZC3H4Q9UPT8 1303 aaKnown RBP6.64□□□□□ -1.35
KDM1A-204ENST00000481879 SH3D19Q5HYK7 790 aa6.63□□□□□ -1.35
KDM1A-204ENST00000481879 FBXO31Q5XUX0 539 aaPredicted RBP6.63□□□□□ -1.35
KDM1A-204ENST00000481879 PPP2R2DQ66LE6 453 aa6.63□□□□□ -1.35
KDM1A-204ENST00000481879 GPR161Q8N6U8 529 aaKnown RBP6.63□□□□□ -1.35
KDM1A-204ENST00000481879 SPOCK3Q9BQ16 436 aa6.63□□□□□ -1.35
KDM1A-204ENST00000481879 ARHGEF15O94989 841 aa6.62□□□□□ -1.35
KDM1A-204ENST00000481879 DDRGK1Q96HY6 314 aa6.62□□□□□ -1.35
KDM1A-204ENST00000481879 KRTAP4-12Q9BQ66 201 aa6.62□□□□□ -1.35
KDM1A-204ENST00000481879 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.62□□□□□ -1.35
KDM1A-204ENST00000481879 GPSM3Q9Y4H4 160 aa6.62□□□□□ -1.35
KDM1A-204ENST00000481879 AP1G2O75843 785 aa6.61□□□□□ -1.35
KDM1A-204ENST00000481879 MARSP56192 900 aaKnown RBP6.61□□□□□ -1.35
KDM1A-204ENST00000481879 INTS6LQ5JSJ4 861 aaKnown RBP6.61□□□□□ -1.35
KDM1A-204ENST00000481879 CCDC155Q8N6L0 562 aa6.61□□□□□ -1.35
KDM1A-204ENST00000481879 SCARF2Q96GP6 870 aaPredicted RBP6.61□□□□□ -1.35
KDM1A-204ENST00000481879 AGBL1Q96MI9 1066 aa6.61□□□□□ -1.35
KDM1A-204ENST00000481879 OCSTAMPQ9BR26 566 aa6.61□□□□□ -1.35
KDM1A-204ENST00000481879 FAM117AQ9C073 453 aa6.61□□□□□ -1.35
KDM1A-204ENST00000481879 KDM4CQ9H3R0 1056 aa6.61□□□□□ -1.35
KDM1A-204ENST00000481879 SLC35F4A4IF30 521 aa6.6□□□□□ -1.35
KDM1A-204ENST00000481879 BTBD11A6QL63 1104 aa6.6□□□□□ -1.35
KDM1A-204ENST00000481879 PLA2G4EQ3MJ16 856 aa6.6□□□□□ -1.35
KDM1A-204ENST00000481879 PNMA1Q8ND90 353 aa6.6□□□□□ -1.35
KDM1A-204ENST00000481879 ADAM32Q8TC27 787 aa6.6□□□□□ -1.35
KDM1A-204ENST00000481879 WHAMMQ8TF30 809 aa6.6□□□□□ -1.35
KDM1A-204ENST00000481879 NANOS1Q8WY41 292 aaKnown RBP6.6□□□□□ -1.35
KDM1A-204ENST00000481879 KRTAP9-9Q9BYP9 154 aa6.6□□□□□ -1.35
KDM1A-204ENST00000481879 KRTAP9-4Q9BYQ2 154 aa6.6□□□□□ -1.35
KDM1A-204ENST00000481879 GPBP1L1Q9HC44 474 aaPredicted RBP6.6□□□□□ -1.35
KDM1A-204ENST00000481879 ITGB2P05107 769 aa6.59□□□□□ -1.35
KDM1A-204ENST00000481879 RELBQ01201 579 aa6.59□□□□□ -1.35
KDM1A-204ENST00000481879 K7ELQ4 463 aaPredicted RBP6.58□□□□□ -1.36
KDM1A-204ENST00000481879 CTSOP43234 321 aaPredicted RBP6.58□□□□□ -1.36
KDM1A-204ENST00000481879 NBPF20Q3BBV1 942 aa6.58□□□□□ -1.36
KDM1A-204ENST00000481879 EPS8L1Q8TE68 723 aa6.58□□□□□ -1.36
KDM1A-204ENST00000481879 INSM2Q96T92 566 aaPredicted RBP6.58□□□□□ -1.36
KDM1A-204ENST00000481879 COL25A1Q9BXS0 654 aaPredicted RBP6.58□□□□□ -1.36
KDM1A-204ENST00000481879 POLMQ9NP87 494 aaPredicted RBP6.58□□□□□ -1.36
KDM1A-204ENST00000481879 TMPRSS4Q9NRS4 437 aa6.58□□□□□ -1.36
KDM1A-204ENST00000481879 PROCP04070 461 aa6.57□□□□□ -1.36
KDM1A-204ENST00000481879 DZIP3Q86Y13 1208 aaKnown RBP6.57□□□□□ -1.36
KDM1A-204ENST00000481879 VWA5B2Q8N398 1253 aa6.57□□□□□ -1.36
KDM1A-204ENST00000481879 ZNF395Q9H8N7 513 aaPredicted RBP6.57□□□□□ -1.36
KDM1A-204ENST00000481879 SLURP2P0DP57 97 aa6.56□□□□□ -1.36
KDM1A-204ENST00000481879 ITGA6P23229 1130 aa6.56□□□□□ -1.36
KDM1A-204ENST00000481879 RAB15P59190 212 aa6.56□□□□□ -1.36
KDM1A-204ENST00000481879 SV2AQ7L0J3 742 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms